Nilgai

1 - Species mapped to cattle 2 - Banteng 3 - Bison 4 - Bongo 5 - Buffalo, Cape 6 - Buffalo, water 7 - Bushbuck 8 - Caribou 9 - Eland 10 - Gaur 11 - Gemsbok 12 - Moose 13 - Muskox 14 - Nilgai 15 - Pronghorn 16 - Sheep, bighorn 17 - Sheep, domestic 18 - Wildebeest 19 - Yak 20 - Temp

 

10-20x WGS of Nilgai (Boselaphus tragocamelus)

To view DNA sequence data for an animal or a breed group:

• Download and install a desktop version of IGV (for example, version 2.12.2)

• In IGV, under the "Genomes" tab, choose "Selected Hosted Genome..." and select "Cow (bosTau9)", [OK]

• Copy a URL link address (right-click) and paste into IGV:  File> "Load from URL..."

  • Note:  left-clicking on a URL under "Public links" will start a 30GB .bam file download (not necessary)

 

	Species/breeda	Animal ID	Public links	Estimated mapped read coverage	GB >Q20b
	Nilgai	200726001	URL	16x	48.5
	Nilgai	200726009	URL	14x	41.2
	Nilgai	200726002	URL	18x	54.8
	Nilgai	200726005	URL	16x	47.3
	Nilgai	200726007	URL	22x	66.6
	Nilgai	200726008	URL	16x	48.8
	Nilgai	200726010	URL	14x	41.3
	Nilgai	200726011	URL	14x	40.7
	Nilgai, 8 genomes URL
			Total	104x	312.7
			Average	15x	44.7
aCitation:
doi:
bTotal gigabases of genomic sequence with a quality score greater than or equal to 20. Tru-Seq paired-end libraries were sequenced with NextSeq500 high-output kits (300 cycles, Illumina Inc. San Diego CA).
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