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United States Department of Agriculture

Agricultural Research Service

About the database

DGIL Porcine Translational Research Database

PINdb

Current Statistics (10/15/2014)

 

 

Gene entries

 

6,851

Full-length RNA transcripts (full 5’ and 3’)

4,058

 

Genes

 

3,840

 

% of genome

17.8%

 

Splice variants

218

Full-length protein sequences

4,916

 

% of genome

22.7%

Error notations (# of entries)

2,349

 

Artifactually duplicated genes

560

 

Missing genes (Ensembl 10.2)

752

Real-time PCR Assays

2,212

 

Taqman

 

1,852

 

SYBR Green

349

Antibodies (# entries)

546

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This database contains functional information on genes commonly studied in humans, pigs, and rodents, including more than 2,300 sequenced at DGIL. Each entry has been manually-annotated and is linked to other porcine databases as well as Homologene, InnateDb and Gene Ontology Annotations.

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Disclaimer

This database is currently in a beta version, there are some incomplete annotations. We cannot guarantee the performance of the antibodies or PCR assays that have not been tested in our lab under conditions not specified in the published literature.

Updated

10/16/2014


Last Modified: 10/16/2014