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United States Department of Agriculture

Agricultural Research Service

Related Topics

Research Project: Cereal Rust Fungi: Genetics, Population Biology, and Host-Pathogen Interactions

Location: Cereal Disease Laboratory

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Characterization of stem rust resistance in wheat cultivar 'Gage' - (Peer Reviewed Journal)
(01-Sep-14)
Genome-wide genetic dissection of supernumerary spikelet and related traits in common wheat (Triticum aestivum L.) - (Peer Reviewed Journal)
Echeverry-Solarte, M., Kumar, A., Kianian, S., Mantovani, E.E., Simsek, S., Mergoum, M., Alamari, M.S. 2014. Genome-wide genetic dissection of supernumerary spikelet and related traits in common wheat (Triticum aestivum L.). The Plant Genome. Available: https://dl.sciencesocieties.org/files/publications/tpg/first-look/tpg-2014-03-0013.pdf.
Mapping of two loci conferring resistance to wheat stem rust pathogen races TTKSK (Ug99) and TRTTF in the elite hard red spring wheat line SD4279 - (Peer Reviewed Journal)
(13-Aug-14)
Reliable Radiation Hybrid Maps: An Efficient Scalable Clustering-based Approach - (Peer Reviewed Journal)
Seetan, R., Denton, A., Al-Azzam, O., Iqbal, J., Kianian, S. 2014. Reliable Radiation Hybrid Maps: An Efficient Scalable Clustering-based Approach. IEEE/ACM Transactions on Computational Biology and Bioinformatics. Available: http://www.computer.org/csdl/trans/tb/preprint/06827170.pdf.
Analysis of ATP6 sequence diversity in the Triticum-Aegilops group of species reveals the crucial role of rearrangement in mitochondrial genome evolution - (Peer Reviewed Journal)
Soltani, A., Ghavami, F., Mergoum, M., Hegstad, J., Noyszewski, A., Meinhardt, S., Kianian, S. 2014. Analysis of ATP6 sequence diversity in the Triticum-Aegilops group of species reveals the crucial role of rearrangement in mitochondrial genome evolution. Genome. 57(5):279-288.
Registration of Colter wheat - (Peer Reviewed Journal)
(26-Jun-14)
Russian populations of Puccinia triticina in distant regions are not differentiated for virulence and molecular genotype - (Peer Reviewed Journal)
Kolmer, J.A., Kabdulova, M., Mustafina, M.A., Zhemchuzhina, N.S., Dubovoy, V. 2014. Russian populations of Puccinia triticina in distant regions are not differentiated for virulence and molecular genotype. Plant Pathology. Available: http://onlinelibrary.wiley.com/doi/10.1111/ppa.12248/abstract.
Characterization of Sr9h, a Ug99-resistant allele of wheat stem rust resistance gene Sr9, and coupling to Sr28 on chromosome arm 2BL - (Peer Reviewed Journal)
Rouse, M.N., Nirmala, J.H., Jin, Y., Chao, S., Fetch, T.G., Pretorius, Z., Hiebert, C. 2014. Characterization of Sr9h, a Ug99-resistant allele of wheat stem rust resistance gene Sr9, and coupling to Sr28 on chromosome arm 2BL. Journal of Theoretical and Applied Genetics. 127:1681-1688.
A consensus map for Ug99 stem rust resistance loci in wheat - (Peer Reviewed Journal)
Yu, L., Hugues, B., Rouse, M.N., Singh, S., Singh, R.P., Bhavani, S., Huerta-Espino, J., Sorrells, M.E. 2014. A Consensus Map for Ug99 Stem Rust Resistance Loci in Wheat. Theoretical and Applied Genetics. Available: http://link.springer.com/article/10.1007%2Fs00122-014-2326-7.
Mitochondrial dynamics and the cell cycle - (Peer Reviewed Journal)
Kianian, P., Kianian, S. 2014. Mitochondrial dynamics and the cell cycle. Frontiers in Plant Science. Availeable: http://journal.frontiersin.org/Journal/10.3389/fpls.2014.00222/full.
The transcriptome landscape of early maize meiosis - (Peer Reviewed Journal)
Dukowic-Schulze, S., Sundararajan, A., Mudge, J., Ramaraj, T., Farmer, A.D., Wang, M., Sun, Q., Pillardy, J., Kianian, S., Retzel, E.F., Pawlowski, W.P., Chen, C. 2014. The transcriptome landscape of early maize meiosis. Biomed Central (BMC) Plant Biology. 14:118.
