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ARS Home » Southeast Area » Mississippi State, Mississippi » Poultry Research » Research » Research Project #441425
Research Project: Intervention Strategies to Mitigate Avian Escherichia coli Infections and Antimicrobial Resistance in the Poultry Environment

Location: Poultry Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Genome sequence of Mycoplasma gallisepticum strain A5969 - (Peer Reviewed Journal)

High-throughput Oxford Nanopore sequencing-based approach for the multilocus sequence typing analysis of large-scale avian Escherichia coli study in Mississippi Reprint Icon - (Peer Reviewed Journal)
Jia, L., Arick Ii, M.A., Hsu, C., Peterson, D.G., Evans, J.D., Robinson, K., Sukumaran, A., Ramachandran, R., Adhikari, P., Zhang, L. 2024. High-throughput Oxford Nanopore sequencing-based approach for the multilocus sequence typing analysis of large-scale avian Escherichia coli study in Mississippi. Poultry Science. 103:104067. https://doi.org/10.1016/j.psj.2024.104067.

Evaluating the effects of virulence genotype, swarming motility, and multi-locus sequence types of Escherichia coli of layer chicken through an embryo lethality assay - (Peer Reviewed Journal)

Complete genome sequences of two avian pathogenic Escherichia coli strains isolated from broilers exhibiting colibacillosis in Mississippi Reprint Icon - (Peer Reviewed Journal)
Jia, L., Arick Ii, M.A., Hsu, C., Peterson, D.G., Evans, J.D., Robinson, K., Adhikari, P., Zhang, L. 2024. Complete genome sequences of two avian pathogenic Escherichia coli strains isolated from broilers exhibiting colibacillosis in Mississippi. Microbiology Resource Announcements. 13:e01020-23. https://doi.org/10.1128/mra.01020-23.

Avian pathogenic Escherichia coli (APEC) in broiler breeders: An overview Reprint Icon - (Peer Reviewed Journal)
Joseph, J., Zhang, L., Adhikari, P., Evans, J.D., Ramachandran, R. 2023. Avian pathogenic Escherichia coli (APEC) in broiler breeders: An overview. Heliyon. 12:1280. https://doi.org/10.3390/pathogens12111280.

Influence of pine and miscanthus biochar on the water activity and moisture sorption isotherms of used broiler litter Reprint Icon - (Peer Reviewed Journal)
Linhoss, J., Mohammadi-Aragh, M., Evans, J.D. 2023. Influence of pine and miscanthus biochar on the water activity and moisture sorption isotherms of used broiler litter. Heliyon. 9:e22618. https://doi.org/10.1016/j.heliyon.2023.e22618.

In ovo administration of the Marek's disease vaccine in conjunction with 25-hydroxyvitamin D3 and its subsequent effects on the performance and immunity-related characteristics of Ross 708 broiler hatchlings Reprint Icon - (Peer Reviewed Journal)
Fatemi, S.A., Mousstaaid, A., Williams, C.J., Deines, J., Poudel, S., Poudel, I., Collins Elliott, K.E., Walters, E.R., Forcier, N., Peebles, E.D. 2023. In ovo administration of the Marek's disease vaccine in conjunction with 25-hydroxyvitamin D3 and its subsequent effects on the performance and immunity-related characteristics of Ross 708 broiler hatchlings. Poultry Science. 103(1). Article 103199. https://doi.org/10.1016/j.psj.2023.103199.

Effects of the in ovo injection of an Escherichia coli vaccine on the hatchability and quality characteristics of commercial layer hatchlings Reprint Icon - (Peer Reviewed Journal)
Fatemi, S.A., Lindsey, L.L., Evans, J.D., Collins Elliott, K.E., Leigh, S.A., Robinson, K., Mousstaaid, A., Gerard, P.D., Peebles, E.D. 2023. Effects of the in ovo injection of an Escherichia coli vaccine on the hatchability and quality characteristics of commercial layer hatchlings. Poultry Science. 102(11):103057. https://doi.org/10.1016/j.psj.2023.103057.

Modeling long distance airborne transmission of highly pathogenic avian influenza carried by dust particles Reprint Icon - (Peer Reviewed Journal)
Nguyen, X.D., Zhao, Y., Lin, J., Purswell, J.L., Tabler, T., Voy, B., Hawkins, S., Evans, J.D. 2023. Modeling long distance airborne transmission of highly pathogenic avian influenza carried by dust particles. Scientific Reports. 13:16255. https://doi.org/10.1038/s41598-023-42897-2.

Characterization of avian pathogenic Escherichia coli isolated from broiler breeders with colibacillosis in Mississippi Reprint Icon - (Peer Reviewed Journal)
Joseph, J., Jennings, M., Barbieri, N., Zhang, L., Adhikari, P., Ramachandran, R. 2023. Characterization of avian pathogenic Escherichia coli isolated from broiler breeders with colibacillosis in Mississippi. Poultry. 2(1):24-39. https://doi.org/10.3390/poultry2010004.

Variable effects of the in ovo administration of an Escherichia coli vaccine in the amnion or air cell on commercial layer embryo and hatchling development Reprint Icon - (Peer Reviewed Journal)
Lindsey, L.L., Collins Elliott, K.E., Fratemi, S.A., Evans, J.D., Mousstaaid, A., Gerard, P.D., Peebles, E.D. 2022. Variable effects of the in ovo administration of an Escherichia coli vaccine in the amnion or air cell on commercial layer embryo and hatchling development. Poultry. 1(4):278-290. https://doi.org/10.3390/poultry1040023.

