Research Project: Conservation and Utilization of Temperate-Adapted Fruit, Nut, and Other Specialty Crop Genetic Resources

Location: National Clonal Germplasm Repository

Publications (Clicking on the reprint icon will take you to the publication reprint.)

Enabling a deeper dive into large scale analyses through collaboration between the Corvallis genebank and GDR/GDV/Breeding Insight - (Abstract Only)

Characterizing the growth, morphology, productivity, and fruit quality of twenty-five strawberry cultivars in an indoor vertical farm environment - (Peer Reviewed Journal)

Willingness to pay for blueberries: Sensory attributes, fruit quality traits, and consumers’ characteristics - (Peer Reviewed Journal)
Canales, E., Gallardo, R., Iorizzo, M., Munoz, P., Ferrao, L., Luby, C., Bassil, N.V., Pottorff, M., Perkins-Veazie, P., Sandefur, P., Colonna, A., Sims, C. 2024. Willingness to pay for blueberries: Sensory attributes, fruit quality traits, and consumers’ characteristics. HortTechnology. Volume 59: Issue 8. https://doi.org/10.21273/HORTSCI17947-24.

Crop wild relatives of temperate fruits at the Corvallis genebank: uses and prospects - (Abstract Only)
Bassil, N.V., Hardigan, M.A., Scagel, C.F. 2024. Crop wild relatives of temperate fruits at the Corvallis genebank: uses and prospects. Proceedings American Society of Horticultural Sciences.

How to efficiently query germplasm observations - (Abstract Only)
Bassil, N.V., Bushakra, J. 2024. How to efficiently query germplasm observations. Proceedings American Society of Horticultural Sciences.

Genomic characterization of cultivated and wild fragaria species to inform germplasm conservation and breeding practices - (Abstract Only)
Sandercock, A., Sapkota, M., Chen, S., Lin, M., Beil, C.T., Zhao, D., King, R., Sheehan, M.J., Hardigan, M.A., Bassil, N.V. 2024. Genomic characterization of cultivated and wild fragaria species to inform germplasm conservation and breeding practices. American Society of Horticulture Science Meeting.

Genome database for vaccinium: A community resource for genetics, genomics, and breeding research - (Abstract Only)
Humann, J., Cheng, C., Lee, T., Buble, K., Zheng, P., Jung, S., Yu, J., Gasic, K., Ru, S., Bassil, N.V., Iorizzo, M., Main, D. 2024. Genome database for vaccinium: A community resource for genetics, genomics, and breeding research. International Vaccinium Symposium.

Overview of single nucleotide polymorphism markers in blueberry and their uses - (Abstract Only)
Bassil, N.V., Zhao, D., Munoz, P., Sheehan, M., Iorizzo, M. 2024. Overview of single nucleotide polymorphism markers in blueberry and their uses. International Vaccinium Symposium.

Developing climate scenarios for maintenance of clonal germplasm of blueberries, cranberries, lingonberries, huckleberries, and their crop wild relatives - (Abstract Only)
Bassil, N.V., Oliphant, J.M. 2024. Developing climate scenarios for maintenance of clonal germplasm of blueberries, cranberries, lingonberries, huckleberries, and their crop wild relatives. International Vaccinium Symposium.

Confirming identity of blueberry cultivars with a microsatellite marker-based fingerprinting set - (Abstract Only)
Yalcin, O., King, R., Oliphant, J.M., Bassil, N.V. 2024. Confirming identity of blueberry cultivars with a microsatellite marker-based fingerprinting set. International Vaccinium Symposium.

Breeding new cultivars for climate adaptation - (Trade Journal)
Contreras, R., Nackley, L., Scagel, C.F. 2024. Breeding new cultivars for climate adaptation. Digger. July 2024:33-37.

Assessing predictability of post-storage texture and appearance characteristics in blueberry at breeding population level - (Peer Reviewed Journal)
Mengist, M.F., Pottorff, M., Mackey, T.A., Ferrao, F., Casorzo, G., Lila, M., Luby, C., Giongo, L., Perkins-Veazie, P., Bassil, N.V., Munoz, P., Iorizzo, M. 2024. Assessing predictability of post-storage texture and appearance characteristics in blueberry at breeding population level. Postharvest Biology and Technology. 214. Article 112964. https://doi.org/10.1016/j.postharvbio.2024.112964.

A public mid-density genotyping platform for cultivated blueberry - (Peer Reviewed Journal)
Zhao, D., Sapkota, M., Glaubitz, J., Bassil, N.V., Mengist, M., Iorizzo, M., Heller-Uszynska, K., Mollinari, M., Beil, C., Sheehan, M. 2024. A public mid-density genotyping platform for cultivated blueberry. Genetic Resources and Crop Evolution. 5(9):36-44. https://doi.org/10.46265/genresj.WQZS1824.

