Page Banner

United States Department of Agriculture

Agricultural Research Service

Related Topics

Darrell Bayles
National Animal Disease Center
Biologist

Phone: (515) 337-7165
Fax: (515) 337-7149
Room 1509
1920 DAYTON AVE
AMES, IA, 50010

Projects
CONTROL, IMMUNOLOGY AND GENOMICS OF SPIROCHETE DISEASES
Appropriated (D)
  Accession Number: 422153

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Draft genome sequence of the Bordetella bronchiseptica swine isolate KM22 - (Peer Reviewed Journal)
Nicholson, T.L., Shore, S., Bayles, D.O., Register, K.B., Kingsley, R.A. 2014. Draft genome sequence of the Bordetella bronchiseptica swine isolate KM22. Genome Announcements. 2(4). pii: e00670-14. doi: 10.1128/genomeA.00670-14.
Simultaneous rapid sequencing of multiple RNA virus genomes - (Peer Reviewed Journal)
Neill, J.D., Bayles, D.O., Ridpath, J.F. 2014. Simultaneous rapid sequencing of multiple RNA virus genomes. Journal of Virological Methods. 201:68-72. DOI: 10.1016/j.viromet.2014.02.016.
Bacteria, phages, and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations Reprint Icon - (Peer Reviewed Journal)
Looft, T.P., Allen, H.K., Cantarel, B., Levine, U.Y., Bayles, D.O., Alt, D.P., Henrissat, B., Stanton, T.B. 2014. Bacteria, phages, and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations. Journal of the International Society for Microbial Ecology. 8(8):1566-1576. DOI: 10.1038/ismej.2014.12.
Draft genome sequence of a Mycobacterium avium complex isolate from a broadbill bird Reprint Icon - (Peer Reviewed Journal)
Bannantine, J.P., Bayles, D.O., Robbe-Austerman, S., Burrell, A.M., Stabel, J.R. 2014. Draft genome sequence of a Mycobacterium avium complex isolate from a broadbill bird. Genome Announcements. 2(1):1.
Biochemical and molecular characterization of Treponema phagedenis-like spirochetes isolated from a bovine digital dermatitis lesion Reprint Icon - (Peer Reviewed Journal)
Wilson-Welder, J.H., Elliott, M.K., Zuerner, R.L., Bayles, D.O., Alt, D.P., Stanton, T.B. 2013. Biochemical and molecular characterization of Treponema phagedenis-like spirochetes isolated from a bovine digital dermatitis lesion. BMC Microbiology. 13:280. Available: http://www.biomedcentral.com/content/pdf/1471-2180-13-280.pdf.
Genome sequences of Mannheimia haemolytica serotype A1 strains D153 and D193 from bovine pneumonia - (Peer Reviewed Journal)
Hauglund, M.J., Tatum, F.M., Bayles, D.O., Maheswaran, S.K., Briggs, R.E. 2013. Genome sequences of Mannheimia haemolytica serotype A1 strains D153 and D193 from bovine pneumonia. Genome Announcements. 1(5). DOI: 10.1128/genomeA.00848-13.
Dynamic phages in the swine gut ecosystem - (Abstract Only)
Allen, H.K., Looft, T.P., Bayles, D.O., Alt, D.P., Stanton, T.B. 2013. Dynamic phages in the swine gut ecosystem [abstract]. Molecular Genetics of Bacteria and Phage Meeting. p. 94.
The agricultural antibiotic carbadox induces generalized transducing phage in multidrug-resistant Salmonella enterica serovar Typhimurium DT104 - (Abstract Only)
Bearson, B.L., Brunelle, B.W., Allen, H.K., Bayles, D.O., Stanton, T.B. 2013. The agricultural antibiotic carbadox induces generalized transducing phage in multidrug-resistant Salmonella enterica serovar Typhimurium DT104. Abstracts of the 2013 Molecular Genetics of Bacteria and Phages Meeting, August 6-10, 2013, Madison, Wisconsin. p. 95.
Porcine granulocyte-colony stimulating factor (G-CSF) delivered via replication-defective adenovirus induces a sustained increase in circulating peripheral blood neutrophils - (Peer Reviewed Journal)
Loving, C.L., Kehrli, M.E., Brockmeier, S.L., Bayles, D.O., Michael, D.D., Schlink, S.N., Lager, K.M. 2013. Porcine granulocyte-colony stimulating factor (G-CSF) delivered via replication-defective adenovirus induces a sustained increase in circulating peripheral blood neutrophils. Biologicals. Available: http://dx.doi.org/10.1016/j.biologicals.2013.07.001.
Gene expression changes in the swine microbiota with the in-feed antibiotic carbadox - (Abstract Only)
Looft, T.P., Allen, H.K., Severin, A., Levine, U.Y., Bayles, D.O., Alt, D.P., Stanton, T.B. 2013. Gene expression changes in the swine microbiota with the in-feed antibiotic carbadox. [abstract]. 113th General Meeting, American Society for Microbiology. p. 200.
