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Jim Holland (Jim) (PhD)
Plant Science Research
Research Geneticist (Plants)

Phone: (919) 513-4198
Fax:

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Projects
Heirlooms of the United States, Southeast Evaluation
Cooperative Agreement (A)
  Accession Number: 445723
Heirlooms of the United States, Midwest Evaluation
Cooperative Agreement (A)
  Accession Number: 445724
Genetic Diversity and Disease Resistance in Maize
In-House Appropriated (D)
  Accession Number: 443938
Genomic Selection is Looming: Building a Robust Genotype-to-Phenotype Platform to Revolutionize Public Cotton Breeding
Interagency Reimbursable Agreement (I)
  Accession Number: 441416
Genomes to Fields Landrace Evaluations
Non-Assistance Cooperative Agreement (S)
  Accession Number: 445540
Genotype-Environment Interactions and Transcriptomic Prediction of Hybrid Maize Yield
Non-Assistance Cooperative Agreement (S)
  Accession Number: 438027
Maize GXE and Germplasm Enhancement of Maize (GEM) Cooperation – Phase 2
Non-Assistance Cooperative Agreement (S)
  Accession Number: 440671

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Don’t BLUP twice - (Peer Reviewed Journal)
Impact of genotype x environment interaction and selection history on genomic prediction in maize (Zea mays L.) Reprint Icon - (Peer Reviewed Journal)
Costa, M., Holland, J.B., De Leon, N., Kaeppler, S.M. 2024. Impact of genotype x environment interaction and selection history on genomic prediction in maize (Zea mays L.) . Crop Science. 64(6):3293-3310. https://doi.org/10.1002/csc2.21379.
Prediction of resistance, virulence, and host-by-pathogen interactions using dual genome prediction models Reprint Icon - (Peer Reviewed Journal)
Owen, H., Resende, M., Messina, C., Holland, J.B., Brawner, J. 2024. Prediction of resistance, virulence, and host-by-pathogen interactions using dual genome prediction models. Theoretical and Applied Genetics. 137:196. https://doi.org/10.1007/s00122-024-04698-7.
Characterization of southeastern United States open-pollinated maize landraces Reprint Icon - (Peer Reviewed Journal)
Woore, M.S., Flint Garcia, S.A., Holland, J.B. 2024. Characterization of southeastern United States open-pollinated maize landraces. Crop Science. 64:772-787. https://doi.org/10.1002/csc2.21198.
Variability structure and heritability of germination timing in Capsella bursa-pastoris (L.) Medik (Shepherd’s purse) Reprint Icon - (Peer Reviewed Journal)
Dobbs, A., Sousa-Ortega, C., Holland, J.B., Snyder, L., Leon, R. 2024. Variability structure and heritability of germination timing in Capsella bursa-pastoris (L.) Medik (Shepherd’s purse). Weed Research. 64(1):1-7. https://doi.org/10.1111/wre.12605.
Bearded or Smooth? Awns improve yield when wheat experiences heat stress during grain fill in the southeastern United States Reprint Icon - (Peer Reviewed Journal)
Dewitt, N., Lyerly, J., Guedira, M., Holland, J.B., Murphy, J., Ward, B.P., Boyles, R.E., Mergoum, M., Babar, M., Shakiba, E., Ibrahim, A., Tiwari, V., Santantonio, N., Van Sanford, D., Harrison, S.A., Brown Guedira, G.L. 2023. Bearded or Smooth? Awns improve yield when wheat experiences heat stress during grain fill in the southeastern United States. Journal of Experimental Botany. 74(21):6749-6759. https://doi.org/10.1093/jxb/erad318.
2020-2021 Field seasons of maize G x E project within maize genomes to fields initiative Reprint Icon - (Peer Reviewed Journal)
Lima, D., Castro, A., Alpers, T., Perkins, A., De Leon, N., Kaeppler, S., Ertl, D., Romay, C., Gage, J., Holland, J.B., Thompson, A., Hirsch, C., Hooker, D., Buckler Iv, E.S., Schnable, J., Wallace, J., Edwards, J.W., Knoll, J.E., Singh, M., Bohn, M., Tuinstra, M., Thomison, P., Sekhon, R., Minyo, R., Murray, S., Flint Garcia, S.A., Weldekidan, T., Beissinger, T., Xu, W. 2023. 2020-2021 Field seasons of maize G x E project within maize genomes to fields initiative. BMC Research Notes. 16, 219 (2023). https://doi.org/10.1186/s13104-023-06430-y.
Genomes to fields 2022 maize genotype by environment prediction competition Reprint Icon - (Peer Reviewed Journal)
Lima, D.C., Washburn, J.D., Varela, J.I., Chen, Q., Gage, J.L., Romay, M.C., Holland, J.B., Ertl, D., Lopez-Cruz, M., Aguate, F.M., De Los Campos, G., Kaeppler, S., Beissinger, T., Bohn, M., Buckler IV, E.S., Edwards, J.W., Flint Garcia, S.A., Gore, M.A., Hirsch, C.N., Knoll, J.E., Mckay, J., Minyo, R., Murray, S.C., Ortez, O.A., Schnable, J., Sekhon, R.S., Singh, M.P., Sparks, E.E., Thompson, A., Tuinstra, M., Wallace, J., Weldekidan, T., Xu, W., De Leon, N. 2023. Genomes to fields 2022 maize genotype by environment prediction competition. BMC Research Notes. 16: Article 148. https://doi.org/10.1186/s13104-023-06421-z.
Enhancing adaptation of tropical maize to temperate environments using genomic selection Reprint Icon - (Peer Reviewed Journal)
Choquette, N., Weldekidan, T., Brewer, J.C., Davis, S., Wisser, R., Holland, J.B. 2023. Enhancing adaptation of tropical maize to temperate environments using genomic selection. G3, Genes/Genomes/Genetics. 13(9):jkad141. https://doi.org/10.1093/g3journal/jkad141.
2018-2019 field seasons of the maize genomes to fields (G2F) G x E project Reprint Icon - (Peer Reviewed Journal)
Lima, D., Castro Aviles, A., Alpers, T., Mcfarlan, B., Kaeppler, S., Ertl, D., Romay, C., Gage, J., Holland, J.B., Beissinger, T., Bohn, M., Buckler, E., Edwards, J., Flint-Garcia, S., Hirsch, C., Hood, E., Hooker, D., Knoll, J., Kolkman, J., Liu, S., Mckay, J., Minyo, R., Moreta, D.E., Murray, S., Nelson, R., Schnable, J., Sekhon, R., Singh, M., Thomison, P., Thompson, A., Tuinstra, M., Wallace, J., Washburn, J.D., Weldekidan, T., Wisser, R., Xu, W. 2023. 2018-2019 field seasons of the maize genomes to fields (G2F) G x E project. BMC Genomic Data. 24:29. https://doi.org/10.1186/s12863-023-01129-2.
Characterization of a host-specific toxic activity produced by Bipolaris cookei, causal agent of Target Leaf Spot of Sorghum Reprint Icon - (Peer Reviewed Journal)
Samira, R., Lopez, L.F., Holland, J.B., Balint Kurti, P.J. 2023. Characterization of a host-specific toxic activity produced by Bipolaris cookei, causal agent of Target Leaf Spot of Sorghum. Phytopathology. 113(7):1301-1306. https://doi.org/10.1094/PHYTO-11-22-0427-R.
Environment-specific selection alters flowering-time plasticity and results in pervasive pleiotropic responses in maize Reprint Icon - (Peer Reviewed Journal)
Choquette, N.E., Holland, J.B., Weldekidan, T., Drouault, J., De Leon, N., Flint Garcia, S.A., Lauter, N.C., Murray, S., Xu, W., Wisser, R. 2023. Environment-specific selection alters flowering-time plasticity and results in pervasive pleiotropic responses in maize. New Phytologist. 238(2):737-749. https://doi.org/10.1111/nph.18769.
Scale up trials to validate modified crops' benefits Reprint Icon - (Peer Reviewed Journal)
Khaipho-Burch, M., Cooper, M., Crossa, J., De Leon, N., Holland, J.B., Lewis, R., Mccouch, S., Murray, S., Rabbi, I., Ronald, P., Ross-Ibarra, J., Weigel, D., Buckler IV, E.S. 2023. Scale up trials to validate modified crops' benefits. Nature. 621:470-473. https://doi.org/10.1038/d41586-023-02895-w.
Genomic prediction for the germplasm enhancement of maize project Reprint Icon - (Peer Reviewed Journal)
Rogers, A., Bian, Y., Krakowsky, M.D., Peters, D.W., Turnbull, C., Nelson, P., Holland, J.B. 2022. Genomic prediction for the germplasm enhancement of maize project. The Plant Genome. 15:4. https://doi.org/10.1002/tpg2.20267.
Empirical comparison of genomic and phenotypic selection for resistance to Fusarium ear rot and fumonisin contamination in maize Reprint Icon - (Peer Reviewed Journal)
Butoto, E., Brewer, J.C., Holland, J.B. 2022. Empirical comparison of genomic and phenotypic selection for resistance to Fusarium ear rot and fumonisin contamination in maize. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-022-04150-8.
Outlook for implementation of genomics-based selection in public cotton breeding programs Reprint Icon - (Peer Reviewed Journal)
Billings, G.T., Jones, M.A., Rustgi, S., Bridges, W.C., Holland, J.B., Hulse-Kemp, A.M., Campbell, B.T. 2022. Outlook for implementation of genomics-based selection in public cotton breeding programs. Plants. 11(11). https://doi.org/10.3390/plants11111446.
Environment-specific genomic prediction ability in maize using environmental covariates depends on environmental similarity to training data Reprint Icon - (Peer Reviewed Journal)
Rogers, A., Holland, J.B. 2021. Environment-specific genomic prediction ability in maize using environmental covariates depends on environmental similarity to training data. G3, Genes/Genomes/Genetics. https://doi.org/10.1093/g3journal/jkab440.
Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte Reprint Icon - (Peer Reviewed Journal)
Samayoa, L., Olukolu, B.A., Yang, C.J., Chen, Q., Stetter, M.G., York, A.M., Sanchez-Gonzalez, J., Glaubitz, J.C., Bradbury, P., Cinta Romay, M., Sun, Q., Yang, J., Ross-Ibarra, J., Buckler IV, E.S., Doebley, J.F., Holland, J.B. 2021. Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte. PLoS Genetics. 2:1009797. https://doi.org/10.6084/m9.figshare.14750790.
