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ARS Home » Northeast Area » Kearneysville, West Virginia » Appalachian Fruit Research Laboratory » Innovative Fruit Production, Improvement, and Protection » Research » Publications at this Location » Publication #366811
Research Project: Integrated Orchard Management and Automation for Deciduous Tree Fruit Crops (BRIDGE PROJECT)

Location: Innovative Fruit Production, Improvement, and Protection

Title: Code and data from: segmenting root systems in x-ray computed tomography images using level sets

Author
item Tabb, Amy
item DUNCAN, KEITH - Danforth Plant Science Center
item TOPP, CHRISTOPHER - Danforth Plant Science Center

Submitted to: Ag Data Commons
Publication Type: Database / Dataset
Publication Acceptance Date: 7/12/2019
Publication Date: 7/12/2019
Citation: Tabb, A., Duncan, K., Topp, C. 2019. Code and data from: segmenting root systems in x-ray computed tomography images using level sets. Zenodo. http://doi.org/10.5281/zenodo.3333709.
DOI: https://doi.org/10.5281/zenodo.3333709

Interpretive Summary:

Technical Abstract: This record contains code and data for segmentation using a three-dimensional level-set method written by Amy Tabb in C++. The record also contains two datasets of root systems in media imaged with X-Ray CT and the results of running the code on those datasets. The code will also perform a preprocessing task in three-dimensional image sets and a dataset for that purpose is included as well. This work is a companion to the paper, "Segmenting root systems in X-ray computed tomography images using level sets" (WACV 2018), by the authors of this record.