Genomic diversity, pathogenicity and antimicrobial resistance of Escherichia coli isolated from poultry in the southern United States Reprint Icon - (Peer Reviewed Journal)
Feng, A., Akter, S., Leigh, S.A., Wang, H., Pharr, G.T., Evans, J.D., Branton, S.L., Landinez, M.P., Pace, L., Wan, X. 2023. Genomic diversity, pathogenicity and antimicrobial resistance of Escherichia coli isolated from poultry in the southern United States. BMC Microbiology. 23:15. https://doi.org/10.1186/s12866-022-02721-9.

Effect of ultraviolet radiation on reducing airborne Escherichia coli carried by poultry litter particles Reprint Icon - (Peer Reviewed Journal)
Nguyen, X.D., Zhao, Y., Evans, J.D., Lin, J., Voy, B., Purswell, J.L. 2022. Effect of ultraviolet radiation on reducing airborne Escherichia coli carried by poultry litter particles. Animals. 12(22):3170. https://doi.org/10.3390/ani12223170.

A compilation of virulence-associated genes that are frequently reported in avian pathogenic Escherichia coli (APEC) compared to other E. coli Reprint Icon - (Peer Reviewed Journal)
Ovi, F., Zhang, L., Nabors, H., Jia, L., Adhikari, P. 2023. A compilation of virulence-associated genes that are frequently reported in avian pathogenic Escherichia coli (APEC) compared to other E. coli. Journal of Applied Microbiology. 134(3). Article lxad014. https://doi.org/10.1093/jambio/lxad014.

Ability of garlic and ginger oil to reduce Salmonella in post-harvest poultry Reprint Icon - (Peer Reviewed Journal)
Robinson, K., Assumpcao, A., Arsi, K., Donoghue, A.M., Jesudhasan, P. 2022. Ability of garlic and ginger oil to reduce Salmonella in post-harvest poultry. Animals. 12(21):2974. https://doi.org/10.3390/ani12212974.

Effect of Salmonella Typhimurium colonization on microbiome maturation and blood leukocyte populations in broiler chickens Reprint Icon - (Peer Reviewed Journal)
Robinson, K., Assumpcao, A., Arsi, K., Erf, G.F., Donoghue, A.M., Jesudhasan, P. 2022. Effect of Salmonella Typhimurium colonization on microbiome maturation and blood leukocyte populations in broiler chickens. Animals. 12(20):2867. https://doi.org/10.3390/ani12202867.

Evaluation of bioaerosol samplers for airborne Escherichia coli carried by poultry litter particles Reprint Icon - (Peer Reviewed Journal)
Nguyen, X.D., Zhao, Y., Evans, J.D., Lin, J., Schneider, L., Voy, B., Hawkins, S.A., Purswell, J.L. 2022. Evaluation of bioaerosol samplers for airborne Escherichia coli carried by poultry litter particles. Journal of the ASABE. 65(4):825-833. https://doi.org/10.13031/ja.15057.

Prevalence and molecular characteristics of avian pathogenic Escherichia coli in “No Antibiotics Ever” broiler farms Reprint Icon - (Peer Reviewed Journal)
Fancher, C.A., Thames, H.T., Colvin, M.G., Smith, M., Easterling, A., Nuthalapati, N., Zhang, L., Kiess, A., Dinh, T., Sudumaran, A. 2021. Prevalence and molecular characteristics of avian pathogenic Escherichia coli in “No Antibiotics Ever” broiler farms. Microbiology Spectrum. 9(3):e00834-21. https://doi.org/10.1128/Spectrum.00834-21.

Evaluation of bioaerosol samplers for collecting airborne E. coli carried by dust particles from poultry litter Reprint Icon - (Peer Reviewed Journal)
Nguyen, X.D., Zhao, Y., Evans, J.D., Lin, J., Schneider, L., Voy, B., Hawkins, S.A., Purswell, J.L. 2021. Evaluation of bioaerosol samplers for collecting airborne E. coli carried by dust particles from poultry litter. ASABE Annual International Meeting. https://doi.org/10.13031/aim.202100065.

Effects of in ovo probiotic administration on the incidence of avian pathogenic Escherichia coli in broilers and an evaluation on its virulence and antimicrobial resistance properties Reprint Icon - (Peer Reviewed Journal)

Complete genome sequence of multidrug-resistant avian pathogenic Escherichia coli strain APEC-O2-MS1170 Reprint Icon - (Peer Reviewed Journal)
Li, T., Castaneda, D., Arick, M., Hsu, C., Kiess, A., Zhang, L. 2020. Complete genome sequence of multidrug-resistant avian pathogenic Escherichia coli strain APEC-O2-MS1170. Journal of Global Antimicrobial Resistance. 23:401-403. https://doi.org/10.1016/j.jgar.2020.11.009.

Avian pathogenic Escherichia coli and clostridium perfringens: Challenges in no antibiotics ever broiler production and potential solutions Reprint Icon - (Peer Reviewed Journal)
Fancher, C., Zhang, L., Kiess, A., Adhikari, P., Dinh, T., Sukumaran, A. 2020. Avian pathogenic Escherichia coli and clostridium perfringens: Challenges in no antibiotics ever broiler production and potential solutions. Microorganisms. 8(10):1533. https://doi.org/10.3390/microorganisms8101533.