Research Project: Biotechnology Strategies for Understanding and Improving Disease Resistance and Nutritional Traits in Soybeans and Beans

Location: Soybean Genomics & Improvement Laboratory

Publications (Clicking on the reprint icon will take you to the publication reprint.)

Metabolite profiling of a high protein fast neutron soybean mutant revealed increased storage of methionine and flavonoids - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Jones, J., Natarajan, S.S. 2023. Metabolite profiling of a high protein fast neutron soybean mutant revealed increased storage of methionine and flavonoids. Crop Science. 64(1):303-313. https://doi.org/10.1002/csc2.21110.

Metabolic profiling of a fast neutron soybean mutant reveals increased abundance of isoflavones - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Slovin, J.P., Natarajan, S.S. 2023. Metabolic profiling of a fast neutron soybean mutant reveals increased abundance of isoflavones. Journal of Agricultural and Food Chemistry. 71(26):9994-10003. https://doi.org/10.1021/acs.jafc.3c01493.

Metabolite profiling of a fast neutron soybean mutant reveals an increased abundance of isoflavones - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Slovin, J.P., Natarajan, S.S. 2023. Metabolite profiling of a fast neutron soybean mutant reveals an increased abundance of isoflavones. Food Chemistry. 71(26):9994-10003. https://doi.org/10.1021/acs.jafc.3c01493.

Disruptive effects of resveratrol on a bacterial pathogen of beans - (Peer Reviewed Journal)
Cooper, B. 2022. Disruptive effects of resveratrol on a bacterial pathogen of beans. Journal of Proteome Research. 22(1):204-214. https://doi.org/10.1021/acs.jproteome.2c00633.

The detriment of salicylic acid to the Pseudomonas savastanoi pv. phaseolicola proteome - (Peer Reviewed Journal)
Cooper, B. 2022. The detriment of salicylic acid to the Pseudomonas savastanoi pv. phaseolicola proteome. Molecular Plant-Microbe Interactions. https://doi.org/10.1094/MPMI-05-22-0104-R.

Protein profiling of fast neutron soybean mutant seeds reveal differential accumulation of seed and iron storage proteins - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Natarajan, S.S. 2022. Protein profiling of fast neutron soybean mutant seeds reveal differential accumulation of seed and iron storage proteins. Phytochemistry. 200. Article 113214. https://doi.org/10.1016/j.phytochem.2022.113214.

Salicylic acid and phytoalexin induction by a bacterium that causes halo blight in beans - (Peer Reviewed Journal)
Cooper, B., Campbell, K., Garrett, W.M. 2022. Salicylic acid and phytoalexin induction by a bacterium that causes halo blight in beans. Phytopathology. https://doi.org/10.1094/PHYTO-12-21-0496-R.

Quantitative proteomic analyses reveal the dynamics of protein and amino acid accumulation during soybean seed development - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Natarajan, S.S. 2021. Quantitative proteomic analyses reveal the dynamics of protein and amino acid accumulation during soybean seed development. Proteomics. Article e2100143. https://doi.org/10.1002/pmic.202100143.

Bacterial self-toxicity induced by a plant immune system - (Peer Reviewed Journal)
Cooper, B., Beard, H.S., Yang, R., Garrett, W.M., Campbell, K. 2021. Bacterial self-toxicity induced by a plant immune system. Journal of Proteome Research. 20:3664-3677. https://doi.org/10.1021/acs.jproteome.1c00232.

Proteomic identification and meta-analysis in Salvia hispanica RNA-Seq de novo assemblies - (Peer Reviewed Journal)
Klein, A., Husselmann, L.H., Williams, A., Bell, L., Cooper, B., Ragar, B., Tabb, D.L. 2021. Proteomic identification and meta-analysis in Salvia hispanica RNA-Seq de novo assemblies. Plants. 10(4):765. https://doi.org/10.3390/plants10040765.

