Zachary Foster
Horticultural Crops Disease and Pest Management Research Unit
Research Plant Pathologist
Phone: (541) 738-4082
Fax:
(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)
Publications
(Clicking on the reprint icon
will take you to the publication reprint.)
|
 |
|
Krisp: A Python package to aid in the design of CRISPR and amplification-based diagnostic assays from whole genome sequencing data
- (Peer Reviewed Journal)
|
|
Foster, Z.S.L., Tupper, A.S., Press, C.M., Grunwald, N.J. 2024. Krisp: A Python package to aid in the design of CRISPR and amplification-based diagnostic assays from whole genome sequencing data. PLoS Computational Biology. 20(5):e1012139. https://doi.org/10.1371/journal.pcbi.1012139.
|
 |
|
Metabarcoding for plant pathologists
- (Review Article)
|
|
Sudermann, M., Foster, Z.S., Chang, J., Grünwald, N.J. 2023. Metabarcoding for plant pathologists. Canadian Journal of Plant Pathology. 46(2):146-160. https://doi.org/10.1080/07060661.2023.2290041.
|
|
|
Genetic Diversity, Evolution, and Diagnosis of Sugarcane Yellow Leaf Virus from 19 Sugarcane-Producing Locations
- (Peer Reviewed Journal)
|
|
Rott, P., Grinstead, S.C., Dallot, S., Foster, Z.S., Daugrois, J., Fernandez, E., Kaye, C., Hendrickson, L., Hu, X., Adhikari, B.N., Malapi-Wight, M., Grunwald, N.J., Roumagnac, P., Mollov, D.S. 2023. Genetic Diversity, Evolution, and Diagnosis of Sugarcane Yellow Leaf Virus from 19 Sugarcane-Producing Locations. Plant Disease. https://doi.org/10.1094/PDIS-10-22-2405-RE.
|
|
|
Openness and computational reproducibility in plant pathology: Where we stand and a way forward
- (Peer Reviewed Journal)
|
|
Sparks, A.H., Del Ponte, E., Alves, K., Foster, Z.S., Grunwald, N.J. 2023. Openness and computational reproducibility in plant pathology: Where we stand and a way forward. Phytopathology. https://doi.org/10.1094/PHYTO-10-21-0430-PER.
|
|
|
A new oomycete metabarcoding method using the rps10 gene
- (Peer Reviewed Journal)
|
|
Foster, Z.S., Albornoz, F.E., Fieland, V.J., Larsen, M.M., Jones, F.A., Tyler, B.M., Nguyen, H.D., Burgess, T., Riddell, C., Voglmayr, H., Martin, F.N., Grunwald, N.J. 2022. A new oomycete metabarcoding method using the rps10 gene. Phytobiomes Journal. 6(3):214-226. https://doi.org/10.1094/PBIOMES-02-22-0009-R.
|
|
|
|
