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8b
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Phytophthora genus-specific primers - forward

 

 

 

 

 

 

 

 

 

 

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Magnolia pyramidata (U42696)

A

G

T

A

C

A

A

C

G

A

G

A

A

G

G

A

G

T

T

T

A

C

T

A

T

G

G

T

C

A

G

T

G

C

A

G

W

G

A

Pisum sativum

G

N

T

A

C

A

A

C

G

A

G

A

A

G

G

G

G

T

T

T

A

C

T

A

T

G

G

T

C

A

G

T

G

C

A

G

T

G

A

Triticum aestivum

G

G

T

A

C

A

A

C

G

A

G

A

A

G

G

A

G

N

N

T

A

C

T

A

T

G

G

T

C

A

G

T

G

C

A

G

T

G

A

Zea mays

G

G

T

A

C

A

A

C

G

A

G

A

A

G

G

A

G

T

T

T

A

C

T

A

T

G

G

T

C

A

G

T

G

C

A

G

T

G

A

Py. amasculinum(Authority)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

C

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. aphanidermatum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. aristosporum (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. arrhenomanes (Australia)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. aristosporum (New York)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. catenulatum (India)

C

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

C

A

G

T

G

A

Py. deliense (Arizona)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. dissimile (Authority)

T

A

T

C

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. dissotocum (California)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

G

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. erinacieum (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. graminicola (Jamaica)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. grandisporangium (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. heterothallicum (Canada1)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. insidiosum (Costa Rica)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. irregulare (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. irregulare (Washington)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

A

G

T

A

T

T

T

T

A

C

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. irregulare (Mississippi)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. iwayami (Japan)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. lucens (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. mamillatum (California)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. myriotylum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

C

T

A

C

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. nunn (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. okanoganse (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. oligandrum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

C

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. opalinum (TYPE)

T

A

T

A

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. paddicum (Japan)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. plurisporum (TYPE)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

C

A

G

C

G

A

Py. pulchrum (Ohio)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. pyrilobum (Authority)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

C

T

A

C

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. rostratum (Australia)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

C

T

A

T

G

G

T

C

A

A

T

G

T

A

G

C

G

A

Py. spinosum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. splendens (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. sulcatum (Wisconsin)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

C

T

A

C

G

G

T

C

A

A

T

G

T

A

G

C

G

A

Py. sylvaticum (Tennessee 1)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. torulosum (Ohio)

C

A

T

C

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. ultimum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. ultimum v spor (Maryland)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. ultimum v spor (Spain)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

HS Py. ultimum (Arizona1)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

HS Py. ultimum (Florida)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

HS Py. ultimum (Iowa)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. vanterpoolii (Authority)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Py. volutum (Washington)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

A

T

T

T

T

A

T

G

G

T

C

A

A

T

G

T

A

G

T

G

A

Ph. boehemeriae (325)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. cactorum (311)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. capsci (302)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. cinnamomi (Cn-2)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. citricola (Cr-4)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. colocasiae (345)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. dreschleri (301)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. erythroseptica (388)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. fragariae (394)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

A

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. fragariae rubi (397)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

A

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. gonapodyides (393)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

G

T

T

T

T

A

C

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. heveae (Hv-2)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. hibernalis (338)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

C

C

G

A

Ph. hibernalis (379)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

C

G

A

Ph. ilicis (344)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. infestans (580)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. lateralis (452)

T

A

T

T

A

A

A

A

G

G

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. mirabilis (340)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. megasperma

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

C

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. megakarya (327)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. megakarya (Mg-1)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. mirabolis (342)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. nicotianae (332)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. palmivora (328)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. palmivora (Pl-14)

T

A

T

A

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. phaseoli (330)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. pseudosyringae (470)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. pseudotsugae (308)

T

A

T

T

A

A

A

A

G

A

A

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. ramorum (016)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. sojae (312)

T

A

T

T

A

A

A

A

G

A

G

A

G

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. syringae (468)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

Ph. syringae (469)

T

A

T

T

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

G

T

G

A

FMPhy-8b

-

-

-

-

A

A

A

A

G

A

G

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

-

-

-

-

-

-

-

-

-

-

-

FMPhy-8

-

-

-

-

-

-

-

-

-

-

-

A

A

G

G

T

G

T

T

T

T

T

T

A

T

G

G

A

C

A

A

T

G

T

A

-

-

-

-