Registration of tropical populations of maize selected in parallel for early flowering time across the United States Reprint Icon - (Peer Reviewed Journal)
Weldekidan, T., Manching, H., Choquette, N., de Leon, N., Flint-Garcia, S.A., Holland, J.B., Lauter, N.C., Murray, S.C., Xu, W., Goodman, M., Wisser, R.J. 2022. Registration of tropical populations of maize selected in parallel for early flowering time across the United States. Journal of Plant Registrations. 16(1):100-108. https://doi.org/10.1002/plr2.20181.
Drought resilience in CIMMYT maize lines adapted to Africa resulting from transpiration sensitivity to vapor pressure deficit and soil drying Reprint Icon - (Peer Reviewed Journal)
Chiango, H., Jafarikouhini, N., Pradhan, D., Figueriedo, A., Silva, J., Sinclair, T.R., Holland, J.B. 2021. Drought resilience in CIMMYT maize lines adapted to Africa resulting from transpiration sensitivity to vapor pressure deficit and soil drying. Euphytica. 3:301-315. https://doi.org/10.1080/15427528.2021.1961334.
The potential to breed a low-protein maize for protein-restricted diets Reprint Icon - (Peer Reviewed Journal)
Woore, M.S., Flint Garcia, S.A., Holland, J.B. 2021. The potential to breed a low-protein maize for protein-restricted diets. Crop Science. 61(6):4202-4217. https://doi.org/10.1002/csc2.20600.
Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize Reprint Icon - (Peer Reviewed Journal)
Butoto, E., Marino, T., Holland, J.B. 2021. Effects of artificial inoculation on trait correlations with resistance to Fusarium ear rot and fumonisin contamination in maize. Crop Science. 61:2522-2533. https://doi.org/10.1002/csc2.20551.
Characterizing the oligogenic architecture of plant growth phenotypes informs genomic selection approaches in a common wheat population Reprint Icon - (Peer Reviewed Journal)
De Witt, N., Guedira, M., Lauer, E., Murphy, J.P., Marshall, D.S., Mergoum, M., Johnson, J., Holland, J.B., Brown Guedira, G.L. 2021. Characterizing the oligogenic architecture of plant growth phenotypes informs genomic selection approaches in a common wheat population. BMC Genomics. 22:402. https://doi.org/10.1186/s12864-021-07574-6.
Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain Reprint Icon - (Peer Reviewed Journal)
Diepenbrock, C.H., Ilut, D.C., Magallanes-Lundback, M., Kandianis, C.B., Lipka, A.E., Bradbury, P., Holland, J.B., Hamilton, J.P., Wooldridge, E., Vaillancourt, B., Góngora-Castillo, E., Wallace, J.G., Cepela, J., Mateos-Hernandez, M., Owens, B.F., Tiede, T., Buckler IV, E.S., Rocheford, T., Buell, C., Gore, M.A., Dellapenna, D. 2021. Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain. The Plant Cell. 33(4):882–900. https://doi.org/10.1093/plcell/koab032.
Development and use of a seedling growth retardation assay to quantify and map loci underlying variation in the maize basal defense response Reprint Icon - (Peer Reviewed Journal)
Wang, Y., Holland, J.B., Balint Kurti, P.J. 2021. Development and use of a seedling growth retardation assay to quantify and map loci underlying variation in the maize basal defense response. Phytofrontiers. https://doi.org/10.1094/PHYTOFR-12-20-0038-R.
Utility of climatic information via combining ability models to improve genomic prediction for yield within the genomes to fields maize project Reprint Icon - (Peer Reviewed Journal)
Jarquin, D., De Leon, N., Romay, M., Bohn, M., Buckler IV, E.S., Ciampitti, I., Edwards, J.W., Ertl, D., Flint Garcia, S.A., Gore, M.A., Graham, C., Hirsch, C.N., Holland, J.B., Hooker, D., Kaeppler, S.M., Knoll, J.E., Lee, E.S., Lawrence-Dill, C.J., Lynch, J.P., Moose, S.P., Murray, S.C., Nelson, R., Rocheford, T., Schnable, J.C., Schnable, P.S., Smith, M., Springer, N., Thomison, P., Tuinstra, M., Wisser, R.J., Xu, W., Lorenz, A. 2021. Utility of climatic information via combining ability models to improve genomic prediction for yield within the genomes to fields maize project. Frontiers in Genetics. 11:592769. https://doi.org/10.3389/fgene.2020.592769.
The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment Reprint Icon - (Peer Reviewed Journal)
Rogers, A.R., Dunne, J.C., Romay, C., Bohn, M., Buckler IV, E.S., Ciampitti, I.C., Edwards, J.W., Ertl, D., Flint Garcia, S.A., Gore, M.A., Graham, C., Hirsch, C.N., Hood, E., Hooker, D.C., Knoll, J.E., Lee, E.C., Lorenz, A., Lynch, J.P., Mckay, J., Moose, S.P., Murray, S.C., Nelson, R., Rocheford, T., Schnable, J.C., Schnable, P.S., Sekhon, R., Singh, M., Smith, M., Springer, N., Thelen, K., Thomison, P., Thompson, A., Tuinstra, M., Wallace, J., Wisser, R.J., Xu, W., Gilmour, A., Kaeppler, S.M., Deleon, N., Holland, J.B. 2021. The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment. Genes, Genomes, Genetics. https://doi.org/10.1093/g3journal/jkaa050.
The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment Reprint Icon - (Peer Reviewed Journal)
Rogers, A.R., Dunne, J.C., Romay, M.C., Bohn, M., Buckler IV, E.S., Ciampitti, I.C., Edwards, J.W., Ertl, D., Flint Garcia, S.A., Gore, M.A., Graham, C., Hirsch, C.N., Hood, E.C., Hooker, D., Knoll, J.E., Lee, E.C., Lorenz, A., Lynch, J.P., Mckay, J., Moose, S.P., Murray, S.C., Nelson, R., Rocheford, T., Schnable, J.C., Schnable, P.S., Sekhon, R., Singh, M., Smith, M., Springer, N., Thelen, K., Thomison, P., Thompson, A., Tuinstra, M., Wallace, J., Wisser, R., Xu, W., Gilmour, A., Kaeppler, S.M., Deleon, N., Holland, J.B. 2021. The importance of dominance and genotype-by-environment interactions on grain yield variation in a large-scale public cooperative maize experiment. Genes, Genomes, Genetics. 11(2):jkaa050. https://doi.org/10.1093/g3journal/jkaa050.
Genome-wide association analysis of the strength of the MAMP-elicited defense response and resistance to target leaf spot in sorghum Reprint Icon - (Peer Reviewed Journal)
Samira, R., Kimball, J.A., Samayoa-Lopez, L.F., Holland, J.B., Jamann, T.M., Brown, P.J., Stacey, G., Balint Kurti, P.J. 2020. Genome-wide association analysis of the strength of the MAMP-elicited defense response and resistance to target leaf spot in sorghum. Scientific Reports. https://doi.org/10.1038/s41598-020-77684-w.
Eleven biosynthetic genes explain the majority of natural variation for carotenoid levels in maize grain Reprint Icon - (Pre-print Publication)
Diepenbrock, C.H., Llut, D.C., Magallanes-Lundback, M., Kandianis, C.B., Lipka, A.E., Bradbury, P., Holland, J.B., Hamilton, J.P., Wooldridge, E., Vaillancourt, B., Gongora-Castillo, E., Wallace, J.G., Capela, J., Mateos-Hernandez, M. 2020. Eleven biosynthetic genes explain the majority of natural variation for carotenoid levels in maize grain. bioRxiv. https://doi.org/10.1101/2020.07.15.203448.
Association mapping and genomic prediction for ear rot disease caused by Fusarium verticillioides in a tropical maize germplasm - (Peer Reviewed Journal)
Kuki, M., Pinto, R.B., Bertagna, F.B., Tessmann, D., Teixeira Do Amaral, A.J., Scapim, C., Holland, J.B. 2020. Association mapping and genomic prediction for ear rot disease caused by Fusarium verticillioides in a tropical maize germplasm. Crop Science. 60:2867-2881.
Heterosis of leaf and rhizosphere microbiomes in field-grown maize Reprint Icon - (Peer Reviewed Journal)
Wagner, M.R., Roberts, J.H., Balint Kurti, P.J., Holland, J.B. 2020. Heterosis of leaf and rhizosphere microbiomes in field-grown maize. New Phytologist. https://doi.org/10.1111/nph.16730.
The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication - (Peer Reviewed Journal)
Chen, Q., Samayoa, L., Yang, C.J., Bradbury, P., Olukolu, B., Neumeyer, M.A., Tomay, M., Sun, Q., Lorant, A., Buckler IV, E.S., Ross-Ibarra, J., Holland, J.B., Doebley, J.F. 2020. The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication. PLoS Genetics. 16(5):e1008791.
Genetic variation for response to mixed triazole and strobilurin application in diverse maize Reprint Icon - (Peer Reviewed Journal)
Woore, M., Holland, J.B. 2020. Genetic variation for response to mixed triazole and strobilurin application in diverse maize. Agrosystems, Geosciences & Environment. https://doi.org/10.1002/agg2.20054.
Genomic prediction for resistance to fusarium ear rot and fumonisin contamination in maize - (Peer Reviewed Journal)
Holland, J.B., Marino, T.P., Manching, H.C., Wisser, R.J. 2020. Genomic prediction for resistance to fusarium ear rot and fumonisin contamination in maize. Crop Science. 60:1863-1875.
A genome-wide association study to understand the effect of Fusarium verticillioides infection on seedlings of a maize diversity panel - (Peer Reviewed Journal)
Stagnati, L., Rahjoo, V., Samayoa, L.F., Holland, J.B., Busconi, M., Lanubile, A., Marocco, A. 2020. A genome-wide association study to understand the effect of Fusarium verticillioides infection on seedlings of a maize diversity panel. G3, Genes/Genomes/Genetics. 10:1685-1696.
Dominance effects and functional enrichments improve prediction of agronomic traits in hybrid maize Reprint Icon - (Peer Reviewed Journal)
Ramstein, G.P., Larsson, S.J., Cook, J.P., Edwards, J.W., Ersoz, E.S., Flint Garcia, S.A., Gardner, C.A., Holland, J.B., Lorenz, A.J., Mcmullen, M.D., Millard, M.J., Rocheford, T.R., Tuinstra, M.R., Bradbury, P., Buckler IV, E.S., Romay, M.C. 2020. Dominance effects and functional enrichments improve prediction of agronomic traits in hybrid maize. Genetics. 215:215-230. https://doi.org/10.1534/genetics.120.303025.