A divergent clade of circular single-stranded DNA viruses from pig feces - (Peer Reviewed Journal)
Cheung, A.K., Ng, T.F., Lager, K.M., Bayles, D.O., Alt, D.P., Delwart, E.L., Pogranichniy, R.M., Kehrli, Jr., M.E. 2013. A divergent clade of circular single-stranded DNA viruses from pig feces. Archives of Virology. 158(10):2157-2162.
Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host Reprint Icon - (Peer Reviewed Journal)
Bearson, S.M., Allen, H.K., Bearson, B.L., Looft, T.P., Brunelle, B.W., Kich, J.D., Tuggle, C.K., Bayles, D.O., Alt, D.P., Levine, U.Y., Stanton, T.B. 2013. Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host. Infection, Genetics and Evolution. 16:330-340.
The agricultural antibiotic carbadox induces prophage and antibiotic resistance gene transfer in multidrug-resistant salmonella enterica serovar typhimurium DT104 - (Abstract Only)
Bearson, B.L., Brunelle, B.W., Allen, H.K., Bayles, D.O., Stanton, T.B. 2013. The agricultural antibiotic carbadox induces prophage and antibiotic resistance gene transfer in multidrug-resistant salmonella enterica serovar typhimurium DT104. Abstracts of the 113th General Meeting of the American Society for Microbiology, May 18-21, 2013, Denver, Colorado. Paper No. #M-1103.
Pathogenicity and transmission of the novel A (H3N2v) influenza virus isolated from humans in experimentally inoculated pigs - (Abstract Only) - (15-Feb-13)
Draft genome sequences of two virulent serotypes of avian Pasteurella multocida - (Peer Reviewed Journal)
Abrahante, J.E., Johnson, T.J., Hunter, S.S., Maheswaran, S.K., Hauglund, M.J., Bayles, D.O., Tatum, F.M., Briggs, R.E. 2013. Draft genome sequences of two virulent serotypes of avian Pasteurella multocida. Genome Announcements. 1(1):e00058. DOI:10.1128/genomeA.00058-12.
A curated public database for multilocus sequence typing (MLST) and analysis of Haemophilus parasuis based on an optimized typing scheme - (Peer Reviewed Journal)
Mullins, M., Register, K.B., Brunelle, B.W., Aragon, V., Galofre-Mila, N., Bayles, D.O., Jolley, K.A. 2013. A curated public database for multilocus sequence typing (MLST) and analysis of Haemophilus parasuis based on an optimized typing scheme. Veterinary Microbiology. 162(2-4):899-906.
Estimation of viral richness from shotgun metagenomes using a frequency count approach Reprint Icon - (Peer Reviewed Journal)
Allen, H.K., Bunge, J., Foster, J.A., Bayles, D.O., Stanton, T.B. 2013. Estimation of viral richness from shotgun metagenomes using a frequency count approach. BMC Microbiome. 1(5). Available: http://www.microbiomejournal.com/content/1/1/5.
Swine tracheobronchial lymph node mRNA responses in swine infected with a highly pathogenic strain of porcine reproductive and respiratory syndrome virus - (Abstract Only)
Miller, L.C., Fleming, D., Arbogast, A., Bayles, D.O., Guo, B., Lager, K.M., Henningson, J.N., Schlink, S.N., Yang, H., Faaberg, K.S., Kehrli, Jr., M.E. 2012. Swine tracheobronchial lymph node mRNA responses in swine infected with a highly pathogenic strain of porcine reproductive and respiratory syndrome virus. 2012 International PRRS Symposium. p. 96.
Diversity of viruses detected by deep sequencing in pigs from a common background - (Peer Reviewed Journal)
Lager, K.M., Ng, T.F., Bayles, D.O., Alt, D.P., Delwart, E.L., Cheung, A.K. 2012. Diversity of viruses detected by deep sequencing in pigs from a common background. Journal of Veterinary Diagnostic Investigation. 24(6):1177-1179.
Analysis of the swine tracheobronchial lymphnode transcriptomic response to infection with a Chinese highly pathogenic strain of porcine reproductive and respiratory syndrome virus - (Peer Reviewed Journal)
Miller, L.C., Fleming, D., Arbogast, A., Bayles, D.O., Guo, B., Lager, K.M., Henningson, J.N., Schlink, S.N., Yang, H.-C., Faaberg, K.S., Kehrli, Jr., M.E. 2012. Analysis of the swine tracheobronchial lymph node transcriptomic response to infection with a Chinese highly pathogenic strain of porcine reproductive and respiratory syndrome virus. BioMed Central (BMC) Veterinary Research. 8(1):208. Available: http://www.biomedcentral.com/1746-6148/8/208.
