Page Banner

United States Department of Agriculture

Agricultural Research Service

Research Project: Improved Strategies for Management of Soilborne Diseases of Horticultural Crops

Location: Horticultural Crops Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Analysis of genome sequences from plant pathogenic Rhodococcus reveals genetic novelties in virulence loci - (Peer Reviewed Journal)
Creason, A.L., Vandeputte, O.M., Savory, E.A., Davis, E.W., Putnam, M.L., Hu, E., Swader-Hines, D., Mol, A., Baucher, M., Prinsen, E., Zdanowska, M., Givan, S.A., El Jaziri, M., Loper, J.E., Mahmud, T., Chang, J.H. 2014. Analysis of genome sequences from plant pathogenic Rhodococcus reveals genetic novelties in virulence loci. PLoS One. 9(7):e101996.
Phytophthora rubi isolates collected from raspberry (Rubus idaeus) in the Western United States show no differentiation in pathogenicity, fungicide resistance or genetic structure - (Peer Reviewed Journal)
(04-Jun-14)
Variation in response among Pythium species and isolates to Streptomyces lydicus - (Abstract Only)
(09-May-14)
Impact of Pratylenchus penetrans on established red raspberry productivity - (Peer Reviewed Journal)
(25-Apr-14)
Pseudomonas protegens Pf-5 causes discoloration and pitting of mushroom caps due to the production of antifungal metabolites - (Peer Reviewed Journal)
Henkels, M.D., Kidarsa, T.A., Shaffer, B.T., Goebel, N.C., Burlinson, P., Mavrodi, D.V., Bentley, M.A., Rangel, L.I., Davis Ii, E.W., Thomashow, L.S., Zabriskie, T., Preston, G.M., Loper, J.E. 2014. Pseudomonas protegens Pf-5 causes discoloration and pitting of mushroom caps due to the production of antifungal metabolites. Molecular Plant-Microbe Interactions. 27(7):733-746.
Using mitogenomic and nuclear ribosomal sequence data to investigate the phylogeny of the Xiphinema americanum species complex - (Peer Reviewed Journal)
Zasada, I.A., Peetz, A.B., Howe, D.K., Wilhelm, L.J., Cheam, D., Denver, D.R., Smythe, A.B. 2014. Using mitogenomic and nuclear ribosomal sequence data to investigate the phylogeny of the Xiphinema americanum species complex. PLoS One. 9:e90035.
Sensitivity of Pythium irregulare, P. sylvaticum, and P. ultimum from forest nurseries to mefenoxam and fosetyl-al, and control of Pythium damping-off - (Peer Reviewed Journal)
Weiland, G.E., Santamaria, L., Grunwald, N.J. 2014. Sensitivity of Pythium irregulare, P. sylvaticum, and P. ultimum from forest nurseries to mefenoxam and fosetyl-al, and control of Pythium damping-off. Plant Disease. 98:937-942.
Understanding the pathology of Douglas-fir seedlings in Pacific Northwest nurseries - (Proceedings)
(15-Jan-14)
Methyl bromide phase out could affect future reforestation efforts - (Trade Journal)
Weiland, G.E. 2014. Methyl bromide phase out could affect future reforestation efforts. Western Forester. 59:8-10.
Pythium species and isolate diversity influence inhibition by the biological control agent Streptomyces lydicus - (Peer Reviewed Journal)
Weiland, G.E. 2014. Pythium species and isolate diversity influence inhibition by the biological control agent Streptomyces lydicus. Plant Disease. 98(5):653-659.
Verticillium wilt in the Pacific Northwest - (Review Article)
Dung, J., Weiland, G.E., Pscheidt, J.W. 2014. Verticillium wilt in the Pacific Northwest. Pacific Northwest Plant Disease Control Handbook. p. 3-22 to 3-28.
pA506: A conjugative plasmid of the plant epiphyte Pseudomonas fluorescens A506 - (Peer Reviewed Journal)
Stockwell, V.O., Davis, E.W., Carey, A.B., Shaffer, B.T., Mavrodi, D.V., Hassan, K.A., Hockett, K.L., Thomashow, L.S., Paulsen, I.T., Loper, J.E. 2013. pA506: A conjugative plasmid of the plant epiphyte Pseudomonas fluorescens A506. Applied and Environmental Microbiology. 79:5272-5282.
The Gac Regulon of Pseudomonas fluorescens SBW25 - (Peer Reviewed Journal)
Cheng, X., De Bruijn, I., Van Der Voort, M., Loper, J.E., Raaijmakers, J.M. 2013. The Gac Regulon of Pseudomonas fluorescens SBW25. Environment Microbiology Reports. 5:608-619.
Effect of tannic acid on the transcriptome of the soil bacterium Pseudomonas protegens Pf-5 - (Peer Reviewed Journal)
Lim Kent, L., Penesyan, A., Hassan, K.H., Loper, J.E., Paulsen, I. 2013. Effect of tannic acid on the transcriptome of the soil bacterium Pseudomonas protegens Pf-5. Applied and Environmental Microbiology. 79:3141-3145.
Pathogenicity and virulence of Pythium species obtained from forest nursery soils on Douglas-fir seedlings - (Peer Reviewed Journal)
Weiland, G.E., Beck, B.R., Davis, E.A. 2013. Pathogenicity and virulence of Pythium species obtained from forest nursery soils on Douglas-fir seedlings. Plant Disease. 97: 744-748.
Genes expressed by the biological control bacterium Pseudomonas protegens Pf-5 on seed surfaces under the control of the global regulators GacA and RpoS - (Peer Reviewed Journal)
Kidarsa, T.A., Shaffer, B.T., Goebel, N.C., Roberts, D.P., Buyer, J.S., Johnson, A., Kobayashi, D.Y., Paulsen, I., Loper, J.E. 2013. Genes expressed by the biological control bacterium Pseudomonas protegens Pf-5 on seed surfaces under the control of the global regulators GacA and RpoS. Environmental Microbiology. 15:716-735.
Integration of brassicaceous seed meals into red raspberry production systems - (Peer Reviewed Journal)
Gigot, J., Zasada, I.A., Walters, T.W. 2012. Integration of brassicaceous seed meals into red raspberry production systems. Applied Soil Ecology. 64:23-31.
The effect of zinc limitation on the transcriptome of Pseudomonas protegens Pf-5 - (Peer Reviewed Journal)
Lim, C., Hassan, K.A., Penesyan, A., Loper, J.E., Paulsen, I. 2013. The effect of zinc limitation on the transcriptome of Pseudomonas protegens Pf-5. Environmental Microbiology. 15:702-715.
Last Modified: 10/1/2014
Footer Content Back to Top of Page