Maize genomes to fields (G2F): 2014 –2017 field seasons: genotype, phenotype, climatic, soil and inbred ear image datasets Reprint Icon - (Peer Reviewed Journal)
Mcfarland, B.A., Alkhalifah, N., Bohn, M., Bubert, J., Buckler IV, E.S., Ciampitti, I., Edwards, J.W., Ertl, D., Gage, J.L., Falcon, C.M., Flint Garcia, S.A., Gore, M., Graham, C., Hirsch, C., Holland, J.B., Hood, E., Hooker, D., Jarquin, D., Kaeppler, S., Knoll, J.E., Kruger, G., Lauter, N.C., Lee, E.C., Lima, D.C., Lorenz, A., Lynch, J.P., Mckay, J., Miller, N.D., Moose, S.P., Murray, S.C., Nelson, R., Poudyal, C., Rocheford, T., Rodriguez, O., Romay, M., Schnable, J.C., Schnable, P.S., Scully, B.T., Sekhon, R., Silverstein, K., Singh, M., Smith, M., Spalding, E.P., Springer, N., Thelen, K., Thomison, P., Tuinstra, M., Wallace, J., Walls, R., Wills, D., Wisser, R.J., Xu, W., Yeh, C., De Leon, N. Maize genomes to fields (G2F): 2014 –2017 field seasons: genotype, phenotype, climatic, soil and inbred ear image datasets. BMC Research Notes. 13,71 (2020). https://doi.org/10.1186/s13104-020-4922-8.
The genomic basis for short-term evolution of environmental adaptation in maize Reprint Icon - (Peer Reviewed Journal)
Wisser, R.J., Fang, Z., Holland, J.B., Teixeira, J.E., Dougherty, J., Weldekidan, T., De Leon, N., Flint-Garcia, S.A., Lauter, N.C., Murray, S.C., Xu, W., Hallauer, A. 2019. The genomic basis for short-term evolution of environmental adaptation in maize. Genetics. 213(4):1479-1494. https://doi.org/10.1534/genetics.119.302780.
Relative utility of agronomic, phenological, and morphological traits for assessing genotype-by-environment interaction in maize inbreds Reprint Icon - (Peer Reviewed Journal)
Falcon, C.M., Kaeppler, S.M., Spalding, E.P., Miller, N.D., Haase, N., Alkhalifah, N., Bohn, M., Buckler IV, E.S., Campbell, D.A., Ciampitti, I., Coffey, L., Edwards, J.W., Ertl, D., Flint Garcia, S.A., Gore, M.A., Graham, C., Hirsch, C.N., Holland, J.B., Jarquin, D., Knoll, J.E., Lauter, N.C., Lawrence-Dill, C.J., Lee, E.C., Lorenz, A., Lynch, J.P., Murray, S.C., Nelson, R., Romay, M., Rocheford, T., Schnable, P., Scully, B.T., Smith, M.C., Springer, N., Tuinstra, M., Walton, R., Weldekidan, T., Wisser, R.J., Xu, W., De Leon, N. Relative utility of agronomic, phenological, and morphological traits for assessing genotype-by-environment interaction in maize inbreds. Crop Science. 2020; 60:62-81. https://doi.org/10.1002/csc2.20035
Validation of multiple disease resistance QTL from chromosome segment substitution population in F2:3 family populations - (Peer Reviewed Journal)
Martin, L., Rucker, E., Thomason, W., Holland, J.B., Wisser, R., Balint Kurti, P.J. 2019. Validation of multiple disease resistance QTL from chromosome segment substitution population in F2:3 family populations. G3, Genes/Genomes/Genetics. 9:2905-2912.
Genome-wide association study of popping expansion in tropical popcorn and field corn germplasm - (Peer Reviewed Journal)
Camargo Senhorinho, H.J., Dacal Coan, M.M., Marino, T.P., Kuki, M.C., Barth Pinto, R.J., Scapim, C.A., Holland, J.B. 2019. Genome-wide association study of popping expansion in tropical popcorn and field corn germplasm. Crop Science. 59:2007–2019.
The genetic architecture of teosinte catalyzed and constrained maize domestication - (Peer Reviewed Journal)
Yang, C., Samayoa, L., Bradbury, P., Olukolu, B.A., Xue, W., York, A.M., Tuholski, M.R., Wang, W., Daskalska, L.L., Neumeyer, M.A., Sanchez-Gonzales, J., Romay, M.C., Glaubitz, J.C., Sun, Q., Buckler IV, E.S., Holland, J.B., Doebley, J.F. 2019. The genetic architecture of teosinte catalyzed and constrained maize domestication. Proceedings of the National Academy of Sciences. 116:5643-5652.
Diverse mechanisms of resistance to Fusarium verticillioides infection and fumonisin contamination in four maize recombinant inbred line families - (Peer Reviewed Journal)
Morales, L., Zila, C.T., Moreta Mejia, D.E., Montoya Arbelaez, M., Balint Kurti, P.J., Holland, J.B., Nelson, R.J. 2019. Diverse mechanisms of resistance to Fusarium verticillioides infection and fumonisin contamination in four maize recombinant inbred line families. Toxins. 11:86.
Training population selection and use of fixed effects to optimize genomic predictions in a historical USA winter wheat panel - (Peer Reviewed Journal)
Sarinelli, J.M., Murphy, J.P., Tyagi, P., Holland, J.B., Johnson, J.W., Mergoum, M., Mason, R.E., Babar, A., Harrison, S., Sutton, R., Griffey, C.A., Brown Guedira, G.L. 2019. Training population selection and use of fixed effects to optimize genomic predictions in a historical USA winter wheat panel. Theoretical and Applied Genetics. 132:1247.
Optimal designs for genomic selection in hybrid crops Reprint Icon - (Peer Reviewed Journal)
Guo, T., Yu, X., Li, X., Zhang, H., Zhu, C., Flint-Garcia, S.A., McMullen, M.D., Holland, J.B., Szalma, S.J., Wisser, R., Yu, J. 2019. Optimal designs for genomic selection in hybrid crops. Molecular Plant. 12(3):390-401. https://doi.org/10.1016/j.molp.2018.12.022.
A genome wide association study reveals markers and genes associated with Fusarium kernel rot resistance in a maize diversity panel - (Peer Reviewed Journal)
Stagnati, L., Lanubile, A., Samayoa, L., Bragalanti, M., Giorni, P., Busconi, M., Holland, J.B., Marocco, A. 2019. A genome wide association study reveals markers and genes associated with Fusarium kernel rot resistance in a maize diversity panel. Journal of Experimental Botany. 9:571-579.
Two steps on the path to maize adaptation - (Peer Reviewed Journal)
Holland, J.B. 2018. Two steps on the path to maize adaptation. Current Biology. 28(18):PR1098-R1101.
Dissecting symptomatology and fumonisin contamination produced by Fusarium verticillioides in maize ears - (Peer Reviewed Journal)
Morales, L., Marino, T.P., Wenndt, A.J., Fouts, J.Q., Holland, J.B., Nelson, R.J. 2018. Dissecting symptomatology and fumonisin contamination produced by Fusarium verticillioides in maize ears. Phytopathology. 108:1475-1485.
Maize genomes to fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets Reprint Icon - (Peer Reviewed Journal)
Alkhalifah, N., Campbell, D., Falcon, C., Miller, N., Romay, M., Walls, R., Walton, R., Yeh, C., Bohn, M., Buckler IV, E.S., Ciampitti, I., Flint Garcia, S.A., Gore, M., Graham, C., Hirsch, C., Holland, J.B., Hooker, D., Kaeppler, S., Knoll, J.E., Lauter, N.C., Lee, E., Lorenz, A., Lynch, J., Moose, S., Murray, S., Nelson, R., Rocheford, T., Rodriguez, O., Schnable, J., Scully, B.T., Smith, M., Springer, N., Thomison, P., Tuinstra, M., Wisser, R., Xu, W., Ertl, D., Schnable, P., De Leon, N., Spalding, E., Edwards, J.W., Lawrence-Dill, C. 2018. Maize genomes to fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets. Biomed Central (BMC) Plant Biology. 11:452. https://doi.org/10.1186/s13104-018-3508-1.
Harnessing maize biodiversity - (Book / Chapter)
Samayoa, L.F., Dunne, J.C., Andres, R.J., Holland, J.B. 2018. Harnessing maize biodiversity. In: Bennetzen, J., S. Flint-Garcia, C. Hirsch, and R. Tuberosa (Eds.) The Maize Genome. Springer, Switzerland. Book Chapeter. pg. 335-366.
Accounting for genotype–by-environment interactions and non-additive genetic variation in genomic selection for water-soluble carbohydrate concentration in wheat - (Peer Reviewed Journal)
Ovenden, B., Milgate, A., Wade, L.J., Rebetzke, G.J., Holland, J.B. 2018. Accounting for genotype–by-environment interactions and non-additive genetic variation in genomic selection for water-soluble carbohydrate concentration in wheat. Genetics. 8:1909-1919.
Combining genomic selection and gene identification for crop improvement - (Book / Chapter)
Ecogeography of teosinte Reprint Icon - (Peer Reviewed Journal)
Gonzales, J.S., Corral, J.R., Garcia, G.M., Ojeda, G.R., De La Cruz, L.L., Holland, J.B., Medrano, R.M., Romero, G.G. 2018. Ecogeography of teosinte. PLoS One. 13:e0192676. https://doi.org/10.1371/journal.pone.0192676.
The effect of artificial selection on phenotypic plasticity in maize Reprint Icon - (Peer Reviewed Journal)
Gage, J., Jarquin, D., Romay, M., Lorenz, A., Buckler IV, E.S., Kaeppler, S., Alkhalifah, N., Bohn, M., Campbell, D., Edwards, J.W., Ertl, D., Flint Garcia, S.A., Gardiner, J., Good, B., Hirsch, C., Holland, J.B., Hooker, D., Knoll, J.E., Kolkman, J., Kruger, G., Lauter, N.C., Lawrence-Dill, C., Lee, E., Lynch, J., Murray, S., Nelson, R., Petzoldt, J., Rocheford, T., Schnable, J., Schnable, P., Scully, B.T., Smith, M., Springer, N., Srinivasan, S., Walton, R., Weldekidan, T., Wisser, R., Xu, W., Yu, J., De Leon, N. 2017. The effect of artificial selection on phenotypic plasticity in maize. Nature Communications. 8:1348. https://doi.org/10.1038/S41467-017-01450-2.