Analysis of the swine tracheobronchial lymphnode transcriptomic response to infection with a Chinese highly pathogenic strain of porcine reproductive and respiratory syndrome virus - (Abstract Only) - (15-Aug-12)
Comparison of 2010-2011 H3N2 influenza A viruses isolated from swine and the A(H3N2)v isolated from humans in 2011 - (Abstract Only)
Kitikoon, P., Vincent, A.L., Gauger, P., Schlink, S.N., Bayles, D.O., Gramer, M., Darnell, D., Webby, R., Lager, K.M., Swenson, S., Klimov, A. 2012. Comparison of 2010-2011 H3N2 influenza A viruses isolated from swine and the A(H3N2)v isolated from humans in 2011 [abstract]. American Society for Virology 31st Annual Meeting. p. 102.
Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the porcine host - (Abstract Only)
Bearson, S.M., Allen, H.K., Bearson, B.L., Looft, T.P., Brunelle, B.W., Kich, J.D., Bayles, D.O., Alt, D.P., Levine, U.Y., Stanton, T.B. 2012. Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the porcine host [abstract]. American Society for Microbiology General Meeting, June 16-19, 2012, San Francisco, California. p. 3150.
Pathogenicity and transmission in pigs of the novel A(H3N2)v influenza virus isolated from humans and characterization of swine H3N2 viruses isolated in 2010-2011 - (Peer Reviewed Journal)
Kitikoon, P., Vincent, A.L., Gauger, P.C., Schlink, S.N., Bayles, D.O., Gramer, M.R., Darnell, D., Webby, R.J., Lager, K.M., Swenson, S.L., Klimov, A. 2012. Pathogenicity and transmission in pigs of the novel A(H3N2)v influenza virus isolated from humans and characterization of swine H3N2 viruses isolated in 2010-2011. Journal of Virology. 86(12):6804-6814.
Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offer insights into host association - (Peer Reviewed Journal)
Bannantine, J.P., Wu, C., Hsu, C., Zhou, S., Schwartz, D.C., Bayles, D.O., Paustian, M.L., Alt, D.P., Sreevatsan, S., Kapur, V., Talaat, A.M. 2012. Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association. Biomed Central (BMC) Genomics. 13:89. Available: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3337245/pdf/1471-2164-13-89.pdf.
DNA sequence and analysis of a 90.1 kb virulence plasmid in shiga toxin-producing Escherichia coli (STEC) O145:NM 83-75 - (Peer Reviewed Journal)
Yan, X., Fratamico, P.M., Needleman, D.S., Bayles, D.O. 2012. DNA sequence and analysis of a 90.1 kb virulence plasmid in shiga toxin-producing Escherichia coli (STEC) O145:NM 83-75. Plasmid Journal. 68:25-32.
In-feed antibiotic effects on the swine intestinal microbiome - (Peer Reviewed Journal)
Looft, T.P., Johnson, T., Allen, H.K., Bayles, D.O., Alt, D.P., Cole, J., Hashsham, S., Stedtfeld, R., Stedtfeld, T., Chai, B., Tiedje, J., Stanton, T.B. 2012. In-feed antibiotic effects on the swine intestinal microbiome. Proceedings of the National Academy of Sciences. 109(5):1691-1696.
Antibiotics in feed induce prophages in swine fecal microbiomes - (Peer Reviewed Journal)
Allen, H.K., Looft, T.P., Bayles, D.O., Humphrey, S.B., Levine, U.Y., Alt, D.P., Stanton, T.B. 2011. Antibiotics in feed induce prophages in swine fecal microbiomes. mBio [serial online]. 2(6). Available: http://mbio.asm.org/content/2/6/e00260-11.
Genome sequence of Haemophilus parasuis strain 29755 - (Peer Reviewed Journal)
Mullins, M.A., Register, K.B., Bayles, D.O., Dyer, D.W., Kuehn, J.S., Phillips, G.J. 2011. Genome sequence of Haemophilus parasuis strain 29755. Standards in Genomic Sciences. 5(1):61-68.
Large scale parallel pyrosequencing technology: PRRSV strain VR-2332 nsp2 deletion mutant stability in swine - (Peer Reviewed Journal)
Guo, B., Vorwald, A.C., Alt, D.P., Lager, K.M., Bayles, D.O., Faaberg, K.S. 2011. Large scale parallel pyrosequencing technology: PRRSV strain VR-2332 nsp2 deletion mutant stability in swine. Virus Research. 161(2):162-169.
The application and performance of single nucleotide polymorphism markers for population genetic analyses of Lepidoptera - (Peer Reviewed Journal)
Coates, B.S., Bayles, D.O., Wanner, K.W., Robertson, H.M., Hellmich II, R.L., Sappington, T.W. 2011. The application and performance of single nucleotide polymorphism markers for population genetic analyses of Lepidoptera. Frontiers in Genetics. 2(38):1-10.
