Vegetable Crops Research Unit Site Logo
ARS Home About Us Helptop nav spacerContact Us En Espanoltop nav spacer
Printable VersionPrintable Version     E-mail this pageE-mail this page
Agricultural Research Service United States Department of Agriculture
Search
  Advanced Search
 
Programs and Projects
Subjects of Investigation
John Bamberg
Paul Bethke
Johanne Brunet
Dennis Halterman
Michael Havey
Shelley Jansky
Philipp Simon
David Spooner
Yiqun Weng
David Willis
IFAFS
 

Research Project: ALLIUM, CUCUMIS, AND DAUCUS GERMPLASM ENHANCEMENT, GENETICS, AND BIOCHEMISTRY

Location: Vegetable Crops Research Unit

Title: Molecular mapping of genes for compact growth habit and fruit spine color in cultivated cucumber (Cucumis sativus var. sativus L.)

Authors
item Li, Yuhong -
item Weng, Yiqun

Submitted to: Plant and Animal Genome Conference
Publication Type: Abstract Only
Publication Acceptance Date: December 15, 2010
Publication Date: December 15, 2010
Citation: Li, Y., Weng, Y. 2010. Molecular mapping of genes for compact growth habit and fruit spine color in cultivated cucumber (Cucumis sativus var. sativus L.) [abstract]. Plant and Animal Genome Conference. P324.

Technical Abstract: The compact (dwarf) plant architecture and fruit spine color are two important traits in cucumber breeding, which are controlled by simply inherited recessive (cp) and dominant (B) genes, respectively. In the present study, linkage analysis of molecular markers with the two traits was conducted with an F2:3 mapping population that is segregating at both cp and B loci, which was developed from a cross between PI 308915 (compact plant architecture with white spine, light green mature fruit) and PI 249561 (regular plant architecture with black spine, yellow mature fruit). From 2,212 cucumber SSRs, 245 polymorphic markers (11.1% polymorphism) were identified and applied in 46 F2 plants, and 205 markers were finally mapped. Linkage analysis placed both cp and B at the opposite ends of cucumber Chromosome 4. Based on whole genome sequence information, more closely linked SSR or SNP markers were identified with a stepwise increase of mapping population size. So far, flanking molecular markers within 0.5 cM genetic distances for both targets genes and their associated scaffolds have been identified. Since no recombination was observed between black spine and yellow mature fruit color, molecular markers for black spine were also applicable for yellow mature fruit color.

   

 
Project Team
Simon, Philipp
Havey, Michael
Weng, Yiqun
 
Publications
   Publications
 
Related National Programs
  Plant Genetic Resources, Genomics and Genetic Improvement (301)
 
Related Projects
   TRANSLATIONAL GENOMICS OF ONION FOR PRIORITIZED PEST RESISTANCES
   TRANSLATIONAL GENOMICS OF ONION FOR PRIORITIZED PEST RESISTANCES (J. CRAIG VENTER INSTITUTE, INC.)
   TRANSLATIONAL GENOMICS OF ONION FOR PRIORITIZED PEST RESISTANCES (WASHINGTON STATE UNIV)
   DEPLOYING NUTRIENT-RICH NEMATODE RESISTANT CARROTS TO BENEFIT GROWERS, CONSUMERS, AND THE ENVIRONMENT
   DEPLOYING NUTRIENT-RICH NEMATODE RESISTANT CARROTS TO BENEFIT GROWERS, CONSUMERS, AND THE ENVIRONMENT
   DEPLOYING NUTRIENT-RICH NEMATODE RESISTANT CARROTS TO BENEFIT GROWERS, CONSUMERS, AND THE ENVIRONMENT
   WHOLE GENOME APPROACH FOR GENETIC ANALYSIS IN CUCUMBER: FRUIT SIZE AS A TEST CASE
   QTL MAPPING OF FRUIT SIZE IN CUCUMBER
   TRANSLATIONAL GENOMICS FOR RECESSIVE DISEASE RESISTANCE IN CUCUMBER
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   TRANSLATIONAL GENOMICS FOR RECESSIVE DISEASE RESISTANCE IN CUCUMBER (MSU)
   TRANSLATIONAL GENOMICS FOR RECESSIVE DISEASE RESISTANCE IN CUCUMBER (NCSU)
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   Carrot Improvement for Organic Agriculture with Added Grower and Consumer Value
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   CARROT IMPROVEMENT FOR ORGANIC AGRICULTURE WITH ADDED GROWER AND CONSUMER VALUE
   Carrot and Onion Seed Production and Related Postharvest Innovations to Provide Well-adapted and Nutritious Vegetables for Bangladesh
   CARROT AND ONION SEED PRODUCTION AND RELATED POSTHARVEST INNOVATIONS TO PROVIDE WELL-ADAPTED AND NUTRITIOUS VEGETABLES FOR BANGLADESH
   Translational Genomics in Cucumber - Tool Development and Application for Recessive Disease Resistances
 
 
Last Modified: 05/25/2013
ARS Home | USDA.gov | Site Map | Policies and Links 
FOIA | Accessibility Statement | Privacy Policy | Nondiscrimination Statement | Information Quality | USA.gov | White House