Genetic analysis of lodging in diverse maize hybrids Reprint Icon - (Review Article)
Larsson, S.J., Peiffer, J.A., Edwards, J.W., Ersoz, E.S., Flint Garcia, S.A., Holland, J.B., Mcmullen, M.D., Tuinstra, M.R., Romay, M.C., Buckler Iv, E.S. 2017. Genetic analysis of lodging in diverse maize hybrids. bioRxiv. https://doi.org/10.1101/185769.
Defining the role of the MADS-box gene, Zea agamous like1, in maize domestication - (Peer Reviewed Journal)
Wills, D.M., Fang, Z., York, A., Holland, J.B., Doebley, J. 2018. Defining the role of the MADS-box gene, Zea agamous like1, in maize domestication. Journal of Heredity. 109:333-338.
Selection for water-soluble carbohydrate accumulation and investigation of genetic × environment interactions in an elite wheat breeding population - (Peer Reviewed Journal)
Ovenden, B., Milgate, A., Lisle, C.J., Wade, L.J., Rebetzke, G.J., Holland, J.B. 2017. Selection for water-soluble carbohydrate accumulation and investigation of genetic × environment interactions in an elite wheat breeding population. Theoretical and Applied Genetics. 130:2445-2461.
Genetic data analysis for plant and animal breeding - (Book / Chapter)
Isik, F., Holland, J.B., Maltecca, C. 2017. Genetic data analysis for plant and animal breeding. Springer, New York. 400 pp. Book Chapter.
Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America - (Peer Reviewed Journal)
Swartz, K., Gutaker, R.M., Benz, B., Blake, M., Bukowski, R., Holland, J.B., Kruse-Peeples, M., Lepak, N.K., Prim, L., Romay, M.C., Ross-Ibarra, J., Sanchez-Gonzalez, J., Schmidt, C., Schuenemann, V.J., Krause, J., Matson, R.G., Weigel, D., Buckler IV, E.S., Burbano, H.A. 2017. Genomic estimation of complex traits reveals ancient maize adaptation to temperate North America. Science. 357:512-515.
Genome-wide associations for water-soluble carbohydrate concentration and relative maturity in wheat using SNP and DArT marker arrays - (Peer Reviewed Journal)
Ovenden, B., Milgate, A., Wade, L.J., Rebetzke, G.J., Holland, J.B. 2017. Genome-wide associations for water-soluble carbohydrate concentration and relative maturity in wheat using SNP and DArT marker arrays. G3, Genes/Genomes/Genetics. 7(8):2821-2830.
Enhancing genomic prediction with genome-wide association studies in multiparental maize populations - (Peer Reviewed Journal)
Bian, Y., Holland, J.B. 2017. Enhancing genomic prediction with genome-wide association studies in multiparental maize populations. Heredity. 118:585–593.
High-Throughput resequencing of maize landraces at genomic regions associated with flowering time - (Peer Reviewed Journal)
Jamann, T., Sood, S., Wisser, R., Holland, J.B. 2017. High-Throughput resequencing of maize landraces at genomic regions associated with flowering time. PLoS One. 12:e0168910.
Modifications to a LATE MERISTEM IDENTITY-1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.) - (Peer Reviewed Journal)
Andres, R.J., Coneva, V., Frank, M.H., Tuttle, J.R., Samayoa, L.F., Han, S., Kaur, B., Zhu, L., Fang, H., Bowman, D.T., Rojas-Pierce, M., Haigler, C.H., Jones, C., Holland, J.B., Chitwood, D.H., Kuraparthy, V. 2016. Modifications to a LATE MERISTEM IDENTITY-1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.). Proceedings of the National Academy of Sciences. 114:E57-E66.
Population extremes for assessing trait value and correlated response of genetically complex traits - (Peer Reviewed Journal)
Rebetzke, G., Richards, R., Holland, J.B. 2017. Population extremes for assessing trait value and correlated response of genetically complex traits. Field Crops Research. 201:122-132.
The genetics of leaf flecking in maize and its relationship to plant defense and disease resistance - (Peer Reviewed Journal)
Olukolu, B., Bian, Y., De Vries, B., Tracy, W.F., Wisser, R., Holland, J.B., Balint Kurti, P.J. 2016. The genetics of leaf flecking in maize and its relationship to plant defense and disease resistance. Plant Physiology. 172(3):1787-1803.
Genetic architecture of domestication-related traits in maize - (Peer Reviewed Journal)
Xue, S., Bradbury, P., Casstevens, T., Holland, J.B. 2016. Genetic architecture of domestication-related traits in maize. Genetics. 204:99-113.
Genetic characterization of the North Carolina State University maize lines - (Peer Reviewed Journal)
Nelson, P.T., Krakowsky, M.D., Coles, N.D., Holland, J.B., Bubeck, D.M., Smith, J.C., Goodman, M.M. 2016. Genetic characterization of the North Carolina State University maize lines. Crop Science. 56:259-275.
Responses to recurrent index selection for reduced fusarium ear rot and lodging and for increased yield in maize - (Peer Reviewed Journal)
Horne, D., Eller, M., Holland, J.B. 2015. Responses to recurrent index selection for reduced fusarium ear rot and lodging and for increased yield in maize. Crop Science. 56:85-94.
Ensemble learning of QTL models improves prediction of complex traits - (Peer Reviewed Journal)
Bian, Y., Holland, J.B. 2015. Ensemble learning of QTL models improves prediction of complex traits. G3, Genes/Genomes/Genetics. 5:2073-2084.
MAGIC Maize: A new resource for plant genetics - (Review Article)
Holland, J.B. 2015. MAGIC Maize: A new resource for plant genetics. Genome Biology. 16:163.
New insight into a complex plant-fungal pathogen interaction - (Review Article)
Balint Kurti, P.J., Holland, J.B. 2015. New insight into a complex plant-fungal pathogen interaction. Nature Genetics. 47:101-103.
Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel - (Peer Reviewed Journal)
Samayoa, L.F., Malvar, R., Olukolu, B., Holland, J.B., Butron, A. 2015. Genome-wide association study reveals a set of genes associated with resistance to the Mediterranean corn borer (Sesamia nonagrioides L.) in a maize diversity panel. Biomed Central (BMC) Plant Biology. 15:35.
Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection - (Peer Reviewed Journal)
Zila, C., Ogut, F., Romay, M.C., Gardner, C.A., Buckler IV, E.S., Holland, J.B. 2014. Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection. Biomed Central (BMC) Plant Biology. 14:372.
Registration of the Ki14 × B73 recombinant inbred mapping population of maize - (Peer Reviewed Journal)
Pratt, R., Holland, J.B., Balint Kurti, P.J., Coles, N., Zwonitzer, J., Casey, M., Mcmullen, M.D. 2015. Registration of the Ki14 × B73 recombinant inbred mapping population of maize. Journal of Plant Registrations. 9(2):262-265.
Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population - (Peer Reviewed Journal)
Ogut, F., Bradbury, P., Holland, J.B., Bian, Y. 2015. Joint-multiple family linkage analysis predicts within-family variation better than single-family analysis of the maize nested association mapping population. Heredity. 114(4):552-563.
Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population - (Peer Reviewed Journal)
Bian, Y., Yang, Q., Balint Kurti, P.J., Wisser, R., Holland, J.B. 2014. Limits on the reproducibility of marker associations with southern leaf blight resistance in the maize nested association mapping population. Biomed Central (BMC) Genomics. 15:1068.
QTL mapping using high-throughput sequencing - (Book / Chapter)
Jamann, T., Balint Kurti, P.J., Holland, J.B. 2015. QTL mapping using high-throughput sequencing. In: Alonso, J., Stepanova, A.N., editors. Methods in Molecular Biology: Plant Functional Genomics: Methods and Protocols. New York, NY: Springer. p. 257-285.
Hallauer’s Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize Reprint Icon - (Peer Reviewed Journal)
Teixeira, J.E., Weldekidan, T., de Leon, N., Flint Garcia, S.A., Holland, J.B., Lauter, N.C., Murray, S.C., Xu, W., Hessel, D., Kleintop, A.E., Hawk, J., Hallauer, A.R., Wisser, R. 2015. Hallauer’s Tusón: a decade of selection for tropical-to-temperate phenological adaptation in maize. Heredity. 114:229-240.
Insights into the effects of long-term artificial selection on seed size in maize Reprint Icon - (Peer Reviewed Journal)
Hirsch, C.N., Flint Garcia, S.A., Beissinger, T.M., Eichten, S.R., Deshpande, S., Barry, K., Mcmullen, M.D., Holland, J.B., Buckler IV, E.S., Springer, N., Buell, R.C., de Leon, N., Kaeppler, S.M. 2014. Insights into the effects of long-term artificial selection on seed size in maize. Genetics. 198(1):409-421.
Charles W. Stuber: Maize geneticist and pioneer of marker-assisted selection - (Peer Reviewed Journal)
Holland, J.B., Murphy, P., Graham, G., Senior, L. 2015. Charles W. Stuber: Maize geneticist and pioneer of marker-assisted selection. Plant Breeding Reviews. 39:1-22.
A genome-wide association study of the maize hypersensitive defense response identifies genes that cluster in related pathways - (Peer Reviewed Journal)
Olukolu, B., Wang, G., Vontimitta, V., Venkata, B.P., Marla, S., Ji, J., Gachomo, E., Chu, K., Negeri, A., Benson, J., Nelson, R., Bradbury, P., Nielsen, D., Holland, J.B., Balint Kurti, P.J., Johal, G. 2014. A genome-wide association study of the maize hypersensitive defense response identifies genes that cluster in related pathways. PLoS Genetics. 10(8): e1004562. doi: 10.1371/journal.pgen.1004562.
Breeding and genetic diversity - (Book / Chapter)
Goodman, M.M., Holland, J.B., Sanchez-Gonzalez, J. 2014. Breeding and genetic diversity. In: R. Wusirika, M. Bohn, J. Lai, and C. Cole (Eds.). Genetics, Genomics and Breeding of Maize. CRC Press, Boca Raton, FL. p. 14–50
The genetic architecture of maize height Reprint Icon - (Peer Reviewed Journal)
Peiffer, J.A., Romay, M.C., Gore, M.A., Flint Garcia, S.A., Zhang, Z., Millard, M.J., Gardner, C.A., McMullen, M.D., Holland, J.B., Bradbury, P., Buckler IV, E.S. 2014. The genetic architecture of maize height. Genetics. 196:1337-1356.