Haemophilus parasuis exhibits IgA protease activity but lacks homologs of the IgA protease genes of Haemophilus influenzae - (Peer Reviewed Journal)
Mullins, M.A., Register, K.B., Bayles, D.O., Butler, J.E. 2011. Haemophilus parasuis exhibits IgA protease activity but lacks homologs of the IgA protease genes of Haemophilus influenzae. Veterinary Microbiology. 153(3-4):407-412.
Transcriptome sequencing, and rapid development and application of SNP markers for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae) - (Peer Reviewed Journal)
Margam, V.M., Coates, B.S., Bayles, D.O., Hellmich II, R.L., Agunbiade, T., Seufferheld, M.J., Sun, W., Kroemer, J.A., Ba, M.N., Binso-Dabire, C.L., Baoua, I., Ishiyaku, M.F., Covas, F.G., Srinivasan, R., Armstrong, J., Murdock, L.L., Pittendrigh, B.R. 2011. Transcriptome sequencing, and rapid development and application of SNP markers for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae). PLoS One. 6(7):e21388.
A curated multi-locus sequence typing (MLST) database for Haemophilus parasuis - (Abstract Only) - (28-Feb-11)
Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008 - (Peer Reviewed Journal)
Lorusso, A., Vincent, A.L., Harland, M.L., Alt, D., Bayles, D.O., Swenson, S.L., Gramer, M.R., Russel, C.A., Smith, D.J., Lager, K.M., Lewis, N.S. 2011. Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008. Journal of General Virology. 92(Pt 4):919-930.
G-Csf Analogue Treatment Increases Peripheral Neutrophil Numbers in Pigs - a Potential Alternative for in-Feed Antibiotics - (Abstract Only)
Loving, C.L., Brockmeier, S.L., Bayles, D.O., Greenlee, J.J., Lager, K.M., Kehrli, Jr., M.E. 2010. G-CSF analogue treatment increases peripheral neutrophil numbers in pigs - a potential alternative for in-feed antibiotics. Conference of Research Workers in Animal Diseases. Paper No. 140.
Immunologic responses to Mycobacterium avium subsp. paratuberculois protein cocktail vaccines in a mouse model - (Proceedings)
Barnhill, A.E., Bannantine, J.P., Chang, Y., Osman, M., Bayles, D.O., Stabel, J.R. 2010. Immunologic responses to Mycobacterium avium subsp. paratuberculosis protein cocktail vaccines in a mouse model. In: Proceedings of Conference of Research Workers in Animal Diseases, December 6-8, 2010, Chicago, Illinois. p. 15.
Genetic and Antigenic Characterization of H1 Influenza Viruses from United States Swine Prior to the Emergence of the 2009 Pandemic H1N1 - (Abstract Only)
Lorusso, A., Vincent, A., Harland, M., Alt, D., Bayles, D., Swenson, S., Gramer, M., Russell, C., Smith, D., Lager, K., Lewis, N. 2010. Genetic and antigenic characterization of H1 Influenza Viruses from United States swine prior to the emergence of the 2009 pandemic H1N1 [abstract]. Conference of Research Workers in Animal Diseases. Paper No. 194.
Transcript Expression Analysis in Tracheobronchial Lymph Nodes of Pseudorabies Virus Infected Pigs - (Abstract Only)
Miller, L.C., Harhay, G.P., Bayles, D.O., Zanella, E.L., Lager, K.M. 2010. Transcript expression analysis in tracheobronchial lymph nodes of pseudorabies virus infected pigs [abstract]. Conference of Research Workers in Animal Diseases. Paper No. 115P.
Transcript Expression Analysis in Tracheobronchial Lymph Nodes of Pseudorabies Virus Infected Pigs - (Abstract Only)
Miller, L.C., Harhay, G.P., Bayles, D.O., Zanella, E.L., Lager, K.M. 2010. Transcript expression analysis in tracheobronchial lymph nodes of pseudorabies virus infected pigs [abstract]. 45th Meeting of the United States-Japan Cooperative Program in Natural Resources Panel of Animal and Avian Health. p. 11.
Immunlogic responses to Mycobacterium avium subsp. paratuberculosis protein cocktail vaccines in a mouse model - (Abstract Only)
Barnhill, A.E., Bannantine, J.P., Chang, Y., Osman, M.A., Bayles, D.O., Stabel, J.R. 2010. Immunlogic responses to Mycobacterium avium subsp. paratuberculosis protein cocktail vaccines in a mouse model [abstract]. U.S.-Japan Cooperative Program in Natural Resources Panel of Animal and Avian Health. p. 15.
Transcript Expression Analysis in Tracheobronchial Lymph Nodes of Pseudorabies Virus Infected Pigs - (Abstract Only)
Miller, L.C., Harhay, G.P., Bayles, D.O., Zanella, E.L., Lager, K.M. 2010. Transcript Expression Analysis in Tracheobronchial Lymph Nodes of Pseudorabies Virus Infected Pigs [abstract]. 32nd Conference for the International Society for Animal Genetics. Paper No. P105.