Updates on curation and standardization of phenotypic and genotypic data for horticultural databases - (Abstract Only)
Bushakra, J., Jung, S., Bassil, N.V., Cheng, C., Lee, T., Yu, J., Humann, J.L., Buble, K., Zheng, P., Main, D. 2024. Updates on curation and standardization of phenotypic and genotypic data for horticultural databases. American Society of Horticulture Science Meeting.

Investigating the benefits of tectonite dust as an amendment for bark substrates and dryland crops - (Peer Reviewed Journal)
Nackley, L., Van Lehman, L., Van Lehman, O., Owen Jr., J.S., Scagel, C.F. 2024. Investigating the benefits of tectonite dust as an amendment for bark substrates and dryland crops. Plants. 13(1). Article 126. https://doi.org/10.3390/plants13010126.

Development of a targeted genotyping platform for reproducible results within tetraploid and hexaploid blueberry - (Peer Reviewed Journal)
Clare, S.J., Driskill, M., Millar, T.R., Chagne, D., Montanari, S., Thomson, S., Espley, R.V., Munoz, P., Benevenuto, J., Zhao, D., Sheehan, M., Mengist, M.F., Rowland, L.J., Ashrafi, H., Melmaiee, K., Kulkarni, K.P., Babiker, E.M., Main, D., Olmstead, J.W., Gilbert, J.L., Havlak, P., Hung, H., Kniskern, J., Percival, D., Edger, P., Iorizzo, M., Bassil, N.V. 2024. Development of a targeted genotyping platform for reproducible results within tetraploid and hexaploid blueberry. Frontiers in Horticulture. 2. Article 1339310. https://doi.org/10.3389/fhort.2023.1339310.

A black raspberry fingerprinting set identifies seedlings in two families - (Peer Reviewed Journal)
Bassil, N.V., King, R., Peterson, M.E., Dossett, M., Hardigan, M.A. 2024. A black raspberry fingerprinting set identifies seedlings in two families. Acta Horticulturae. 1388:115-120. https://doi.org/10.17660/ActaHortic.2024.1388.16.

Developing a single sequence repeat (SSR) fingerprinting set to characterize the NCGR Ribes Collection - (Peer Reviewed Journal)
Bushakra, J., Alvarez, A., King, R., Green, J., Nyberg, A.M., Bassil, N.V. 2024. Developing a single sequence repeat (SSR) fingerprinting set to characterize the NCGR Ribes Collection. Acta Horticulturae. 1388:107-114. https://doi.org/10.17660/ActaHortic.2024.1388.15.

Developing a new crop ontology for blueberry - (Abstract Only)
Bassil, N.V., Hislop, L., Hulse-Kemp, A.M., Zhang, D., Sheehan, M., Humann, J., Main, D., Iorizzo, M., Babiker, E.M. 2024. Developing a new crop ontology for blueberry. Plant and Animal Genome Conference.

Blueberry and cranberry pangenomes as a resource for future genetic studies and breeding efforts - (Peer Reviewed Journal)
Yocca, A., Platts, A., Alger, E., Teresi, S., Mengist, M., Benevenuto, J., Ferrao, L., Jacobs, M., Babinski, M., Magallanes-Lundback, M., Bayer, P., Golicz, A., Humann, J., Main, D., Espley, R., Chagne, D., Albert, N., Montanari, S., Vorsa, N., Polashock, J.J., Diaz-Garcia, L., Zalapa, J.E., Bassil, N.V., Munoz, P., Iorizzo, M., Edger, P. 2023. Blueberry and cranberry pangenomes as a resource for future genetic studies and breeding efforts. Horticulture Research. 10(11). Article uhad202. https://doi.org/10.1093/hr/uhad202.

Influence of organic plant breeding on the rhizosphere microbiome of common bean (Phaseolus vulgaris L.) - (Peer Reviewed Journal)
Park, H.E., Nebert, L., King, R., Busby, P., Myers, J.R. 2023. Influence of organic plant breeding on the rhizosphere microbiome of common bean (Phaseolus vulgaris L.). Frontiers in Plant Science. 14. Article 1251919. https://doi.org/10.3389/fpls.2023.1251919.

Development of a 70k multispecies array for grape, black walnut, chestnut, and hazelnut - (Abstract Only)

Resources for genomics, genetics and breeding research in GDR, the Genome Database for Rubus - (Abstract Only)
Bassil, N.V., Jung, S., Lee, T., Cheng, C., Zheng, P., Bubble, K., Yu, J., Humann, J., Hough, H., Main, D. 2023. Resources for genomics, genetics and breeding research in GDR, the Genome Database for Rubus. International Rubus Ribes Symposium.

Strategies to develop and apply a test for detection of ringspot viruses in dagger nematodes in small fruits and grapevines - (Abstract Only)
Olaya, C., Reinhold Aboosaie, L.A., Mollov, D.S., Zasada, I.A. 2023. Strategies to develop and apply a test for detection of ringspot viruses in dagger nematodes in small fruits and grapevines. Journal of Nematology. e2023-1(55):84. https://doi.org/10.2478/jofnem-2023-0047.