Yield effecgs of two southern leaf blight resistance loci in maize hybrids - (Peer Reviewed Journal)
Santa-Cruz, J.H., Kump, K.L., Arellano, C., Goodman, M., Krakowsky, M.D., Holland, J.B., Balint Kurti, P.J. 2014. Yield effecgs of two southern leaf blight resistance loci in maize hybrids. Crop Science. 54(3):882-894.
Breeding Plants: Modern - (Book / Chapter)
Holland, J.B. 2014. Breeding Plants: Modern. In: Neal Van Alfen, editor-in-chief. Encyclopedia of Agriculture and Food Systems, Vol. 2, San Diego: Elsevier; 2014. pp p. 187-200.
A genome-wide association study reveals genes associated with fusarium ear rot resistance in a maize core diversity panel - (Peer Reviewed Journal)
Zila, C., Samayoa, F.L., Santiago, R., Butron, A., Holland, J.B. 2013. A genome-wide association study reveals genes associated with fusarium ear rot resistance in a maize core diversity panel. Genes, Genomes, Genetics. 3:2095-2104.
Comprehensive genotyping of the USA national maize inbred seed bank - (Peer Reviewed Journal)
Romay, M.C., Millard, M.J., Glaubitz, J.C., Peiffer, J.A., Swarts, K.L., Casstevens, T.M., Elshire, R.J., Acharya, C.B., Mitchell, S.E., Flint Garcia, S.A., McMullen, M.D., Holland, J.B., Buckler IV, E.S., Gardner, C.A. 2013. Comprehensive genotyping of the US national maize inbred seed bank. Genome Biology. 14(6):1-18.
Confirming QTL for aflatoxin resistance from Mp313E in different genetic backgrounds - (Peer Reviewed Journal)
Willcox, M., Davis, G., Warburton, M.L., Windham, G.L., Abbas, H.K., Betran, J., Holland, J.B., Williams, W.P. 2013. Confirming quantitative trait loci for aflatoxin resistance from Mp313E in different genetic backgrounds. Molecular Breeding. 32(1):15-26.
A connected set of genes associated with programmed cell death implicated in controlling the hypersensitive response in maize - (Peer Reviewed Journal)
Olukolu, B., Negeri, A., Dhawan, R., Venkata, B.P., Sharma, P., Garg, A., Gachomo, E., Marla, S., Chu, K., Hasan, A., Ji, J., Chintamanani, S., Green, J., Holland, J.B., Wisser, R., Shyu, C., Johal, G., Balint Kurti, P.J. 2013. A connected set of genes associated with programmed cell death implicated in controlling the hypersensitive response in maize. Genetics. 193:609-620.
Quantitative trait loci affecting oil content, oil composition, and other agronomically important traits in Oat (Avena sativa L.) - (Peer Reviewed Journal)
Hizbai, B., Gardner, K., Wight, C., Danda, R., Molnar, S., Johnson, D., Fregeau-Reid, J., Yan, W., Rossnagel, B., Holland, J.B., Tinker, N. 2012. Quantitative trait loci affecting oil content, oil composition, and other agronomically important traits in Oat (Avena sativa L.). The Plant Genome. 5:164-175.
Multivariate mixed linear model analysis of longitudinal data: an information-rich statistical technique for analyzing disease resistance data - (Peer Reviewed Journal)
Veturi, Y., Kump, K., Walsh, E., Ott, O., Poland, J.A., Kolkman, J., Nelson, R., Balint Kurti, P.J., Holland, J.B., Wisser, R. 2012. Multivariate mixed linear model analysis of longitudinal data: an information-rich statistical technique for analyzing disease resistance data. Phytopathology. 102(11):1017-1025.
Mining natural variation for maize improvement: Selection on phenotypes and genes - (Book / Chapter)
Sood, S., Flint Garcia, S.A., Willcox, M., Holland, J.B. 2014. Mining natural variation for maize improvement: Selection on phenotypes and genes. In: R. Tuberosa et al. (eds.), Genomics of Plant Genetic Resources. p. 615 – 649.
Using High-Throughput Genotyping Information for Management of a Large Maize Collection - (Abstract Only)
Gardner, C.A., Romay-Alvarez, M.C., Millard, M.J., Flint Garcia, S.A., Holland, J.B., Buckler Iv, E.S. 2012. Using High-Throughput Genotyping Information for Management of a Large Maize Collection. Agronomy Society of America, Crop Science Society of America, Soil Science Society of America Meeting. Abstract 375-3.
Diallel analysis of resistance to fusarium ear rot and fumonisin contamination in maize - (Peer Reviewed Journal)
Hung, H.Y., Holland, J.B. 2012. Diallel analysis of resistance to fusarium ear rot and fumonisin contamination in maize. Crop Science. 52:2173-2181.
ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize - (Peer Reviewed Journal)
Hung, H., Shannon, L.M., Tian, F., Bradbury, P., Chen, C., Flint Garcia, S.A., McMullen, M.D., Ware, D., Buckler IV, E.S., Doebley, J.F., Holland, J.B. 2012. ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize. Proceedings of the National Academy of Sciences. 109:E1913–E1921.
Genomic localization of the maize cross-incompatibility gene, Gametophyte factor 1 (ga1) - (Peer Reviewed Journal)
Bloom, J.C., Holland, J.B. 2012. Genomic localization of the maize cross-incompatibility gene, Gametophyte factor 1 (ga1). Maydica. 56:1782.
Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels - (Peer Reviewed Journal)
Cook, J.P., McMullen, M.D., Holland, J.B., Tian, F., Bradbury, P., Ross-Ibarra, J., Buckler IV, E.S., Flint-Garcia, S.A. 2012. Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels. Plant Physiology. 158:824-834.
Distinct genetic architectures for male and female inflorescence traits of maize - (Peer Reviewed Journal)
Brown, P.J., Upadyayula, N., Mahone, G.S., Tian, F., Bradbury, P., Myles, S., Holland, J.B., Flint Garcia, S.A., McMullen, M.D., Buckler IV, E.S., Rocheford, T.R. 2011. Distinct genetic architectures for male and female inflorescence traits of maize. PLoS Genetics. 7(11):e1002383.
The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population - (Peer Reviewed Journal)
Hung, H., Browne, C.J., Guill, K.E., Coles, N., Eller, M., Garcia, A., Lepak, N.K., Melia-Hancock, S., Oropeza-Rosas, M., Salvo, S., Upadyayula, N., Buckler IV, E.S., Flint Garcia, S.A., Mcmullen, M.D., Rocheford, T., Holland, J.B. 2012. The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population. Heredity. 108:490-499.
QTL controlling masculinization of ear tips in a maize (Zea mays L.) intraspecific cross - (Peer Reviewed Journal)
Holland, J.B., Coles, N.D. 2011. QTL controlling masculinization of ear tips in a maize (Zea mays L.) intraspecific cross. Genes, Genomes, and Genomics. 1:337-341.
Three New Teosintes (Zea spp., Poaceae) From Mexico - (Peer Reviewed Journal)
Sanchez-Gonzales, J.J., De La Cruz, L., Vidal, V.A., Parra, R.J., Taba, S., Santacruz, F., Sood, S., Holland, J.B., Ruiz, J.A., Carvajal, S., Aragon, F., Chavez, V.H., Morales, M.M., Barba, R. 2011. Three New Teosintes (Zea spp., Poaceae) From Mexico. American Journal of Botany. 98:1537-1548.
Seed dormancy in Mexican teosinte - (Peer Reviewed Journal)
Avendano-Lopez, A., Sanchez-Gonzales, J., Ruiz-Corral, J., De La Cruz-Larios, L., Santacruz-Rubalcava, F., Sanchez Hernandez, C., Holland, J.B. 2011. Seed dormancy in Mexican teosinte. Crop Science. 51:2056-2066.
Multivariate analysis of maize disease resistances suggests a pleiotropic genetic basis and implicates a glutathione S-transferase gene - (Peer Reviewed Journal)
Wisser, R., Kolkman, J., Patzoldt, M., Holland, J.B., Jianming, Y., Krakowsky, M.D., Nelson, R., Balint Kurti, P.J. 2011. Multivariate analysis of maize disease resistances suggests a pleiotropic genetic basis and implicates a glutathione S-transferase gene. Proceedings of the National Academy of Sciences. 108:7339-7344.
Comparison of Conventional, Modified Single Seed Descent, and Doubled Haploid Breeding Methods for Maize Inbred Line Development Using GEM Breeding Crosses - (Peer Reviewed Journal)
Jumbo, M., Weldekidan, T., Holland, J.B., Hawk, J. 2011. Comparison of Conventional, Modified Single Seed Descent, and Doubled Haploid Breeding Methods for Maize Inbred Line Development Using GEM Breeding Crosses. Crop Science. 51:1534-1543.
Mapping QTL controlling southern leaf blight resistance by joint analysis of three related recombinant inbred line populations - (Peer Reviewed Journal)
Nageri, A., Coles, N., Holland, J.B., Balint Kurti, P.J. 2011. Mapping QTL controlling southern leaf blight resistance by joint analysis of three related recombinant inbred line populations. Crop Science. 51(4):1571-1579.
Allelic effect variation at key photoperiod response quantitative trail loci in maize - (Peer Reviewed Journal)
Coles, N., Zila, C., Holland, J.B. 2011. Allelic effect variation at key photoperiod response quantitative trail loci in maize. Crop Science. 51(3):1036-1049.
Genome-wide association study of maize identifies genes affecting leaf architecture - (Peer Reviewed Journal)
Tian, F., Bradbury, P., Brown, P., Sun, Q., Flint Garcia, S.A., Rocheford, T.R., McMullen, M.D., Holland, J.B., Buckler IV, E.S. 2011. Genome-wide association study of maize identifies genes affecting leaf architecture. Nature Genetics. 43:159-162.
Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population - (Peer Reviewed Journal)
Kump, K., Bradbury, P., Buckler IV, E.S., Belcher, A., Oropeza-Rosas, M., Wisser, R., Zwonitzer, J., Kresovich, S., McMullen, M.D., Ware, D., Balint Kurti, P.J., Holland, J.B. 2011. Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population. Nature Genetics. 43:163-168.