Wheat leaf rust caused by Puccinia triticina in the United States in 2013 - (Peer Reviewed Journal)
(26-Apr-14)
High density mapping of a resistance gene to Ug99 from an Iranian landrace - (Peer Reviewed Journal)
Zurn, J.D., Newcomb, M.S., Rouse, M.N., Jin, Y., Shiaoman, C., Sthapit, J., See, D.R., Wanyera, R., Njau, P., Bonman, J.M., Brueggeman, R., Acevedo, M. 2014. High density mapping of a resistance gene to Ug99 from an Iranian landrace. Molecular Breeding. 34:871-881.
Registration of Warhorse wheat - (Peer Reviewed Journal)
(26-Feb-14)
Physiologic specialization of Puccinia triticina on wheat in the United States in 2012 - (Peer Reviewed Journal)
Kolmer, J.A., Hughes, M.E. 2014. Physiologic specialization of Puccinia triticina on wheat in the United States in 2012. Plant Disease. 98:1145-1150.
Complementary epistasis involving Sr12 explains adult plant resistance to stem rust in Thatcher wheat (Triticum aestivum L.) - (Peer Reviewed Journal)
Rouse, M.N., Talbert, L.E., Singh, D., Sherman, J.D. 2014. Complementary epistasis involving Sr12 explains adult plant resistance to stem rust in Thatcher wheat (Triticum aestivum L.). Theoretical and Applied Genetics. Available: http://link.springer.com/article/10.1007/s00122-014-2319-6.
Iterative framework radiation hybrid mapping - (Proceedings)
Seetan, R.I., Denton, A.M., Al-Azzam, O., Kumar, A., Sturdivan, J., Kianian, S. 2014. Iterative framework radiation hybrid mapping. Society for Industrial and Applied Mathematics. Available: http://www.siam.org/meetings.sdm14.
Deletion mutagenesis identifies a haploinsufficient role for gamma-zein in opaque-2 endosperm modification - (Peer Reviewed Journal)
Yuan, L., Dou, Y., Kianian, S., Zhang, C., Holding, D.R. 2014. Deletion mutagenesis identifies a haploinsufficient role for gamma-zein in opaque-2 endosperm modification. Plant Physiology. 164:119-130.
Diversity in Puccinia triticina detected on wheat from 2008 to 2010 and the impact of new races on South African wheat germplasm - (Peer Reviewed Journal)
Terefe, T.G., Visser, B., Prins, R., Negussie, T., Kolmer, J.A., Pretorius, Z.A. 2014. Diversity in Puccinia triticina detected on wheat from 2008 to 2010 and the impact of new races on South African wheat germplasm. European Journal of Plant Pathology. 139:95-105.
Ebr1 Genomic Expansion and Its Role in Virulence of Fusarium Species - (Peer Reviewed Journal)
Jonkers, W., Xayamongkhon, H., Haas, M., Olivain, C., Van der Does, H., Broz, K.L., Rep, M., Alabouvette, C., Steinberg, C., Kistler, H.C. 2014. EBR1 genomic expansion and its role in virulence of Fusarium species. Environmental Microbiology. Available: http://www.ncbi.nlm.nih.gov/pubmed/24237614.
Population diversity of Puccinia graminis is sustained through sexual cycle on alternate hosts - (Peer Reviewed Journal)
Jin, Y., Rouse, M.N., Groth, J. 2014. Population diversity of Puccinia graminis is sustained through sexual cycle on alternate hosts. Journal of Integrative Agriculture. 13(2):262-264.
Resistance to Ug99 stem rust in six bread wheat cultivars maps to chromosome 6DS - (Peer Reviewed Journal)
Lopez-Vera, E.E., Nelson, S., Singh, R.P., Basnet, B.R., Haley, S.D., Bhavani, S., Huerta-Espino, J., Xoconostle-Cazares, B., Ruiz-Medrano, R., Rouse, M.N., Singh, S. 2013. Resistance to Ug99 stem rust in six bread wheat cultivars maps to chromosome 6DS. Theoretical and Applied Genetics. 127:231-239.
Population divergence in the wheat leaf rust fungus Puccinia triticina is correlated with wheat evolution - (Peer Reviewed Journal)
Liu, M., Kolmer, J.A. 2013. Population divergence in the wheat leaf rust fungus Puccinia triticina is correlated with wheat evolution. Molecular Phylogenetics and Evolution. 112:443-453.
Understanding the genetic landscape of Puccinia graminis f. sp. tritici, from a global to country perspective - (Abstract Only)
Szabo, L.J., Visser, B., Sakthikumar, S., Johnson, J.L., Park, R., Cuomo, C. 2013. Understanding the genetic landscape of Puccinia graminis f. sp. tritici, from a global to country perspective. Indian Council of Agricultural Research (ICAR) Monograph. p. 3.
Development of wheat-Aegilops speltoides recombinants and simple PCR-based markers for stem rust resistance genes on the 2S#1 chromosome - (Peer Reviewed Journal)
Mago, R., Verlin, D., Zhang, P., Bansal, U., Bariana, H., Jin, Y., Ellis, J., Hoxha, S., Dundas, I. 2013. Development of wheat-Aegilops speltoides recombinants and simple PCR-based markers for stem rust resistance genes on the 2S#1 chromosome. Theoretical and Applied Genetics. 126:2943–2955.
