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United States Department of Agriculture

Agricultural Research Service

Research Project: GENETICS, POPULATION BIOLOGY, AND HOST-PARASITE INTERACTIONS OF CEREAL RUST FUNGI AND THEIR DISEASES Title: Virulence in Oat Crown Rust (Puccinia coronata f.sp. avenae) in the United States from 2006-2009

Author
item Carson, Martin

Submitted to: Plant Disease
Publication Type: Peer Reviewed Journal
Publication Acceptance Date: August 4, 2010
Publication Date: N/A

Interpretive Summary: Crown rust is the most important disease of oat in the US. The use of resistant varieties is the primary means of reducing losses to this disease. Unfortunately, the crown rust fungus, Puccinia coronata, quickly adapts to newly released resistant varieties rendering them susceptible within a few years. In order to develop varieties with effective resistance to crown rust breeders need to know what resistance genes are effective against the current crown rust population in the US. Annual surveys in both the winter and spring oat growing regions of the US from 2006 through 2009 show that the crown rust pathogen is very diverse for virulence (its ability to overcome resistance genes in oat). Furthermore, the average virulence of crown rust isolates is increasing. Virulence to a few resistance genes in oat is still low in the US crown rust population and they are still effective. Past experience has shown that this resistance will not last, and there is a need for new crown rust resistance genes in cultivated oat. This information is improtant to oat breeders, pathologists, and the oat milling industry.

Technical Abstract: The use of race-specific seedling genes for resistance is the primary means of controlling crown rust of oat (Puccinia coronata f. sp. avenae) in the United States. To better utilize those resistance genes, knowledge of the occurrence and frequency of corresponding virulence in the population of P. coronata f.sp. avenae in the U. S. is essential. A total of 570 single pustule isolates of oat crown rust were collected from cultivated and wild oat (Avena sativa and A. fatua, respectively) in the major oat production areas of the United States from 2006 through 2009. They were tested for virulence on seedlings of 31 differential oat lines in the greenhouse. A total of 201 races were found among the 357 isolates from the spring oat region of the northcentral US, and 140 races were found among 213 isolates from the southern winter oat region. The crown rust populations from the winter and spring oat regions were clearly differentiated from one another, differing in the frequency of virulence for 24 of the 31 differentials. Some virulence associations previously reported in the US oat crown rust population in were also found in both regions in this survey, even when the dataset was clone-corrected. Associations between virulence to the Pc genes were predominately positive in both regions, but both positive and negative associations occurred more frequently in the winter oat region where sexual reproduction does not occur. Some of the virulence diversity in the oat crown rust population in the United States can be related to the deployment of resistance genes in commercial oat cultivars and virulence associations existing in the oat crown rust population. When data from a previous report covering 2001 through 2005 is combined with data reported in this paper, the mean virulence of the U.S. populations of crown rust continued to increase from 2001 to 2009. Virulence to Pc38, Pc39, Pc45, Pc48, Pc52, Pc55, Pc56, Pc57, Pc59, Pc62, Pc63, Pc64, Pc68, and Pc96 significantly increased in one or both regions during this time period. No significant declines in virulence frequency were found in either region. Genes for crown rust resistance derived from A. sterilis appear to be rapidly defeated as has happened to Pc genes from A. sativa. There is an urgent need to find additional sources of effective resistance to P. coronata f.sp. avenae and introgress it into adapted oat cultivars.

Last Modified: 10/20/2014
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