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Research Project: Integrative Genomic and Biological Approaches to Detect and Manage Emerging Foreign Fungal Plant Pathogens

Location: Foreign Disease-Weed Science Research

Title: Supporting data for: Genome evolution and transcriptome plasticity associated with adaptation to monocot and eudicot plants in Colletotrichum fungi

Author
item BARONCELLI, RICCARDO - Universita Di Bologna
item COBO-DÍAZ, JOSÉ - University Of Salamanca
item BENOCCI, TIZIANO - University Of Leon
item PENG, MAO - Utrecht University
item BATTAGLIA, EVY - Utrecht University
item HARIDAS, SAJEET - Energy Joint Genome Institute
item ANDREOPOULOS, WILLIAM - Energy Joint Genome Institute
item LABUTTI, KURT - Energy Joint Genome Institute
item PANGILINAN, JASMYN - Energy Joint Genome Institute
item LIPZEN, ANNA - Energy Joint Genome Institute
item KORIABINE, MAXIM - Energy Joint Genome Institute
item BAUER, DIANE - Energy Joint Genome Institute
item LE FLOCH, GAETAN - Universite' De Bretagne
item MÄKELÄ, MIIA - University Of Helsinki
item DRULA, ELODIE - King Abdulaziz University
item HENRISSAT, BERNARD - Aix-Marseille University
item GRIGORIEV, IGOR - University Of California Berkeley
item Crouch, Jo Anne
item DE VRIES, RONALD - Utrecht University
item SUKNO, SERENELLA - University Of Salamanca
item THON, MICHAEL - University Of Salamanca

Submitted to: Gigascience
Publication Type: Database / Dataset
Publication Acceptance Date: 5/24/2024
Publication Date: 5/24/2024
Citation: Baroncelli, R., Cobo-Díaz, J., Benocci, T., Peng, M., Battaglia, E., Haridas, S., Andreopoulos, W., Labutti, K., Pangilinan, J., Lipzen, A., Koriabine, M., Bauer, D., Le Floch, G., Mäkelä, M.R., Drula, E., Henrissat, B., Grigoriev, I., Crouch, J., De Vries, R., Sukno, S., Thon, M. 2024. Supporting data for: Genome evolution and transcriptome plasticity associated with adaptation to monocot and eudicot plants in Colletotrichum fungi. Gigascience. https://doi.org/10.5524/102528.
DOI: https://doi.org/10.5524/102528

Interpretive Summary: See technical abstract

Technical Abstract: Colletotrichum is an important plant pathogen and a model system to study evolution in fungi. We investigate the adaptation to different cell wall compositions combining genomics and transcriptomics. Our results suggest that the ancestral Colletotrichum were associated with dicot plants and certain branches progressively adapted to different monocot hosts, reshaping the gene content and its regulation.