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ARS Home » Midwest Area » Columbia, Missouri » Plant Genetics Research » Research » Research Project #444182
Research Project: Redesigning Soybeans for a Resilient Future of Food, Feeds, and Bio-Industry

Location: Plant Genetics Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Allele-tagged TaqMan® PCR genotyping assays for high-throughput detection of soybean cyst nematode resistance Reprint Icon - (Peer Reviewed Journal)
Usovsky, M., Bilyeu, K.D., Bent, A., Scaboo, A. 2024. Allele-tagged TaqMan® PCR genotyping assays for high-throughput detection of soybean cyst nematode resistance. Molecular Biology Reports. 52. https://doi.org/10.1007/s11033-024-10114-6.

Association mapping for water use efficiency in soybean identifies previously reported and novel loci and permits genomic prediction Reprint Icon - (Peer Reviewed Journal)
Chamarthi, S., Purcell, L.C., Fritschi, F.B., Ray, J.D., Smith, J.R., Kaler, A.S., King, A.C., Gillman, J.D. 2024. Association mapping for water use efficiency in soybean identifies previously reported and novel loci and permits genomic prediction. Frontiers in Plant Science. 15. https://doi.org/10.3389/fpls.2024.1486736.

Hydrolysates from sorghum crude kafirin extract exhibit ice recrystallization inhibition activity Reprint Icon - (Peer Reviewed Journal)
Ollis, A., Wang, T., Krishnan, H.B., Dia, V.P. 2024. Hydrolysates from sorghum crude kafirin extract exhibit ice recrystallization inhibition activity. ACS Food Science and Technology. https://doi.org/10.1021/acsfoodscitech.4c00312.

Redesigning soybean with improved oil and meal traits Reprint Icon - (Peer Reviewed Journal)
Kim, J., Scaboo, A., Martin Rainey, K., Fritschi, F.B., Bilyeu, K.D. 2024. Redesigning soybean with improved oil and meal traits. Theoretical and Applied Genetics. 137. https://doi.org/10.1007/s00122-024-04732-8.

Differential symbiotic compatibilities between rhizobium strains and cultivated and wild soybeans revealed by anatomical and transcriptome analyses Reprint Icon - (Peer Reviewed Journal)
Bahrami Zadegan, S., Kim, W., Abbas, H.K., Kim, S., Krishnan, H.B., Hewezi, T. 2024. Differential symbiotic compatibilities between rhizobium strains and cultivated and wild soybeans revealed by anatomical and transcriptome analyses. Frontiers in Plant Science. 15. https://doi.org/10.3389/fpls.2024.1435632.

Soybean pod shattering resistance allele pdh1 and marker-assisted selection Reprint Icon - (Peer Reviewed Journal)
Shimbwambwa, D., Nachilima, C., Hamabwe, S., Kuwabo, K., Chigeza, G., Bilyeu, K.D., Kamfwa, K. 2024. Soybean pod shattering resistance allele pdh1 and marker-assisted selection. Plant Breeding. 5(4). https://doi.org/10.1002/pei3.70003.

Pellet die thickness and a commercial throughput agent interacted to demonstrate that high frictional heat increased apparent ileal amino acid digestibility, but did not influence trypsin inhibitor activity or male broiler pe Reprint Icon - (Peer Reviewed Journal)
Knarr, L., Bowen, K., Ferrel, J., Kim, S., Krishnan, H.B., Moritz, J. 2024. Pellet die thickness and a commerical throughput agent interacted to demonstrate that high frictional heat increased apparent ileal amino acid digestibility, but did not influence trypsin inhibitor activity or male broiler pe. Journal of Applied Poultry Research. 33(4). https://doi.org/10.1016/j.japr.2024.100460.