Genome Sequence of Mycobacterium avium subspecies paratuberculosis Sheep Isolate 397 Reveals Striking Differences Among a Genetically Homogeneous Subspecies - (Abstract Only) - (23-May-10)
Metagenomic and 16S rRNA Analyses of Fecal Bacteria of Swine Given Diets Containing Antibiotics - (Abstract Only) - (02-May-10)
Genetic and Antigenic Characterization of 2008 Swine Influenza Viruses from the United States - (Proceedings)
Vincent, A.L., Harland, M.L., Lorusso, A., Alt, D.P., Bayles, D.O., Swenson, S.L., Gramer, M.R., Lager, K.M., Lewis, N. 2010. Genetic and Antigenic Characterization of 2008 Swine Influenza Viruses from the United States. In: Proceedings of the International Pig Veterinary Society Congress, July 18-21, 2010, Vancouver, Canada. p. 259.
Characteristics of an Extensive Mycobacterium avium subspecies paratuberculosis Recombinant Protein Set Reprint Icon - (Peer Reviewed Journal)
Bannantine, J.P., Stabel, J.R., Bayles, D.O., Geisbrecht, B. 2010. Characteristics of an Extensive Mycobacterium avium subspecies paratuberculosis Recombinant Protein Set. Protein Expression and Purification. 72(2):223-233.
A Modified Multi-Locus Sequence Typing (MLST) Scheme for Haemophilus parasuis - (Proceedings)
Register, K.B., Mullins, M., Bayles, D.O. 2010. A Modified Multi-Locus Sequence Typing (MLST) Scheme for Haemophilus parasuis. In: Proceedings of the International Pig Veterinary Society Congress, July 18-21, 2010, Vancouver, Canada. p. 516.
Emerging Pestiviruses - (Abstract Only)
Ridpath, J.F., Bayles, D.O., Neill, J.D., Kirkland, P.D., Finlaison, D.S., Frost, M.J. 2010. Emerging Pestiviruses [abstract]. UJNR Food & Agricultural Panel. p. 114-115.
Studies of pathogenesis, transmission, heterologous protection, and genomics of four isolates of Haemophilus parasuis - (Abstract Only)
Brockmeier, S., Loving, C.L., Register, K.B., Nicholson, T.L., Bayles, D.O., Phillips, G.J. 2009. Studies of pathogenesis, transmission, heterologous protection, and genomics of four isolates of Haemophilus parasuis [abstract]. 2009 Conference of Research Workers in Diseases. Abstract No. 15, p. 118.
Studies of Pathogenesis, Transmission, and Heterologous Protection of Four Isolates of Haemophilus parasuis in a Highly Susceptible Swine Population - (Abstract Only)
Brockmeier, S., Loving, C.L., Register, K.B., Nicholson, T.L., Bayles, D.O., Phillips, G.J. 2010. Studies of pathogenesis, transmission, and heterologous protection of four isolates of Haemophilus parasuis in a highly susceptible swine population [abstract]. 2010 American Association of Swine Veterinarians Annual Meeting. p. 127-129.
Characterization and comparative analysis of the genes encoding Haemophilus parasuis outer membrane proteins P2 and P5 - (Peer Reviewed Journal)
Mullins, M.A., Register, K.B., Bayles, D.O., Loving, C.L., Nicholson, T.L., Brockmeier, S.L., Dyer, D.W., Phillips, G.J. 2009. Characterization and Comparative Analysis of the Genes Encoding Haemophilus parasuis Outer Membrane Proteins P2 and P5. Journal of Bacteriology. 191(19):5988-6002.
Identification and Comparative Analysis of Genes Encoding Outer Membrane Proteins P2 and P5 in Haemophilus parsuis - (Abstract Only)
Mullins, M.A., Register, K.B., Bayles, D.O., Loving, C.L., Nicholson, T.L., Brockmeier, S.L., Dyer, D.W., Phillips, G.J. 2009. Identification and comparative analysis of genes encoding outer membrane proteins P2 and P5 in Haemophilus parsuis [abstract]. 109th American Society for Microbiology General Meeting. Poster No. Z-034.
The CsgA and Lpp proteins affect HEp-2 cell invasion, motility, and biofilm formation in a strain of Escherichia coli O157:H7 - (Peer Reviewed Journal)
Uhlich, G.A., Gunther, N.W., Bayles, D.O., Mosier, D.A. 2009. The CsgA and Lpp proteins affect HEp-2 cell invasion, motility, and biofilm formation in a strain of Escherichia coli O157:H7. Infection and Immunity. 77(4):1543-1552.
