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ARS Home » Plains Area » Kerrville, Texas » Knipling-Bushland U.S. Livestock Insects Research Laboratory » Cattle Fever Tick Research Unit » Research » Publications at this Location » Publication #376654
Research Project: Integrated Pest Management of Cattle Fever Ticks

Location: Cattle Fever Tick Research Unit

Title: Raw Pacific Biosciences and Illumina sequencing reads and assembled genome data for the cattle ticks Rhipicephalus microplus and Rhipicephalus annulatus

Author
item GHAFFARI, NOUSHIN - Prairie View A & M University
item Guerrero, Felicito
item Bendele, Kylie
item JOHNSON, CHARLES - Texas A&M Agrilife
item TEEL, PETE - Texas A&M University

Submitted to: National Center for Biotechnology Information (NCBI)
Publication Type: Other
Publication Acceptance Date: 12/1/2019
Publication Date: N/A
Citation: N/A

Interpretive Summary: The sequence data for this project can be found at the National Center for Biotechnology Information (NCBI) under BioProject accession numbers PRJNA552342 (R. microplus) and PRJNA593711 (R. annulatus). The BioSample accession numbers for the R. microplus sample is SAMN06075429 and the R. annulatus sample is SAMN12497614. The raw read data can be found in the Sequence Read Archive (SRA) under accession numbers SRR9875273 for the R. microplus PacBio Sequel reads, SRR10034978 for the R. microplus Illumina Dovetail Hi-C reads and SRR10009121 for the R. annulatus PacBio Sequel reads. The assembled genomes can be found under Whole Genome Shotgun (WGS) accession numbers WOVZ00000000 for R. microplus and WOVY00000000 for R. annulatus.

Technical Abstract: The sequence data for this project can be found at the National Center for Biotechnology Information (NCBI) under BioProject accession numbers PRJNA552342 (R. microplus) and PRJNA593711 (R. annulatus). The BioSample accession numbers for the R. microplus sample is SAMN06075429 and the R. annulatus sample is SAMN12497614. The raw read data can be found in the Sequence Read Archive (SRA) under accession numbers SRR9875273 for the R. microplus PacBio Sequel reads, SRR10034978 for the R. microplus Illumina Dovetail Hi-C reads and SRR10009121 for the R. annulatus PacBio Sequel reads. The assembled genomes can be found under Whole Genome Shotgun (WGS) accession numbers WOVZ00000000 for R. microplus and WOVY00000000 for R. annulatus.