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United States Department of Agriculture

Agricultural Research Service

Research Project: Environmentally Sound Manure Management for Reduction of Gas Emissions, Nutrients, and Pathogens

Location: Agroecosystem Management Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Soil carbon accumulation under switchgrass barriers - (Peer Reviewed Journal)
(25-Aug-14)
Characterization of antibiotic resistant (AR) fecal indicators in runoff from fields amended with swine manure - (Abstract Only)
(28-Jul-14)
Impacts of antibiotic use in agriculture: what are the benefits and risks? - (Peer Reviewed Journal)
Durso, L.M., Cook, K.L. 2014. Impacts of antibiotic use in agriculture: what are the benefits and risks? Current Opinion in Microbiology. 19:37-44. DOI: 10.1016/J.MIB.2014.05.019.
Co-occurrence of antibiotic drugs, resistant bacteria and resistance genes in runoff from cattle feedlots - (Abstract Only)
(18-Apr-14)
Nutrient concentrations of runoff as affected by the diameter of unconsolidated material from feedlot surfaces     Reprint Icon - (Peer Reviewed Journal)
Gilley, J.E., Boone, G.D., Marx, D.B. 2014. Nutrient concentrations of runoff as affected by the diameter of unconsolidated material from feedlot surfaces. Transactions of the ASABE. 57(3):749-759. DOI: 10.13031/TRANS.57.10191.
Fate of antimicrobials and antimicrobial resistance genes in simulated swine manure storage     Reprint Icon - (Peer Reviewed Journal)
Joy, S.R., Li, X., Snow, D.D., Gilley, J.E., Woodbury, B.L., Bartlett-Hunt, S.L. 2014. Fate of antimicrobials and antimicrobial resistance genes in simulated swine manure storage. Science of the Total Environment. 481:69-74. Available: http://dx.doi.org/10.1016/j.scitotenv.2014.02.027.
Runoff nutrient transport as affected by land application method, swine growth stage, and runoff rate     Reprint Icon - (Peer Reviewed Journal)
Gilley, J.E., Bartelt-Hunt, S.L., Lamb, S.J., Li, X., Marx, D.B., Snow, D.D., Parker, D.B., Woodbury, B.L. 2014. Runoff nutrient transport as affected by land application method, swine growth stage, and runoff rate. Transactions of the ASABE. 56(6):1295-1303. DOI: 10.13031/TRANS.56.10146.
Persistence of erythromycin resistance gene erm(B) in cattle feedlot pens over time     Reprint Icon - (Peer Reviewed Journal)
Mantz, A.R., Miller, D.N., Spiehs, M.J., Woodbury, B.L., Durso, L.M. 2013. Persistence of erythromycin resistance gene erm(B) in cattle feedlot pens over time. Agriculture, Food and Analytical Bacteriology. 3(4):312-320.
Fate and transport of antimicrobials and antimicrobial resistance genes in soil and runoff following land application of swine slurry     Reprint Icon - (Peer Reviewed Journal)
Joy, S.R., Bartelt-Hunt, S.L., Snow, D.D., Gilley, J.E., Woodbury, B.L., Parker, D.B., Marx, D.B., Li, X. 2013. Fate and transport of antimicrobials and antimicrobial resistance genes in soil and runoff following land application of swine slurry. Journal of Environmental Science and Technology. 47:12081-12088. DOI: ORG/10.1021/ES4026358.
Bacterial diversity of rice fields in the South of Brazil - (Abstract Only)
(11-Sep-13)
Narrow grass hedge effects on nutrient transport following swine slurry application     Reprint Icon - (Peer Reviewed Journal)
Gilley, J.E., Bartelt-Hunt, S.L., Lamb, S.L., Li, X., Marx, D.B., Snow, D.D., Parker, D.B., Woodbury, B.L. 2013. Narrow grass hedge effects on nutrient transport following swine slurry application. Transactions of the ASABE. 56(4):1441-1450.