Joint Analysis of Near Isogenic and Recombinant Inbred Line Populations Yields Precise Positional Estimates for QTL - (Peer Reviewed Journal)
Kump, K.L., Holland, J.B., Jung, M.T., Wolters, P., Balint Kurti, P.J. 2010. Joint Analysis of Near Isogenic and Recombinant Inbred Line Populations Yields Precise Positional Estimates for QTL. The Plant Genome. 3:142-153.
A novel genetic framework for studying response to artificial selection - (Peer Reviewed Journal)
Wisser, R., Balint Kurti, P.J., Holland, J.B. 2011. A novel genetic framework for studying response to artificial selection. Plant Genetic Resources. 9:281-283.
Response-Additional Implications of Perennial Bioenergy Crops: Hydrology and Climate - (Research Notes)
Glover, J.D., Reganold, J.P., Bell, L.W., Borevitz, J., Brummer, E.C., Buckler Iv, E.S., Cox, C.M., Cox, T.S., Crews, T.E., Culman, S.W., Dehann, L.R., Eriksson, D., Gill, B.S., Holland, J.B., Hu, F., Hulke, B.S., Ibrahim, A., Jackson, W., Jones, S.S., Murray, S.C., Paterson, A.H., Ploschuk, E., Sacks, E.J., Snapp, S., Tao, D., Van Tassel, D.L., Wade, L.J., Wyse, D.L., Xu, Y. 2010. Perennial questions of hydrology and climate - response. Science. 330:33-34.
Increasing food and ecosystem security through perennial grains - (Peer Reviewed Journal)
Glover, J.D., Reganold, J.P., Bell, L.W., Borevitz, J., Brummer, E.C., Buckler Iv, E.S., Cox, C.M., Cox, T., Crews, T.E., Culman, S.W., Dehann, L.R., Eriksson, D., Gill, B., Holland, J.B., Hu, F.Y., Hulke, B.S., Ibrahim, A., Jackson, W., Jones, S., Murray, S., Paterson, A.H., Ploschuk, E., Sacks, E.J., Snapp, S., Tao, D.Y., Van Tassel, D., Wade, L., Wyse, D., Xu, Y. 2010. Increasing food and ecosystem security through perennial grains. Science. 328:1638-1639.
Selection for Reduced Fusarium Ear Rot and Fumonisin Content in Advanced Backcross Maize Lines and Their Topcross Hybrids - (Peer Reviewed Journal)
Eller, M.S., Payne, G.A., Holland, J.B. 2010. Selection for Reduced Fusarium Ear Rot and Fumonisin Content in Advanced Backcross Maize Lines and Their Topcross Hybrids. Crop Science. 50:2249-2260.
Genetic Control of Photoperiod Sensitivity in Maize Revealed by Joint Multiple Population Analysis - (Peer Reviewed Journal)
Coles, N.D., McMullen, M.D., Balint Kurti, P.J., Pratt, R.C., Holland, J.B. 2010. Genetic Control of Photoperiod Sensitivity in Maize. Genetics. 184:799-812.
Mapping resistance quantitative trail loci for three foliar diseases in a maize recombinant inbred line population-evidence for multiple disease resistance? - (Peer Reviewed Journal)
Zwonitzer, J., Coles, N., Krakowsky, M.D., Holland, J.B., Mcmullen, M.D., Pratt, R., Balint Kurti, P.J. 2010. Mapping resistance quantitative trail loci for three foliar diseases in a maize recombinant inbred line population-evidence for multiple disease resistance?. Journal of Phytopathology. 100:72-79.
A HERITABILITY-ADJUSTED GGE BIPLOT FOR TEST ENVIRONMENT EVALUATION - (Peer Reviewed Journal)
Yan, W., Holland, J.B. 2010. A HERITABILITY-ADJUSTED GGE BIPLOT FOR TEST ENVIRONMENT EVALUATION. Euphytica. 171(3):355-369.
Direct Mapping Of Density Response in Recombinant Inbred Lines of Maize (Zea mays L.) - (Peer Reviewed Journal)
Gonzalo, M., Holland, J.B., Vyn, T., Mcintyre, L. 2010. Direct Mapping Of Density Response in Recombinant Inbred Lines of Maize (Zea mays L.). Heredity. 104:583-599
Genetic Properties of the Maize Nested Association Mapping Population - (Peer Reviewed Journal)
Mcmullen, M.D., Kresovich, S., Sanchez-Villeda, H., Bradbury, P., Li, H., Sun, Q., Flint Garcia, S.A., Thornsberry, J., Acharya, C., Bottoms, C., Brown, P., Browne, C.J., Eller, M.S., Guill, K.E., Harjes, C., Kroon, D., Lepak, N.K., Mitchell, S., Peterson, B.E., Pressoir, G., Romero, S.M., Oropeza Rosas, M., Salvo, S.A., Yates, H., Hanson, M., Jones, E., Smith, S., Glaubitz, J., Goodman, M., Ware, D., Holland, J.B., Buckler Iv, E.S. 2009. Genetic Properties of the Maize Nested Association Mapping Population. Science. 325:737-740.
The Genetic Architecture of Maize Flowering Time - (Peer Reviewed Journal)
Buckler Iv, E.S., Holland, J.B., Mcmullen, M.D., Kresovich, S., Acharya, C., Bradbury, P., Brown, P., Browne, C.J., Eller, M.S., Ersoz, E., Flint Garcia, S.A., Garcia, A., Glaubitz, J.C., Goodman, M., Haries, C., Guill, K.E., Kroon, D., Larsson, S., Lepak, N.K., Li, H., Mitchell, S.E., Pressoir, G., Peiffer, J., Oropeza Rosas, M., Rocheford, T., Romay, C., Romero, S., Salvo, S.A., Sanchez Villeda, H., Sun, Q., Tian, F., Upadyayula, N., Ware, D., Yates, H., Yu, J., Zhang, Z. 2009. The Genetic Architecture of Maize Flowering Time. Science. 325(5941):714-718.
Quantitative Trait Loci and Epistasis for Oat Winter Hardiness Component Traits - (Peer Reviewed Journal)
Wooten, D.R., Livingston, D.P., Lyerly, H.J., Holland, J.B., Jellen, E.N., Marshall, D.S., Murphy, J. 2009. Quantitative Trait Loci and Epistasis for Oat Winter Hardiness Component Traits. Crop Science. 48:149-157.
Grain Yield and Fusarium Ear Rot of Maize Hybrids Developed From Lines With Varying Levels of Resistance - (Peer Reviewed Journal)
Eller, M.S., Robertson-Hoyt, L., Payne, G., Holland, J.B. 2009. Grain Yield and Fusarium Ear Rot of Maize Hybrids Developed From Lines With Varying Levels of Resistance. Maydica. 53:231-237.
Dedication: Major M. Goodman, Maize Breeder and Geneticist - (Review Article)
Holland, J.B., Nelson, P. 2010. Dedication: Major M. Goodman, Maize Breeder and Geneticist. Plant Breeding Reviews. 33:1-29
Breeding for Improved Resistance to Fumonisin Contamination in Maize - (Peer Reviewed Journal)
Eller, M.S., Payne, G., Holland, J.B. 2008. Breeding for Improved Resistance to Fumonisin Contamination in Maize. Toxin Review. 27:371-389.
Harnessing quantitative genetics and genomics for understanding and improving complex traits in crops - (Proceedings)
Holland, J.B., Cardinal, A.J. 2008. Harnessing quantitative genetics and genomics for understanding and improving complex traits in crops. Drought Frontier Project Planning Workshop. p:123-136.
A COMPARISON OF LEAF APPEARANCE RATES AMONG TEOSINTE, MAIZE LANDRACES AND MODERN MAIZE - (Peer Reviewed Journal)
Van Esbroeck, G., Ruiz, J., Sanchez, J., Holland, J.B. 2008. A COMPARISON OF LEAF APPEARANCE RATES AMONG TEOSINTE, MAIZE LANDRACES AND MODERN MAIZE. Maydica. 53:117-153.
Molecular Characterization of Maize Inbreds with Expired U.S. Plant Variety Protection - (Peer Reviewed Journal)
Nelson, P., Coles, N., Holland, J.B., Bubeck, D., Smith, S., Goodman, M. 2008. Molecular Characterization of Maize Inbreds with Expired U.S. Plant Variety Protection. Crop Science. 48:1673-1685.
Comparison of Conventional, Modified Single Seed Descent, and Double Haploid Breeding Methods for Maize Inbred Line Development Using GEM Breeding Crosses - (Proceedings)
Hawk, J., Jumbo, M., Weldekidan, T., Holland, J.B. 2008. Comparison of Conventional, Modified Single Seed Descent, and Double Haploid Breeding Methods for Maize Inbred Line Development Using GEM Breeding Crosses. Illinois Corn Breeders School Proceedings. 44: 16-25.
Climatic Adaptation and Ecological Descriptors of 42 Mexican Maize (Zea Mays L.) Races - (Peer Reviewed Journal)
Ruiz Corral, J., Duran Puga, N., Sanchez, J., Ron Parra, J., Gonzalez, D., Holland, J.B., Medina, G. 2008. Climatic Adaptation and Ecological Descriptors of 42 Mexican Maize (Zea Mays L.) Races. Crop Science. 48:1502-1512.
Maize Phenomics: Massively Parallel Phenotyping of the Nested Association Mapping Population - (Abstract Only)
GENOME-WIDE COMPLEX TRAIT DISSECTION THROUGH NESTED ASSOCIATION MAPPING - (Peer Reviewed Journal)
Buckler Iv, E.S., Yu, J., Holland, J.B., Mcmullen, M.D. 2008. Genome-wide complex trait dissection through nested association mapping. Genetics. 178:539-551.
Increasing Yield - (Book / Chapter)
Holland, J.B. 2009. Increasing Yield. Maize Handbook. 469-482.
Quantitative Trait Loci and Epistasis for Oat Winter Hardiness Component Traits - (Peer Reviewed Journal)
Wooten, D.R., Livingston, D.P., Lyerly, J., Holland, J.B., Fellon, E.N., Marshall, D.S., Murphy, P.J. 2008. Quantitative Trait Loci and Epistasis for Oat Winter Hardiness Component Traits. Crop Science. 48:149-157.