Analysis of foodborne bacteria by differential scanning calorimetry - (Book / Chapter)
Tunick, M.H., Novak, J.S., Bayles, D.O., Lee, J., Kaletunc, G. 2009. Analysis of foodborne bacteria by differential scanning calorimetry. Calorimetry in Food Processing.
Proteomic changes in Escherichia coli when grown in fresh milk versus laboratory media Reprint Icon - (Peer Reviewed Journal)
Lippolis, J.D., Bayles, D.O., Reinhardt, T.A. 2009. Proteomic changes in Escherichia coli when grown in fresh milk versus laboratory media. Journal of Proteome Research. 8(1):149-158.
Identification of a Divided Genome for VSH-1, the Prophage-Like Gene Transfer Agent of Brachyspira hyodysenteriae - (Peer Reviewed Journal)
Stanton, T.B., Humphrey, S.B., Bayles, D.O., Zuerner, R.L. 2008. Identification of a Divided Genome for VSH-1, the Prophage-Like Gene Transfer Agent of Brachyspira hyodysenteriae. Journal of Bacteriology. 191(5):1719-1721.
Comparison of Recognized Pestivirus Species with Two New Putative Species Represented by the Strains Pronghorn and Bungowannah - (Abstract Only)
Ridpath, J.F., Bayles, D.O., Neill, J.D., Kirkland, P.D., Finlaison, D.S., Frost, M.J. 2008. Comparison of Recognized Pestivirus Species with Two New Putative Species Represented by the Strains Pronghorn and Bungowannah [abstract]. 7th International Pestivirus Symposium, European Society for Veterinary Virology. p. 119.
Osteopontin: A Novel Cytokine Involved in the Regulation of Mycobacterium avium subsp. paratuberculosis Infection in Periparturient Dairy Cattle - (Peer Reviewed Journal)
Karcher, E.L., Bayles, D.O., Bannantine, J.P., Beitz, D.C., Stabel, J.R. 2008. Osteopontin: A Novel Cytokine Involved in the Regulation of Mycobacterium avium subsp. paratuberculosis Infection in Periparturient Dairy Cattle. Journal of Dairy Science. 91(8):3079-3091.
The CsgA and Lpp proteins affect motility and cell invasion in a strain of Escherichia coli O157:H7 - (Abstract Only)
Uhlich, G.A., Bayles, D.O., Mosier, D.A. The CsgA and Lpp proteins affect motility and cell invasion in a strain of Escherichia coli O157:H7. Meeting Abstract.
Early Antibody Response Against Mycobacterium avium subspecies paratuberculosis Antigens in Subclinical Cattle Reprint Icon - (Peer Reviewed Journal)
Bannantine, J.P., Bayles, D.O., Waters, W.R., Palmer, M.V., Stabel, J.R., Paustian, M. 2008. Early Antibody Response Against Mycobacterium avium subspecies paratuberculosis Antigens in Subclinical Cattle. Proteome Science. 6:5.
Comparison of the Cecal Microbiota of Domestic and Wild Turkeys - (Peer Reviewed Journal)
Scupham, A.J., Patton, T.G., Bent, E., Bayles, D.O. 2008. Comparison of the cecal microbiota of domestic and wild turkeys. Microbial Ecology. 56(2):322-31. Available: http://www.springerlink.com/content/x2kr73p8l4837555/fulltext.html.
The Lpp lipoprotein suppresses motility in a biofilm-forming strain of Escherichia coli O157:H7 - (Abstract Only)
Uhlich, G.A., Bayles, D.O. 2007. The Lpp lipoprotein suppresses motility in a biofilm-forming strain of Escherichia coli O157:H7. International Association of Food Protection. Abstract. P5-15.
Post-Infectious Irritable Bowel Syndrome: a Long Term Consequence of Bacterial Gastroenteritis - (Review Article)
Smith, J.L., Bayles, D.O. 2007. Post-infectious irritable bowel syndrome: a long term consequence of bacterial gastroenteritis. Journal of Food Protection. Vol.70(7):1762-1769.
Identification of Potential Cold-Related Genes in Listeria monocytogenes - (Abstract Only) - (11-Jan-07)
Mutations in Crp/fnr Family of Regulatory Genes in Listeria Monocytogenes Strain F2365 Do Not Alter Heat Resistance at 60 Degrees C - (Peer Reviewed Journal)
Bayles, D.O., Uhlich, G.A. 2006. Mutations in crp/fnr family of regulatory genes in listeria monocytogenes strain f2365 do not alter heat resistance at 60 degrees c. Journal of Food Protection. 69:2758-2760.
A Cold-Sensitive Listeria Monocytogenes Mutant Has a Transposon Insertion in a Gene Encoding a Putative Membrane Protein and Shows Altered (P)ppgpp Levels - (Peer Reviewed Journal)
Liu, S., Bayles, D.O., Mason, T.M., Wilkinson, B.J. 2006. A cold-sensitive Listeria monocytogenes mutant has a transposon insertion in a gene encoding a putative membrane protein and shows altered (p)ppGpp levels. Applied and Environmental Microbiology. 72(6):3955-3959.