Abundance of ammonia oxidizing bacteria and archaea under long-term maize cropping systems. - (Abstract Only)
(26-Jun-13)
Nitrogen loss from sprinkler applied beef feedlot effluent - (Abstract Only)
(26-Jun-13)
Primary isolation of Shiga toxigenic Escherichia coli from environmental sources     Reprint Icon - (Peer Reviewed Journal)
Durso, L.M. 2014. Primary isolation of Shiga toxigenic Escherichia coli from environmental sources. Journal of Environmental Quality. 42(5):1295-1307. DOI: 10.2134/JEQ2013.02.0035.
Temporal characterization of bacteria in hayrings serving as stable fly larval development sites - (Abstract Only)
(07-Jun-13)
Antibiotic resistance in agricultural environments: a call to action - (Abstract Only)
Mcclain, J.E., Durso, L.M., Snow, D.L. 2013. Antibiotic resistance in agricultural environments: a call to action. ASA-CSSA-SSSA Annual Meeting Abstracts. CD-ROM. 213-10.
Spatial mapping of antibiotic resistance - (Abstract Only)
Mantz, A.R., Miller, D.N., Spiehs, M.J., Woodbury, B.L., Durso, L.M. 2013. Spatial Mapping of Antibiotic Resistance [abstract]. ASA-CSSA-SSSA Annual Meeting, November 3-6, 2013, Tampa, Florida. CD-ROM. 1104.
Hydraulic conditions required to not move unconsolidated surface materials located within feedlots     Reprint Icon - (Peer Reviewed Journal)
Gilley, J.E., Boone, G.D., Marx, D.B. 2013. Hydraulic conditions required to not move unconsolidated surface materials located within feedlots. Transactions of the ASABE. 56(3): 911-918.
Pathogen survival in fields irrigated with livestock-contaminated irrigation water - (Abstract Only)
(19-Apr-13)
Diversity of microbiomes in beef cattle - (Book / Chapter)
Durso, L.M., Wells, J., Kim, M.S. 2013. Diversity of microbiomes in beef cattle. In: Nelson, K., editor. Encyclopedia of Metagenomics. Springer Reference (www.springerreference.com). Berlin/Heidelberg, Germany: Springer-Verlag. Available: http://www.springerreference.com/docs/html/chapterdbid/333718.html.
Studying manure in cows, in feedlots, in fields - (Abstract Only)
(22-Mar-13)
Effect of feeding distiller’s grains on reduced sulfur emissions - (Proceedings)
Miller, D.N., Spiehs, M.J., Woodbury, B.L. 2013. Effect of feeding distiller’s grains on reduced sulfur emissions. In: Waste to Worth: Spreading Science and Solutions, April 1-5, 2013, Denver, Colorado. Available: http://www.extension.org/pages/67657/effect-of-feeding-distillers-grains-on-reduced-sulfur-emissions.
Mining metagenomic datasets for antibiotic resistance genes - (Book / Chapter)
Durso, L.M. 2013. Mining metagenomic datasets for antibiotic resistance genes. In: Nelson, K. editor. Encyclopedia of Metagenomics: SpringerReference (www.springerreference.com). Berlin/Heidelberg, Germany: Springer-Verlag. DOI:10.1007/SpringerReference_332403 2013-01-23 22:12:18 UTC.
Distribution and quantification of antibiotic resistance genes and bacteria across agricultural and non-agricultural metagenomes     Reprint Icon - (Peer Reviewed Journal)
Durso, L.M., Miller, D.N., Wienhold, B.J. 2012. Distribution and quantification of antibiotic resistance genes and bacteria across agricultural and non-agricultural metagenomes. PLoS One [online]. Available: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0048325.
Assessment of antibiotic resistance in runoff from cattle feedlots - (Abstract Only)
(12-Sep-12)
Antibiotic resistance in agricultural and non-agricultural settings - (Abstract Only)
(28-Jun-12)
Megraft: A software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes - (Peer Reviewed Journal)
Bengtsson, J., Hartmann, M., Unterseher, M., Vaishampayan, P.A., Abarenkov, K., Durso, L.M., Bik, E.M., Garey, J.R., Eriksson, K., Nilsson, R. 2012. Megraft: A software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes. Research in Microbiology. 163:407-412. DOI: 10.1016J.RESMIC.2012.07.001.