Quantitative trait loci and epistasis for crown freezing tolerance in the Kanota x Ogle hexaploid oat mapping population. - (Peer Reviewed Journal)
Wooten, D., Livingston, D.P., Holland, J.B., Marshall, D.S., Murphy, J. 2008. Quantitative trait loci and epistasis for crown freezing tolerance in the Kanota x Ogle hexaploid oat mapping population.. Crop Science. 48:149-157.
Relationships of resistance to Furarium ear rot and fumonisin contamination with agronomic performance of maize - (Peer Reviewed Journal)
Holland, J.B., Roberston-Hoyt, L.A., Kleinschmidt, C.E., White, D.G., Payne, G.A., Maragos, C.M. 2007. Relationships of resistance to Furarium ear rot and fumonisin contamination with agronomic performance of maize. Crop Science. 47(5):1770-1778.
Precise mapping of Quantitative Trait Loci for Resistance to Southern Leaf Blight, caused by Cochliobolus heterostrophus race O, using an Advanced Intercross Maize Population. - (Peer Reviewed Journal)
Balint Kurti, P.J., Zwonitzer, J., Wisser, R., Oropeza-Rosas, M., Holland, J.B., Szalma, S., Carson, M.L. 2007. Precise mapping of Quantitative Trait Loci for Resistance to Southern Leaf Blight, caused by Cochliobolus heterostrophus race O, using an Advanced Intercross Maize Population. Genetics. 176:645-657.
MAPPING RECIPROCAL EFFECTS AND INTERACTIONS WITH PLANT DENSITY STRESS IN ZEA MAYS L. - (Peer Reviewed Journal)
Gonzalo, M., Vyn, T.J., Holland, J.B., Mcintyre, L.M. 2007. Mapping reciprocal effects and interactions with plant density stress in zea mays l.. Heredity. 99:14-30.
Panzea: A Database and Resource for Molecular and Functional Diversity in the Maize Genome - (Peer Reviewed Journal)
Zhao, W., Canaran, P., Jurkuta, R., Fulton, T., Glaubitz, J., Buckler Iv, E.S., Doebley, J., Gaut, B., Goodman, M., Holland, J.B., Kresovich, S., Mcmullen, M.D., Stein, L., Ware, D. 2007. Panzea: A Database and Resource for Molecular and Functional Diversity in the Maize Genome. Nucleic Acids Research. 34:D752-D757.
QTL MAPPING WITH NEAR-ISOGENIC LINES IN MAIZE - (Peer Reviewed Journal)
Szalma, S.J., Hostert, B., Ledeaux, J., Stuber, C.W., Holland, J.B. 2007. Qtl mapping with near-isogenic lines in maize. Theoretical and Applied Genetics. 114:1211-1228.
Genetic Architecture of Complex Traits in Plants - (Review Article)
Holland, J.B. 2007. Genetic Architecture of Complex Traits in Plants. Current Opinion in Plant Biology. 10:156-161.
MAPPING RESISTANCE TO SOUTHERN CORN RUST IN A SEMI-TROPICAL RECOMBINANT INBRED TOPCROSS POPULATION. - (Peer Reviewed Journal)
Jines, M.P., Balint Kurti, P.J., Robertson-Hoyt, L.A., Molnar, T., Holland, J.B., Goodman, M.M. 2006. Mapping resistance to southern corn rust in a semi-tropical recombinant inbred topcross population.. Theoretical and Applied Genetics. 114:659-667.
Relationships among resistances to Fusarium and Aspergillus ear rots and contamination by fumonisin and aflatoxin in maize - (Peer Reviewed Journal)
Holland, J.B., Robertson-Hoyt, L., Betran, J., Payne, G., White, D., Isakeit, T., Maragos, C.M., Molnar, T. 2007. Relationships among resistances to Fusarium and Aspergillus ear rots and contamination by fumonisin and aflatoxin in maize. Phytopathology. 97(3):311-317.
GENOTYPIC CORRELATION AND MULTIVARIATE QTL ANALYSES FOR CELL WALL COMPONENTS AND RESISTANCE TO STALK TUNNELING BY THE EUROPEAN CORN BORER IN MAIZE - (Peer Reviewed Journal)
Krakowsky, M.D., Lee, M., Holland, J.B. 2007. Genotypic correlation and multivariate qtl analyses for cell wall components and resistance to stalk tunneling by the european corn borer in maize. Crop Science 47:485-488.
IDENTIFICATION OF QUANTITATIVE TRAIT LOCI FOR RESISTANCE TO SOUTHERN LEAF BLIGHT AND DAYS TO ANTHESIS IN A MAIZE RECOMBINANT INBRED LINE POPULATION - (Peer Reviewed Journal)
Balint Kurti, P.J., Krakowsky, M.D., Robertson, L., Jines, M., Molnar, T., Goodman, M., Holland, J.B. 2006. Identification of quantitative trait loci for resistance to southern leaf blight and days to anthesis in a maize recombinant inbred line population. Phytopathology. 96:1067-1071.
QTL MAPPING FOR FUSARIUM EAR ROT AND FUMONISIN CONTAMINATION RESISTANCE IN TWO POPULATIONS OF MAIZE (ZEA MAYS) - (Peer Reviewed Journal)
Robertson, L., Jines, M., Balint Kurti, P.J., Kleinschmidt, C., White, D., Payne, G., Maragos, C.M., Holland, J.B. 2006. Qtl mapping for fusarium ear rot and fumonisin contamination resistance in two populations of maize (zea mays). Crop Science 46:1734-1743.
IMPROVIING RESISTANCE TO FUMONISIN CONTAMINATION IN MAIZE - (Proceedings)
Starr, M.R., Robertson-Hoyt, L.A., Payne, G.A., Holland, J.B. 2006. Improviing resistance to fumonisin contamination in maize. Illinois Corn Breeders School Proceedings.
MAPPING DENSITY RESPONSE IN MAIZE: A DIRECT APPROACH FOR TESTING GENOTYPE AND TREATMENT INTERACTION - (Peer Reviewed Journal)
Gonzalo, M., Vyn, T., Holland, J.B., Mcintyre, L. 2006. Mapping density response in maize: a direct approach for testing genotype and treatment interaction. Genetics.
RESPONSES TO SELECTION FOR PARTIAL RESISTANCE TO CROWN RUST IN OAT - (Peer Reviewed Journal)
Long, J., Holland, J.B., Munkvold, G., Jannink, J. 2006. Responses to selection for partial resistance to crown rust in oat. Crop Science.
GENETICS AND BREEDING OF HOST RESISTANCE TO FUSARIUM EAR ROT AND FUMONISIN CONTAMINATION - (Abstract Only)
Holland, J.B. 2005. Genetics and breeding of host resistance to fusarium ear rot and fumonisin contamination. Aflatoxin Elimination Workshop Proceedings.
A UNIFIED MIXED-MODEL METHOD FOR ASSOCIATION MAPPING ACCOUNTING FOR MULTIPLE LEVELS OF RELATEDNESS - (Peer Reviewed Journal)
Yu, J., Pressoir, G., Briggs, W., Vroh, B., Yamasaki, M., Doebley, J.F., Mcmullen, M.D., Gaut, B.S., Holland, J.B., Kresovich, S., Buckler Iv, E.S. 2006. A unified mixed-model method for association mapping accounting for multiple levels of relatedness. Nature Genetics. 38:203-208.
ESTIMATING GENOTYPIC CORRELATIONS AND THEIR STANDARD ERRORS USING MULTIVARIATE RESTRICTED MAXIMUM LIKELIHOOD ESTIMATION WITH SAS PROC MIXED - (Peer Reviewed Journal)
Holland, J.B. 2006. Estimating genotypic correlations and their standard errors using multivariate restricted maximum likelihood estimation with sas proc mixed. Crop Science.
RELEASE OF 20 GEM BREEDING FAMILIES ADAPTED FOR THE SOUTHERN US - (Germplasm Release)
Balint Kurti, P.J., Blanco, M.H., Duvick, S.A., Holland, J.B., Clements, M.J., Holley, R., Carson, M.L., Goodman, M.M. 2006. Release of 20 GEM breeding families adapted for the southern US. Crop Science. 46:996-998.
HERITABILITIES AND CORRELATIONS OF FUSARIUM EAR ROT RESISTANCE AND FUMONISIN CONTAMINATION RESISTANCE IN TWO MAIZE POPULATIONS - (Peer Reviewed Journal)
Robertson, L.A., Kleinschmidt, C.E., White, D.G., Payne, G.A., Maragos, C.M., Holland, J.B. 2006. Heritabilities and correlations of Fusarium ear rot resistance and fumonisin contamination resistance in two maize populations. Crop Science. 46:353-361.
DISSECTION OF QUANTITATIVE TRAIT LOCI (QTL) ASSOCIATED WITH GRAY LEAF SPOT RESISTANCE AND MATURITY IN MAIZE - (Abstract Only)
Jines, M., Goodman, M., Holland, J.B., Robertson, L. 2005. Dissection of quantitative trait loci (qtl) associated with gray leaf spot resistance and maturity in maize. Agronomy Abstracts.
BRIDGING MOLECULAR DIVERSITY AND FUNCTIONAL DIVERSITY: COMPLEX TRAITS DISSECTION IN MAIZE - (Abstract Only)
Yu, J., Pressoir, G., Holland, J.B., Kresovich, S., Buckler Iv, E.S. 2005. Bridging molecular diversity and functional diversity: complex traits dissection in maize. Agronomy Abstracts.
MAJOR M. GOODMAN: A LAUDATION - (Peer Reviewed Journal)
Holland, J.B., Bretting, P.K., Bubeck, D.M., Cardinal, A.J., Holley, R.N., Uhr, D.V. 2006. Major m. goodman: a laudation. Maydica.
IDENTIFICATION OF QTL RESPONSIBLE FOR RESISTANCE TO FUSARIUM EAR ROT AND FUMONISIN CONTAMINATION IN MAIZE (ZEA MAYS) - (Abstract Only)
Robertson, L., Jines, M., White, D., Payne, G., Holland, J.B. 2005. Identification of qtl responsible for resistance to fusarium ear rot and fumonisin contamination in maize (zea mays)[abstract]. Maize Genetics Conference.
MOLECULAR AND FUNCTIONAL DIVERSITY IN THE MAIZE GENOME - (Abstract Only)
Briggs, W., Buckler Iv, E.S., Canaran, P., Doebley, J., Fulton, T., Gaut, B., Goodman, M., Holland, J.B., Kresovich, S., Mcmullen, M.D., Stein, L., Ware, D., Wright, S., Zhao, W. 2005. Molecular and functional diversity in the maize genome [abstract]. Maize Genetics Conference. Paper No. 177. p. 126.