Genomic resources for Pseudomonas syringae pv. phaseolicola races 5 and 8 - (Peer Reviewed Journal)
Cooper, B., Yang, R. 2021. Genomic resources for Pseudomonas syringae pv. phaseolicola races 5 and 8. Phytopathology. 111:893-895. https://doi.org/10.1094/phyto-10-20-0462-a.

Enhanced protein separation after removing soluble sugars from ground soybean seeds - (Peer Reviewed Journal)
Islam, N., Luthria, D.L., Kotha, R.R., Natarajan, S.S. 2020. Enhanced protein separation after removing soluble sugars from ground soybean seeds. Analytical Biochemistry. 610:113931. https://doi.org/10.1016/j.ab.2020.113931.

The Proteomics of Resistance to Halo Blight in Common Bean - (Peer Reviewed Journal)
Cooper, B., Campbell, K., Beard, H.S., Garrett, W.M., Ferreira, M.E. 2020. The Proteomics of Resistance to Halo Blight in Common Bean. Molecular Plant-Microbe Interactions. 33(9):1161-1175. https://doi.org/10.1094/MPMI-05-20-0112-R.

Proteomic profiling of fast neutron-induced soybean mutant unveiled pathways associated with increased seed protein content - (Peer Reviewed Journal)
Islam, N., Krishnan, H.B., Natarajan, S.S. 2020. Proteomic profiling of fast neutron-induced soybean mutant unveiled pathways associated with increased seed protein content. Journal of Proteome Research. 19:3936-3944. https://doi.org/10.1021/acs.jproteome.0c00160.

Benzothiadiazole conditions the bean proteome for immunity to bean rust - (Peer Reviewed Journal)
Cooper, B., Beard, H.S., Garrett, W.M., Campbell, K. 2020. Benzothiadiazole conditions the bean proteome for immunity to bean rust. Molecular Plant-Microbe Interactions. https://doi.org/10.1094/MPMI-09-19-0250-R.

Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants - (Peer Reviewed Journal)
Islam, N., Stupar, R., Luthria, D.L., Garrett, W.M., Stec, A.O., Roessler, J., Natarajan, S.S. 2019. Genomic changes and biochemical alterations of seed protein and oil content in a subset of fast neutron induced soybean mutants. Biomed Central (BMC) Plant Biology. 19(1):420. https://doi.org/10.1186/s12870-019-1981-x.

Quantitative proteomics reveals a role for SERINE/ARGININE-Rich 45 in regulating RNA metabolism and modulating transcriptional suppression via the ASAP complex in Arabidopsis thaliana - (Peer Reviewed Journal)
Chen, S.L., Rooney, T.J., Hu, A.R., Beard, H.S., Garrett, W.M., Mangalath, L.M., Powers, J.J., Cooper, B., Zhang, X. 2019. Quantitative proteomics reveals a role for SERINE/ARGININE-Rich 45 in regulating RNA metabolism and modulating transcriptional suppression via the ASAP complex in Arabidopsis thaliana. Frontiers in Plant Science. 10:1116. https://doi.org/10.3389/fpls.2019.01116.

Quantitative proteomic analysis of low linolenic acid transgenic soybean reveals perturbations of fatty acid metabolic pathways - (Peer Reviewed Journal)
Islam, N., Bates, P.D., John, M.K., Krishnan, H.B., Zhang, Z., Luthria, D.L., Natarajan, S.S. 2019. Quantitative proteomic analysis of low linolenic acid transgenic soybean reveals perturbations of fatty acid metabolic pathways. Proteomics. 19:1-11. https://doi.org/10.1002/pmic.201800379.

Re-evaluation of the ethylene-dependent and -independent pathways in the regulation of floral and organ abscission - (Peer Reviewed Journal)
Meir, S., Philosoph-Hadas, S., Riov, J., Tucker, M., Patterson, S.E., Roberts, J.A. 2019. Re-evaluation of the ethylene-dependent and -independent pathways in the regulation of floral and organ abscission. Journal of Experimental Botany. 70(5):1461-1467. https://doi.org/10.1093/jxb/erz038.