Evaluation of a vegetative treatment system to reduce fecal microorganisms and antibiotic resistant bacteria in beef cattle feedlot runoff - (Abstract Only)
Miller, D.N., Durso, L.M., Henry, C.G. 2012. Evaluation of a vegetative treatment system to reduce fecal microorganisms and antibiotic resistant bacteria in beef cattle feedlot runoff. Microbial Ecology International Symposium. Section PS22 Microbial Disease Ecology. Poster 391A.
Comparison of bacterial communities in faeces of beef cattle fed diets containing corn and wet distillers grain with solubles     Reprint Icon - (Peer Reviewed Journal)
Durso, L.M., Wells, J., Harhay, G.P., Rice, W.C., Kuehn, L.A., Bono, J.L., Shackelford, S.D., Wheeler, T.L., Smith, T.P. 2012. Comparison of bacterial communities in faeces of beef cattle fed diets containing corn and wet distillers grain with solubles. Letters in Applied Microbiology. 55(2):109-14. DOI: 10.1111/J.1472-765X.2012.03265.X.
Wheat strip effects on nutrient loads following variable manure application     Reprint Icon - (Peer Reviewed Journal)
Thayer, C.A., Gilley, J.E., Durso, L.M., Marx, D.B. 2012. Wheat strip effects on nutrient loads following variable manure application. Transactions of the ASABE. 55(2):439-449.
Epidemiologic and occupational investigation of an Escherichia coli O111 outbreak associated with a correctional facility dairy – Colorado, 2010 - (Peer Reviewed Journal)
Comstock, N., Towle, M., Warner, A., Reynolds, S., Durso, L.M., Campbell, C., Kiefer, M., Bosch, S.A. 2012. Epidemiologic and occupational investigation of an Escherichia coli O111 outbreak associated with a correctional facility dairy – Colorado, 2010. Morbidity and Mortality Weekly Reports. 61(9).
Runoff nutrient loads as affected by residue cover, manure application rate, and flow rate     Reprint Icon - (Peer Reviewed Journal)
Thayer, C., Gilley, J.E., Durso, L.M., Marx, D. 2012. Runoff nutrient loads as affected by residue cover, manure application rate, and flow rate. Transactions of the ASABE. 55(1): 249-258.
Effects of animal diet, manure application rate, and tillage on transport of microorganisms from manure-amended fields     Reprint Icon - (Peer Reviewed Journal)
Durso, L.M., Gilley, J.E., Marx, D.B., Woodbury, B.L. 2011. Effects of animal diet, manure application rate, and tillage on transport of microorganisms from manure-amended fields. Applied and Environmental Microbiology. 77:6715-6717.
Linking microbial community structure and function to characterize antibiotic resistant bacteria and antibiotic resistant genes from cattle feces - (Abstract Only)
Durso, L.M. 2011. Linking microbial community structure and function to characterize antibiotic resistant bacteria and antibiotic resistant genes from cattle feces [abstract]. ASA-CSSA-SSSA Annual Meeting Abstracts. Poster No. 355-4(135). Available: http://a-c-s.confex.com/crops/2011am/webprogram/Session8331.html.
Nitrifier activity and diversity in swine lagoon covers - (Abstract Only)
Miller, D.N. 2011. Nitrifier activity and diversity in swine lagoon covers [abstract]. ASA-CSSA-SSSA Annual Meeting Abstracts. Paper No. 355-6. Available: http://a-c-s.convex.com/crops/2011am/webprogram/Paper64750.html.
Assessing the performance of a vegetative treatment system to reduce pathogens in feedlot runoff - (Abstract Only)
(31-Mar-11)
Microbiological quality of runoff from manure-amended fields as affected by perennial grass buffer strip - (Abstract Only)
Durso, L.M., Gilley, J.E., Woodbury, B.L., Marx, D.B. 2011. Microbiological quality of runoff from manure-amended fields as affected by perennial grass buffer strip. American Society for Microbiology 111th General Meeting, New Orleans, Louisiana. 2011 CDROM: ASM Abstracts. Poster Board No. 2803.
Seasonal differences in odor compound content and emission from pit, slurry tank, and lagoon storage structures - (Proceedings)
(14-Jan-11)
Last Modified: 10/22/2014
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