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ARS Home » Pacific West Area » Albany, California » Western Regional Research Center » Crop Improvement and Genetics Research » Research » Research Project #444625
Research Project: GrainGenes- A Global Data Repository for Small Grains

Location: Crop Improvement and Genetics Research

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Chromosome-scale genome assembly of bread wheat’s wild relative Triticum timopheevii Reprint Icon - (Peer Reviewed Journal)
Grewal, S., Yang, C., Scholefiled, D., Ashling, S., Ghosh, S., Swarbreck, D., Collins, J., Yao, E., Sen, T.Z., Wilson, M., Yant, L., King, I., King, J. 2024. Chromosome-scale genome assembly of bread wheat’s wild relative Triticum timopheevii. Scientific Data - Nature. 11:420. https://doi.org/10.1038/s41597-024-03260-w.

Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traits Reprint Icon - (Peer Reviewed Journal)
Poretsky, E., Cagirici, B.H., Andorf, C.M., Sen, T.Z. 2024. Harnessing the predicted maize pan-interactome for putative gene function prediction and prioritization of candidate genes for important traits. Genetics. https://doi.org/10.1093/g3journal/jkae059.

Uniform gene and chromosome nomenclature system for oat (Avena L.) Reprint Icon - (Peer Reviewed Journal)
Jellen, E.N., Wright, C.P., Spannagl, M., Blake, V.C., Chong, J., Herrmann, M., Howarth, C.N., Huang, Y., Jia, J., Katsiotis, A., Langdon, T., Li, C., Park, R., Tinker, N.A., Sen, T.Z. 2024. Uniform gene and chromosome nomenclature system for oat (Avena L.). Crop and Pasture Science. https://doi.org/10.1071/CP23247.

One hundred years of comparative genetic and physical mapping in cultivated oat (Avena sativa L.) Reprint Icon - (Peer Reviewed Journal)
Wight, C.P., Blake, V.C., Jellen, E.N., Yao, E., Sen, T.Z., Tinker, N.A. 2024. One hundred years of comparative genetic and physical mapping in cultivated oat (Avena sativa L.). Crop and Pasture Science. https://doi.org/10.1071/CP23246.

PhosBoost: improved phosphorylation prediction using gradient boosting and protein language models Reprint Icon - (Peer Reviewed Journal)
Poretsky, E., Andorf, C.M., Sen, T.Z. 2023. PhosBoost: improved phosphorylation prediction using gradient boosting and protein language models. Journal of Plant Physiology. https://doi.org/10.1002/pld3.554.