Generation of new ß-conglycinin-deficient soybean lines by editing the lincRNA lincCG1 using the CRISPR/Cas9 system Reprint Icon - (Peer Reviewed Journal)
Song, B., Luo, T., Fan, Y., Li, M., Qiu, Z., Tian, Y., Shang, Y., Ma, C., Liu, C., Cao, Q., Peng, Y., Xu, P., Krishnan, H.B., Wang, Z., Zhang, S., Liu, S. 2024. Generation of new ß-conglycinin-deficient soybean lines by editing the lincRNA lincCG1 using the CRISPR/Cas9 system. Journal of Agricultural and Food Chemistry. https://doi.org/10.1021/acs.jafc.4c02269.

Bowman-Birk inhibitor mutants of soybean generated by CRISPR-Cas9 reveal drastic reductions in trypsin and chymotrypsin inhibitor activities Reprint Icon - (Peer Reviewed Journal)
Kim, W., Gillman, J.D., Kim, S., Liu, J., Janga, M.R., Stupar, R.M., Krishnan, H.B. 2024. Bowman-Birk inhibitor mutants of soybean generated by CRISPR-Cas9 reveal drastic reductions in trypsin and chymotrypsin inhibitor activities. International Journal of Molecular Sciences. 25(11). Article 5578. https://doi.org/10.3390/ijms25115578.

Development of a novel, small scale cold screw press protocol for rapid soybean processing and coproduct evaluation Reprint Icon - (Peer Reviewed Journal)
Sheoran, S.S., Vardhanabhuti, B., Bilyeu, K.D., Flint Garcia, S.A., Wan, C., Somavat, P. 2024. Development of a novel, small scale cold screw press protocol for rapid soybean processing and coproduct evaluation. Food and Bioproducts Processing. 146:89-102. https://doi.org/10.1016/j.fbp.2024.05.004.

Calcium induces the cleavage of NopA and regulates the expression of nodulation genes and secretion of T3SS effectors in Sinorhizobium fredii NGR234 Reprint Icon - (Peer Reviewed Journal)
Kim, W., Acosta-Jurado, S., Kim, S., Krishnan, H.B. 2024. Calcium induces the cleavage of NopA and regulates the expression of nodulation genes and secretion of T3SS effectors in Sinorhizobium fredii NGR234. International Journal of Molecular Sciences. 25(6). Article 3443. https://doi.org/10.3390/ijms25063443.

Deciphering temporal growth patterns in maize: integrative modeling of phenotype dynamics and underlying genomic variations Reprint Icon - (Peer Reviewed Journal)
Adak, A., Murray, S.C., Washburn, J.D. 2024. Deciphering temporal growth patterns in maize: integrative modeling of phenotype dynamics and underlying genomic variations. New Phytologist. 242:121-136. https://doi.org/10.1111/nph.19575.

Natural and artificial selection of multiple alleles revealed through genomic analyses Reprint Icon - (Peer Reviewed Journal)
Biova, J., Kanovska, I., Chan, Y., Immadi, M.S., Joshi, T., Bilyeu, K.D., Skrabisova, M. 2024. Natural and artificial selection of multiple alleles revealed through genomic analyses. Frontiers in Genetics. 14. Article 1320652. https://doi.org/10.3389/fgene.2023.1320652.

Cataloging SCN resistance loci in North American public soybean breeding programs Reprint Icon - (Peer Reviewed Journal)
Mahmood, A., Bilyeu, K.D., Skrabisova, M., Biova, J., De Meyer, E., Meinhardt, C., Usovsky, M., Song, Q., Lorenz, A., Mitchum, M., Shannon, G., Scaboo, A. 2023. Cataloging SCN resistance loci in North American public soybean breeding programs. Frontiers in Plant Science. 14. Article e1270546. https://doi.org/10.3389/fpls.2023.1270546.

Genomic variations explorer (GenVarX): a toolset for annotating promoter and CNV regions using genotypic and phenotypic differences Reprint Icon - (Peer Reviewed Journal)
Chan, Y., Biova, J., Mahmood, A., Dietz, N., Bilyeu, K.D., Skrabisova, M., Joshi, T. 2023. Genomic variations explorer (GenVarX): a toolset for annotating promoter and CNV regions using genotypic and phenotypic differences. Frontiers in Genetics. 14. Article fgene.2023.1251382. https://doi.org/10.3389/fgene.2023.1251382.