ARS Home
» Pacific West Area
» Salinas, California
» Crop Improvement and Protection Research
» Docs
» 10b
| 10b |
|
Phytophthora genus-specific primer - reverse
Phy-10b spans base 73-98 in the cox I gene
| * | * | * | * | * | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta vulgaris (X57693) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | C | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Betula papyrifera (U77620) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Chamaerops humilis (U77621) | G | G | A | T | A | T | C | G | G | T | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | A | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Glycine max (M16884) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Lycopersicum esculentum (X54738) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | T | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Magnolia stellata (U77622) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | C | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Oryza sativa (X15990) | G | G | A | T | A | T | C | G | G | T | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | A | G | G | A | G | T | G | A | T | G | G |
| Pisum sativum (X1440) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Populus tremuloides (U77623) | G | G | A | T | A | T | C | G | G | T | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | C | T | C | A | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Sabel palmetto (U77624) | G | G | A | T | A | T | C | G | G | T | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | C | T | C | A | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Solanum tuberosum (AF096321) | G | G | A | T | A | T | A | G | G | G | A | C | T | C | T | T | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | T | G | G | A | G | T | G | A | T | G | G |
| Triticum aestivum (Y00417) | G | G | A | T | A | T | T | G | G | G | A | C | T | C | T | C | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | A | G | G | A | G | T | G | A | T | G | G |
| Zea mays (X02660) | G | G | A | T | A | T | C | G | G | T | A | C | T | C | T | A | T | A | T | T | T | C | A | T | C | T | T | C | G | G | T | G | C | C | A | T | T | G | C | A | G | G | A | G | T | G | A | T | G | G |
| Chondrus crispus (Z47547) | A | G | A | T | A | T | T | G | G | T | A | C | T | C | T | T | T | A | T | C | T | A | A | T | T | T | T | C | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | T | T | T | A | G |
| Py. aphanidermatum (1992-31) | A | G | A | T | A | T | C | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | A | G | T | T | G |
| Py. aphanidermatum (1991-3) | A | G | A | T | A | T | C | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | A | G | T | T | G |
| Py. deliense (1986-19) | A | G | A | T | A | T | A | G | G | T | A | C | A | T | T | A | T | A | C | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | A | G | T | T | G |
| Py. irregulare (1987-97) | A | G | A | C | A | T | A | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | A | G | T | A | G |
| Py. oligandrum (1986-41) | A | G | A | T | A | T | T | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | C | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | T | G | T | T | G |
| Py. ultimum (1987-92) | A | G | A | C | A | T | T | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | A | G | G | T | G | T | A | G | T | T | G |
| Py. ultimum spor. (1993-26) | A | G | A | C | A | T | A | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | G | G | T | G | C | T | T | T | T | T | C | T | G | G | T | G | T | A | G | T | T | G |
| Ph. cactorum (385) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | T | G |
| Ph. capsici (302) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | G | G | G | T | G | T | T | G | T | T | G |
| Ph. colocasiae (345) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | G | G | G | T | G | T | T | G | T | T | G |
| Ph. erythroseptica (366) | A | G | A | T | A | T | T | G | G | G | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | G | G | G | T | G | T | T | G | T | T | G |
| Ph. fragariae frag. (394) | A | G | A | T | A | T | C | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | G | G | G | T | A | T | T | G | T | T | G |
| Ph. gonapodyides (393) | A | G | A | T | A | T | T | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | A | T | T | G | T | T | G |
| Ph. hibernalis (338) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | A | T | T | G | T | T | G |
| Ph. ilicis (344) | A | G | A | T | A | T | T | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | A | G |
| Ph. infestans (580) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | T | G |
| Ph. megasperma (L04457) | A | G | A | T | A | T | T | G | G | T | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | A | T | T | G | T | T | G |
| Ph. mirabilis (340) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | T | G |
| Ph. nicotianiae (332) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | A | G |
| Ph. phaseoli (330) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | T | G |
| Ph. pseudotsugae (308) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | G | T | T | G | T | T | G |
| Ph. ramorum (ph016) | A | G | A | T | A | T | T | G | G | A | A | C | T | T | T | A | T | A | T | T | T | A | A | T | T | T | T | T | A | G | T | G | C | T | T | T | T | G | C | T | G | G | T | A | T | T | G | T | T | G |
| FMPhy-10 (reverse) | - | - | - | - | - | - | - | - | - | - | - | - | A | A | A | T | A | T | A | A | A | T | T | A | A | A | A | A | T | C | A | C | G | A | A | A | A | C | G | - | - | - | - | - | - | - | - | - | - | - |
| FMPhy-10b (reverse) | - | - | - | - | - | - | - | - | - | - | - | - | - | A | A | T | A | T | A | A | A | T | T | A | A | A | A | A | T | C | A | C | G | A | A | A | A | C | G | - | - | - | - | - | - | - | - | - | - | - |