Genome-wide search of stem rust resistance loci at the seedling stage in durum wheat - (Peer Reviewed Journal)
Letta, T., Olivera, P., Maccaferri, M., Jin, Y., Ammar, K., Badebo, A., Noli, E., Crossa, J., Tuberosa, R. 2014. Genome-wide search of stem rust resistance loci at the seedling stage in durum wheat. The Plant Genome. 7:1-13.
Leaf rust resistance in selected Uruguayan late maturity common wheat cultivars - (Peer Reviewed Journal)
German, S.E., Kolmer, J.A. 2013. Leaf rust resistance in selected Uruguayan late maturity common wheat cultivars. Euphytica. 52:606-608.
Molecular phylogenetic relationships of the brown leaf rust fungi on wheat, rye and other grasses - (Peer Reviewed Journal)
Liu, M., Szabo, L.J., Hambleton, S., Anikster, Y., Kolmer, J.A. 2013. Molecular phylogenetic relationships of the brown leaf rust fungi on wheat, rye and other grasses. Plant Disease. 97:1408-1417.
Identification of wheat gene Sr35 that confers resistance to Ug99 stem rust race group - (Peer Reviewed Journal)
Saintenac, C., Zhang, W., Salcedo, A., Rouse, M.N., Trick, H., Akhunov, E., Dubcovsky, J. 2013. Identification of wheat gene Sr35 that confers resistance to Ug99 stem rust race group. Science [online]:1239022. http://www.sciencemag.org/content/early/2013/06/26/science.1239022.
Physiologic specialization of Puccinia triticina on wheat in the United States in 2011 - (Peer Reviewed Journal)
Kolmer, J.A., Hughes, M.E. 2013. Physiologic specialization of Puccinia triticina on wheat in the United States in 2011. Plant Disease. 97:1103-1108.
First Detection of Puccinia hordei virulence to barley leaf rust resistance gene Rph3 and combination with virulence to Rph7 in North America - (Peer Reviewed Journal)
Rouse, M.N., Griffey, C.A., Brooks, W. 2013. First Detection of Puccinia hordei virulence to barley leaf rust resistance gene Rph3 and combination with virulence to Rph7 in North America. Disease Note [online]. 97(6):838. Available: http://www.sciencemag.org/content/early/2013/06/26/science.1239022.
Host status of barley to Puccinia coronata from couch grass and P. striiformis from wheat and brome - (Peer Reviewed Journal)
Niks, R.E., Van Heyzen, S., Szabo, L.J., Alemu, S.K. 2013. Host status of barley to Puccinia coronata from couch grass and P. striiformis from wheat and brome. European Journal of Plant Pathology. 136(2):393-405.
Leaf rust of wheat: Pathogen biology, variation and host resistance - (Peer Reviewed Journal)
Kolmer, J.A. 2013. Leaf rust of wheat: Pathogen biology, variation and host resistance. Forests. 4:70-80.
Development and characterization of a compensating wheat-Thinopyrum intermedium Robertsonian translocation with Sr44 resistance to stem rust (Ug99) - (Peer Reviewed Journal)
Li, W., Danilova, T., Rouse, M.N., Bowden, R.L., Friebe, B., Gill, B.S., Pumphrey, M.0. 2013. Development and characterization of a compensating wheat-Thinopyrum intermedium Robertsonian translocation with Sr44 resistance to stem rust (Ug99). Theoretical and Applied Genetics. 126:1167-1177.
Development of COS-SNP and HRM markers for cost efficient and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.) - (Peer Reviewed Journal)
Terracciano, I., Maccaferri, M., Bassi, F., Mantovani, P., Sanguinet, M., Salvi, S., Simkova, H., Dolezel, J., Massi, A., Ammar, K., Kolmer, J.A., Tuberosa, R. 2013. Development of COS-SNP and HRM markers for cost efficient and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.). Journal of Theoretical and Applied Genetics. 126:1077-1101.
Wheatgrass-wheat partial amphiploids as a novel source of stem rust and Fusarium head blight resistance - (Peer Reviewed Journal)
Turner, K.M., DeHaan, L.R., Jin, Y., Anderson, J.A. 2013. Wheatgrass-wheat partial amphiploids as a novel source of stem rust and Fusarium head blight resistance. Crop Science. 53:1994-2005.
Characterization of the rust fungus, Puccinia emaculata, and evaluation of genetic variability for rust resistance in switchgrass populations - (Peer Reviewed Journal)
Uppalapati, S.R., Serba, D.D., Ishiga, Y., Szabo, L.J., Mittal, S., Bhandari, H.S., Bouton, J.H., Mysore, K.S. 2013. Characterization of the rust fungus, Puccinia emaculata, and evaluation of genetic variability for rust resistance in switchgrass populations . BioEnergy Research. 6(2):458-468.