Nonlinear Modeling of Real-Time Reverse Transcription Pcr Data from Multiple Independent Samples for Statistically Verified Determination of Relative Mrna Expression Changes - (Abstract Only)
Bayles, D.O. 2006. Nonlinear modeling of real-time reverse transcription pcr data from multiple independent samples for statistically verified determination of relative mrna expression changes. Meeting Abstract. CD-ROM ISBN 1-55581-389-5
The Contribution of Cytolethal Distending Toxin to Bacterial Pathogenesis - (Review Article)
Smith, J.L., Bayles, D.O. 2006. The contribution of cytolethal distending toxin to bacterial pathogenesis. Critical Reviews in Microbiology. 32:227-248.
Thermal Analysis of Ribosomal Proteins in Foodborne Bacteria - (Peer Reviewed Journal)
Tunick, M.H., Bayles, D.O., Novak, J.S. 2006. Thermal analysis of ribosomal proteins in foodborne bacteria. Journal of Thermal Analysis. V. 83; No.1.
Listeria Monocytogenes - (Book / Chapter)
Paoli, G., Bhunia, A., Bayles, D. 2005. Listeria monocytogenes. Foodborne Pathogens: Microbiology and Molecular Biology Reviews. Horizon Scientific Press, Norwich, UK. Chapter 15. p. 295-325.
Improved Technique for Robotic Spotting and Detection of Low Abundance Proteins by Maldi-Tof/tof Mass Spectrometry - (Abstract Only)
Nunez, A., Bayles, D.O., Fortis, L.L. 2005. Improved technique for robotic spotting and detection of low abundance proteins by maldi-tof/tof mass spectrometry. Meeting Abstract.
Improvements in Robotic Sample Preparation for the Identification of Low Abundance Bacterial Proteins Via Maldi Mass Spectrometry - (Abstract Only)
Bayles, D.O. 2005. Improvements in robotic sample preparation for the identification of low abundance bacterial proteins via maldi mass spectrometry. 105 General Meeting of the American Association for Microbiology. CD ROM ISBN 1-55581-338-0. Paper NO. 0-018.
Mutations in Crp/fnr Family of Regulatory Genes in Listeria Monocytogenes Do Not Alter the Heat Resistance of the Pathogen - (Abstract Only)
Bayles, D.O., Uhlich, G.A. 2005. Mutations in crp/fnr family of regulatory genes in listeria monocytogenes do not alter the heat resistance of the pathogen. Meeting Abstract. Poster P1-11. pg. 69.
Analysis of Foodborne Bacteria by Differential Scanning Calorimetry - (Abstract Only)
Tunick, M.H., Bayles, D.O., Novak, J.S. 2005. Analysis of foodborne bacteria by differential scanning calorimetry. (abstract). IFT Annual Mtg. Paper No. 74-2. Available: http://ift.confex.com/ift2005/techprogram/paper 27433 htm.
Molecular Approaches for Detection, Identification, and Analysis of Food-Borne Pathogens - (Book / Chapter)
Fratamico, P.M., Bayles, D.O. 2005. Molecular approaches for detection, identification, and analysis of food-borne pathogens. Book Chapter. Foodborne Pathogens: Microbiology and Molecular Biology. Caister Academic Press, Norfolk, Virginia. pg. 1-13.
Precursor and Temperature Modulation of Fatty Acid Composition and Growth of Listeria Monocytogenes Cold-Sensitive Mutants with Transposon-Interrupted Branched-Chain Alpha-Keto Acid Dehydrogenase - (Peer Reviewed Journal)
Zhu, K., Bayles, D.O., Xiong, A., Jayaswal, R.K., Wilkinson, B.J. 2005. Precursor and temperature modulation of fatty acid composition and growth of listeria monocytogenes cold-sensitive mutants with transposon-interrupted branched-chain alpha-keto acid dehydrogenase. Microbiology. 151:615-623.
Effects of Suspension in Emulsified Wiener, Or Incubation in Wiener Packages, on the Virulence of L. Monocytogenes Scott a in Intragastrically Inoculated A/j Mice - (Peer Reviewed Journal)
Faith, N.G., Tamplin, M.L., Bayles, D.O., Luchansky, J.B., Czuprynski, C.J. 2005. Effects of suspension in emulsified wiener, or incubation in wiener packages, on the virulence of L. monocytogenes Scott A in intragastrically inoculated A/J mice. Journal of Food Protection. v. 68. p. 597-601.