DETECTING EPISTASIS THROUGH THE USE OF DOUBLE-INTROGRESSION NEAR-ISOGENIC LINES OF MAIZE - (Abstract Only)
Tarter, J., Holland, J.B. 2005. Detecting epistasis through the use of double-introgression near-isogenic lines of maize. Maize Genetics Conference Abstracts.
MOLECULAR AND FUNCTIONAL DIVERSITY IN THE MAIZE GENOME - (Abstract Only)
Doebley, J., Buckler Iv, E.S., Fulton, T., Gaut, B., Goodman, M., Holland, J.B., Kresovich, S., Mcmullen, M., Stein, L., Ware, D., Zhao, W. 2005. Molecular and functional diversity in the maize genome. Plant and Animal Genome XIII. [Abstracts].
MAPPING WHEN PHENOTYPE MEASUREMENTS ARE NOT WELL BEHAVED: COMPARISON OF RECUSIVE PARITIONING WITH COMPOSITE INTERVAL QTL MAPPING - (Abstract Only)
Stapleton, A., Simmons, S., Robertson, L., Holland, J.B. 2005. Mapping when phenotype measurements are not well behaved: comparison of recusive paritioning with composite interval QTL mapping [abstract]. Maize Genetics Conference.
THEORETICAL AND BIOLOGICAL FOUNDATIONS OF PLANT BREEDING. - (Proceedings)
Holland, J.B. 2006. Theoretical and biological foundations of plant breeding.. Symposium Proceedings.
IMPLEMENTATION OF MOLECULAR MARKERS FOR QUANTITATIVE TRAITS IN A BREEDING PROGRAM - CHALLENGES AND OPPORTUNITIES - (Proceedings)
Holland, J.B. 2004. Implementation of molecular markers for quantitative traits in a breeding program - challenges and opportunities. In: Fischer, T., et al., editors. New directions for a diverse planet: Proceedings for the 4th International Crop Science Congress. September 26-October 1, 2004. Brisbane, Australia.
MARKER ASSISTED BREEDING FOR HOST RESISTANCE TO MYCOTOXIN CONTAMINATION - (Other)
Robertson, L.A., Payne, G.A., Holland, J.B. 2006. Marker assisted breeding for host resistance to mycotoxin contamination. Book Chapter.
GAINS FROM SELECTION DURING THE DEVELOPMENT OF SUPERIOR SEMIEXOTIC INBRED LINES FROM LATIN AMERICAN MAIZE ACCESSIONS - (Peer Reviewed Journal)
Tarter, J.A., Holland, J.B. 2006. Gains from selection during the development of superior semiexotic inbred lines from latin american maize accessions. Maydica.
GENETIC CORRELATIONS AND HERITABILITY OF FUSARIUM EAR ROT RESISTANCE AND FUMONISIN CONTAMINATION RESISTANCE IN TWO MAIZE POPULATIONS. - (Abstract Only)
Robertson, L.A., Kleinschmidt, C.E., White, D.G., Payne, G.A., Holland, J.B. 2004. Genetic correlations and heritability of fusarium ear rot resistance and fumonisin contamination resistance in two maize populations [abstract].American Society of Agronomy.
DETECTING EPISTASIS THROUGH THE USE OF DOUBLE-INTROGRESSION NEAR-ISOGENIC LINES OF MAIZE. - (Abstract Only)
Tarter, J.A., Holland, J.B. 2004. Detecting epistasis through the use of double-introgression near-isogenic lines of maize [abstracts]. Agronomy Abstracts: p.135. Poster No. 195.
RECOVERY OF EXOTIC ALLELES IN SEMIEXOTIC MAIZE INBREDS DERIVED FROM CROSSES BETWEEN LATIN AMERICAN ACCESSIONS AND A TEMPERATE LINE. - (Peer Reviewed Journal)
Tarter, J.A., Goodman, M.M., Holland, J.B. 2004. Recovery of exotic alleles in semiexotic maize inbreds derived from crosses between latin american accessions and a temperate line.. Theoretical and Applied Genetics.
TESTCROSS PERFORMANCE OF SEMIEXOTIC INBRED LINES DERIVED FROM LATIN AMERICAN MAIZE ACCESSIONS. - (Peer Reviewed Journal)
Tarter, J.A., Goodman, M.M., Holland, J.B. 2003. Testcross performance of semiexotic inbred lines derived from latin american maize accessions.. Crop Science.
FREEZE TOLERANCE QTL IN THE KANOTA X OGLE HEXAPLOID OAT MAPPING POPULATION. - (Other)
WOOTEN, D.R., LIVINGSTON, D.P., MURPHY, J., HOLLAND, J.B. FREEZE TOLERANCE QTL IN THE KANOTA X OGLE HEXAPLOID OAT MAPPING POPULATION.. GORDON RESEARCH CONFERENCE PROCEEDINGS. 2003.
COMBINING ABILITY OF TROPICAL MAIZE WITH ISOGENIC BT AND CONVENTIONAL TESTERS. - (Peer Reviewed Journal)
HOLLAND, J.B., GOODMAN, M.M. COMBINING ABILITY OF TROPICAL MAIZE WITH ISOGENIC BT AND CONVENTIONAL TESTERS.. MAYDICA. 2003.
GENOME-WIDE GENETIC DIVERSITY AMONG COMPONENTS DOES NOT CAUSE CULTIVAR BLEND RESPONSE - (Peer Reviewed Journal)
HELLAND, S.J., HOLLAND, J.B. GENOME-WIDE GENETIC DIVERSITY AMONG COMPONENTS DOES NOT CAUSE CULTIVAR BLEND RESPONSES. CROP SCIENCE.
INCORPORATION OF EXOTIC GERMPLASM. - (Peer Reviewed Journal)
HOLLAND, J.B. INCORPORATION OF EXOTIC GERMPLASM. ENCYCLOPEDIA OF PLANT & CROP SCIENCE. 2004.
MAIZE MAPPING POPULATIONS FOR IDENTIFYING QTLS FOR FUMONSIN ACCUMULATION AND EAR ROT RESISTANCE. - (Proceedings)
ROBERTSON, L.A., PAYNE, G.A., WHITE, D.G., HOLLAND, J.B. MAIZE MAPPING POPULATIONS FOR IDENTIFYING QTLS FOR FUMONSIN ACCUMULATION AND EAR ROT RESISTANCE.. AFLATOXIN ELIMINATION WORKSHOP PROCEEDINGS. 2002.
ESTIMATING AND INTERPRETING HERITABILITY FOR PLANT BREEDING: AN UPDATE. - (Peer Reviewed Journal)
Holland, J.B., Cervantes-Martinez, C.T. 2003. Estimating and interpreting heritability for plant breeding.. Plant Breeding Reviews. Vol. 22, p. 9-112.
STRATEGIES FOR THE DEVELOPMENT AND IMPLEMENTATION OF MOLECULAR MARKERS IN PLANT BREEDING PROGRAMS. - (Proceedings)
ECKSTEIN, P.E., SCOLES, G.J., HOLLAND, J.B., MCELORY, A.R. STRATEGIES FOR THE DEVELOPMENT AND IMPLEMENTATION OF MOLECULAR MARKERS IN PLANT BREEDING PROGRAMS.. AMERICAN OAT WORKERS CONFERENCE PROCEEDINGS. 2002.
BREEDING PERENNIAL GRAIN CROPS. - (Peer Reviewed Journal)
QTL MAPPING USING NEAR-ISOGENIC LINES. - (Abstract Only)
CORRELATED RESPONSES TO SELECTION FOR GREATER B-GLUCAN CONTENT IN TWO OAT POPULATIONS. - (Peer Reviewed Journal)
GENOTYPIC AND PHENOTYPIC EVALUATION OF INBRED LINES DERIVED FROM LATIN AMERICAN MAIZE ACCESSIONS. - (Abstract Only)
GENETICS OF VERNALIZATION AND PHOTOPERIOD RESPONSES IN OAT. - (Peer Reviewed Journal)
POLYMORPHISM OF PCR-BASED MARKERS TARGETING EXON, INTRON, PROMOTER, AND SSRGENE REGIONS IN MAIZE AND INTRONS AND REPEAT SEQUENCES IN OAT. - (Peer Reviewed Journal)
UPDATE OF QTL INFERENCES FOR THE OAT CROSS 'OGLE' /'TAM 0-301' - (Abstract Only)
GENETIC RELATIONSHIPS OF CROWN RUST RESISTANCE, GRAIN YIELD, TEST WEIGHT AND SEED WEIGHT IN OAT. - (Peer Reviewed Journal)
A LINKAGE MAP OF HEXAPLOID OAT BASED ON GRASS ANCHOR DNA CLONES AND ITS RELATIONSHIP TO OTHER OAT MAPS. - (Peer Reviewed Journal)
SLECTION FOR GREATER B-GLUCAN CONTENT IN OAT GRAIN. - (Peer Reviewed Journal)
CORRELATED RESPONSE OF FATTY ACID COMPOSITION TO NINE CYCLES OF RECURRENT SELECTION FOR INCREASED OIL CONTENT IN OAT - (Peer Reviewed Journal)
CORRELATED RESPONSES OF GRAIN QUALITY AND AGRONOMIC TRAITS TO NINE CYCLES OF RECURRENT SELECTION FOR HIGHER OIL CONTENT IN OAT. - (Peer Reviewed Journal)
CORRELATED RESPONSES OF FATTY ACID COMPOSITION, GRAIN QUALITY, AND AGRONOMIC TRAITS TO NINE CYCLES OF RECURRENT SELECTION FOR INCREASED OIL CONTENT IN OAT. - (Peer Reviewed Journal)
ENHANCING DISEASE RESISTANCE OF CROPS THROUGH BREEDING AND GENETICS. - (Peer Reviewed Journal)
EPISTASIS, GENE INTERACTIONS, AND PLANT BREEDING. - (Book / Chapter)
QTL ANALYSIS AND GENETIC MAP UPDATE FOR THE OAT CROSS 'OGLE' X 'TAM O-301' - (Proceedings)
AN RFLP-BASED LINKAGE MAP OF DIPLOID AVENA RECOMBINANT INBRED LINE POPULATION - (Peer Reviewed Journal)
RECURRENT SELECTION IN OAT FOR ADAPTATION TO DIVERSE ENVIRONMENTS - (Peer Reviewed Journal)
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