Identification of resistance to races of Puccinia graminis f. sp. tritici with broad virulence in triticale (X Triticosecale) - (Peer Reviewed Journal)
Olivera, P., Pretorius, Z., Babebo, A., Jin, Y. 2013. Identification of resistance to races of Puccinia graminis f. sp. tritici with broad virulence in triticale (X Triticosecale). Plant Disease. 97:479-484.
Virulence of Puccinia triticina in Turkey and leaf rust resistance in Turkish wheat cultivars - (Peer Reviewed Journal)
Kolmer, J.A., Mertz, Z., Akan, K., Demir, L., Unsal, R., Sermet, C., Keser, M., Akin, B., Morgounov, A. 2012. Virulence of Puccinia triticina in Turkey and leaf rust resistance in Turkish wheat cultivars. European Journal of Plant Pathology. 135:703-716.
First Report of Garlic Rust Caused by Puccinia allii on Allium sativum in Minnesota - (Peer Reviewed Journal)
Szabo, L.J., Mollov, D.S., Rosen, C. 2013. First Report of Garlic Rust Caused by Puccinia allii on Allium sativum in Minnesota. Disease Note. 97(2):285.2.
First Report of Veronica Rust by Puccinia veronicae-longifoliae in Minnesota on Veronica spicata Royal Candles - (Peer Reviewed Journal)
Stoxen, S.M., Mollov, D., Szabo, L.J. 2013. First Report of Veronica Rust by Puccinia veronicae-longifoliae in Minnesota on Veronica spicata Royal Candles. Disease Note. 97:285.
Physiologic specialization of Puccinia graminis f. sp. tritici in Kenya in 2011 - (Abstract Only)
(30-Aug-12)
Evaluation of a SNP-based qPCR identification system for the Ug99 race group using field collections of Puccinia graminis f. sp. tritici in South Africa - (Abstract Only)
Visser, B., Szabo, L.J., Terefe, T., Pretorius, Z. 2012. Evaluation of a SNP-based qPCR identification system for the Ug99 race group using field collections of Puccinia graminis f. sp. tritici in South Africa. Meeting Abstract. p. 239.
Analysis of genetic diversity within the Puccinia graminis Ug99 race group using SNP based markers - (Abstract Only)
Szabo, L.J. 2012. Analysis of genetic diversity within the Puccinia graminis Ug99 race group using SNP based markers. Meeting Abstract. p. 237.
Development of a molecular assay system for the rapid detection and identification of Ug99 and related races of Puccinia graminis - (Abstract Only)
Szabo, L.J., Crouch, J. 2012. Development of a molecular assay system for the rapid detection and identification of Ug99 and related races of Puccinia graminis. Meeting Abstract. p. 238.
Puccinia hordei isolates with virulence to both Rph3 and Rph7 detected in the United States - (Abstract Only)
Rouse, M.N. 2012. Puccinia hordei isolates with virulence to both Rph3 and Rph7 detected in the United States. Abstracts of International Powdery Mildew Conference. p. 57.
Epistatic adult plant resistance in wheat to stem rust cosegregates with Sr12 seedling resistance - (Abstract Only)
Rouse, M.N., Sherman, J., Talbert, L. 2012. Epistatic adult plant resistance in wheat to stem rust cosegregates with Sr12 seedling resistance. Abstracts of International Powdery Mildew Conference. p. 156.
Molecular Characterization of wheat stem rust races in Kenya - (Abstract Only)
Wanyera, R., Kyalo, M., Wanjala, B., Harvey, J., Szabo, L.J. 2012. Molecular Characterization of wheat stem rust races in Kenya. Meeting Abstract. p. 233.
Genetics and mapping of stem rust resistance in MV Zelma winter wheat - (Abstract Only)
Nava, I.C., Rouse, M.N., Chao, S., Jin, Y., Anderson, J.A. 2012. Genetics and mapping of stem rust resistance in MV Zelma winter wheat. Meeting Abstract. In: 2012 BGRI Proceedings ToC.
Inheritance of resistance to Ug99 stem rust in wheat cultivar Norin 40 and genetic mapping of Sr42 - (Peer Reviewed Journal)
Ghazvini, H., Hiebert, C.W., Zegeye, T., Liu, S., Dilawari, M., Anderson, J.A., Rouse, M.N., Jin, Y., Fetch, T. 2012. Inheritance of resistance to Ug99 stem rust in wheat cultivar Norin 40 and genetic mapping of Sr42. Journal of Theoretical and Applied Genetics. 125:817–824.
Last Modified: 10/21/2014
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