"ohmics" and Control of Food-Borne Pathogens: Emphasis on Listeria Monocytogenes in Ready-to-Eat Meats - (Proceedings)
Uhlich, G.A., Bayles, D.O., Gilbreth, S.E., Call, J.E., Luchansky, J.B. 2004. "ohmics" and control of food-borne pathogens: emphasis on listeria monocytogenes in ready-to-eat meats. United States Japan Natural Resources Protein Panel. Food and Agriculture Panel. p. 397-401
Dsc Analysis of Foodborne Bacteria - (Proceedings)
Tunick, M.H., Bayles, D.O., Novak, J.S. 2004. DSC Analysis of Foodborne Bacteria. NATAS 32nd Annual Conf. Proceedings. October 4-6, 2004. Williamsburg, VA. 2004 CDROM.
Whole Genome Comparisons of Serotype 4b and 1/2a Strains of the Food-Borne Pathogen Listeria Monocytogenes Reveal New Insights into the Core Genome Components of This Species - (Peer Reviewed Journal)
Nelson, K., Fouts, D., Mongodin, E., Fraser, C., Kathariou, S., Wonderling, L.D., Uhlich, G.A., Bayles, D.O., Luchansky, J.B. 2004. Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen listeria monocytogenes reveal new insights into the core genome components of this species. Proceedings Of The National Academy Of Sciences. 2004. Vol. 32. No. pg. 2386-2395.
Survival of Listeria Monocytogenes Strain H7762 and Resistance to Simulated Gastric Fluid Following Exposure to Frankfurter Exudate - (Peer Reviewed Journal)
Wonderling, L.D., Bayles, D.O. 2004. Survival of listeria monocytogenes strain h7762 and resistance to simulated gastric fluid following exposure to frankfurter exudate. Journal of Food Protection. 67:1170-1176
The Htra (Degp) Gene of Listeria Monocytogenes 10403s, a Serotype 1/2a Isolate, Is Essential for Optimal Growth under Stress Conditions - (Peer Reviewed Journal)
WONDERLING, L.D., BAYLES, D.O., WILKINSON, B.J. THE HTRA (DEGP) GENE OF LISTERIA MONOCYTOGENES 10403S, A SEROTYPE 1/2A ISOLATE, IS ESSENTIAL FOR OPTIMAL GROWTH UNDER STRESS CONDITIONS. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2004. Vol. 4T7. pg. 1935-1943
Changes in Thermal Sensitivity Resulting from Ph and Nutritional Shifts of Acid-Adapted and Non-Acid-Adapted Listeria Monocytogenes Scott A, a Serotype 4b Strain - (Peer Reviewed Journal)
Bayles, D.O. 2004. Changes in thermal sensitivity resulting from ph and nutritional shifts of acid-adapted and non-acid-adapted listeria monocytogenes scott a, a serotype 4b strain. Journal of Food Protection. 67:316-321.
Changes in Thermal Sensitivity Resulting from Ph and Nutritional Shifts of Acid Adapted and Non-Acid Adapted Salmonella Enterica Serovar Typhimurium Dt104 - (Peer Reviewed Journal)
Bayles, D.O. Changes in thermal sensitivity resulting from ph and nutritional shifts of acid adapted and non-acid adapted salmonella enterica serovar typhimurium dt104. Journal of Food Protection.
A Method for Evaluating Changes to Uvm for Improving the Growth of Listeria Monocytogenes - (Abstract Only)
Bayles, D.O. 2003. A method for evaluating changes to uvm for improving the growth of listeria monocytogenes. Meeting Abstract. P074.
Environmental, Host, and Bacterial Factors That Influence the Pathogenesis of Gastrointestinal Listeriosis - (Proceedings)
Czuprynski, C.J., Faith, N.G., Tamplin, M.L., Uhlich, G.A., Wonderling, L.D., Bayles, D.O., Luchansky, J.B. 2003. Environmental, host, and bacterial factors that influence the pathogenesis of gastrointestinal listeriosis. Meeting Abstract. Part 8,Section 15, No.3.
Application of the Sas Adx Interface for Optimization of Single and Multiplex Pcr for Real-Time Pcr Detection of Listeria - (Proceedings)
Bayles, D.O. 2003. Application of the sas adx interface for optimization of single and multiplex pcr for real-time pcr detection of listeria. United States Japan Natural Resources Protein Panel 31st Annual Meeting Proceedings. p. H1-9.
DNA Microarrays: Gene Expression Applications - (Other)
Bayles, D.O. 2003. Dna microarrays: gene expression applications. American Society for Microbiology. ASM News. 69(4):204.
Development of a Real-Time Multiplex Pcr Assay for Detection of Listeria Monocytogenes and Comparison of Dual-Labeled Probes, Molecular Beacons, and Sybrâ Green I for Detection in Real Time - (Abstract Only)
Bayles, D.O. 2003. Development of a real-time multiplex pcr assay for detection of listeria monocytogenes and comparison of dual-labeled probes, molecular beacons, and sybrâ green i for detection in real time. 103rd General Meeting of the American Association for Microbiology. Paper No. 057. p. 499.
Last Modified: 10/25/2014
Footer Content Back to Top of Page