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ARS Home » Plains Area » Clay Center, Nebraska » U.S. Meat Animal Research Center » Meat Safety and Quality » Research » Research Project #435565
Research Project: Identification, Genomic Characterization, and Metabolic Modeling of Foodborne Pathogens in the Meat Production Continuum

Location: Meat Safety and Quality

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)

Pathogenomes and virulence profiles of representative big six non-O157 serogroup Shiga toxin-producing Escherichia coli Reprint Icon - (Peer Reviewed Journal)
Kalalah, A.A., Koenig, S.S.K., Bono, J.L., Bosilevac, J.M., Eppinger, M. 2024. Pathogenomes and virulence profiles of representative big six non-O157 serogroup Shiga toxin-producing Escherichia coli. Frontiers in Microbiology. 15. Article 1364026. https://doi.org/10.3389/fmicb.2024.1364026.

Pathogenomes and virulence profiles of representative emerging big six non-O157 serogroups Shiga toxin-producing Escherichia coli - (Abstract Only)
Kalalah, A.A., Konig, S.S., Bono, J.L., Bosilevac, J.M., Eppinger, M. 2024. Pathogenomes and virulence profiles of representative emerging big six non-O157 serogroups Shiga toxin-producing Escherichia coli(abstract). American Society for Microbiology, No. 5613.

Identifying a list of Salmonella serotypes of concern to target for reducing risk of salmonellosis Reprint Icon - (Peer Reviewed Journal)
Katz, T.S., Harhay, D.M., Schmidt, J.W., Wheeler, T.L. 2024. Identifying a list of Salmonella serotypes of concern to target for reducing risk of salmonellosis. Frontiers in Microbiology. 15. Article 1307563. https://doi.org/10.3389/fmicb.2024.1307563.

Escherichia coli O157:H7 tir 255 T > A allele strains differ in chromosomal and plasmid composition Reprint Icon - (Peer Reviewed Journal)
Weinroth, M.D., Clawson, M.L., Harhay, G.P., Eppinger, M., Harhay, D.M., Smith, T.P.L., Bono, J.L. 2023. Escherichia coli O157:H7 tir 255 T > A allele strains differ in chromosomal and plasmid composition. Frontiers in Microbiology. 14. Article 1303387. https://doi.org/10.3389/fmicb.2023.1303387.

Incidence of multiserovar Salmonella populations in postharvest meat and poultry products - (Abstract Only)
Siceloff, A.T., Smith, R., Harhay, D.M., Shariat, N.W. 2023. Incidence of multiserovar Salmonella populations in postharvest meat and poultry products. [Abstract]. International Association for Food Protection Proceedings. T8-06.

Comparative genomics of Escherichia coli serotype O55:H7 using complete closed genomes Reprint Icon - (Peer Reviewed Journal)
Weinroth, M.D., Bono, J.L. 2022. Comparative genomics of Escherichia coli serotype O55:H7 using complete closed genomes. Microorganisms. 10(8): Article 1545. https://doi.org/10.3390/microorganisms10081545.

Rates of evolutionary change of resident Escherichia coli O157:H7 differ within the same ecological niche Reprint Icon - (Peer Reviewed Journal)
Weinroth, M.D., Clawson, M.L., Arthur, T.M., Wells, J., Harhay, D.M., Strachan, N., Bono, J.L. 2022. Rates of evolutionary change of resident Escherichia coli O157:H7 differ within the same ecological niche. BMC Genomics. 23. Article 275. https://doi.org/10.1186/s12864-022-08497-6.

Whole-genome sequencing analysis of Shiga toxin-producing Escherichia coli O22:H8 isolated from cattle prediction pathogenesis and colonization factors and position in STEC universe phylogeny Reprint Icon - (Peer Reviewed Journal)
Marques Da Silva, W., Larzabal, M., Figueira Aburjaile, F., Rivieri, N., Martorelli, L., Bono, J.L., Amadio, A., Cataldi, A. 2022. Whole-genome sequencing analysis of Shiga toxin-producing Escherichia coli O22:H8 isolated from cattle prediction pathogenesis and colonization factors and position in STEC universe phylogeny. Journal of Microbiology. 60:689-704. https://doi.org/10.1007/s12275-022-1616-z.

Twenty-four-month longitudinal study suggests little to no horizontal gene transfer in situ between third-generation cephalosporin-resistant Salmonella and third-generation cephalosporin-resistant Escherichia coli Reprint Icon - (Peer Reviewed Journal)
Schmidt, J.W., Murray, S.A., Dickey, A.M., Wheeler, T.L., Harhay, D.M., Arthur, T.M. 2022. Twenty-four-month longitudinal study suggests little to no horizontal gene transfer in situ between third-generation cephalosporin-resistant Salmonella and third-generation cephalosporin-resistant Escherichia coli in a beef cattle feedyard. Journal of Food Protection. 85(2):323-335. https://doi.org/10.4315/JFP-21-371.

Genomic analysis of shiga toxin-containing Escherichia coli O157:H7 isolated from Argentinean cattle Reprint Icon - (Peer Reviewed Journal)
Amadio, A., Bono, J.L., Irazoqui, M., Larzabal, M., Marques Da Siliva, W., Eberhardt, M.F., Riviere, N.A., Gally, D., Manning, S.D., Cataldi, A. 2021. Genomic analysis of shiga toxin-containing Escherichia coli O157:H7 isolated from Argentinean cattle. PLoS ONE. 16(10). Article e0258753. https://doi.org/10.1371/journal.pone.0258753.

Identification of phosphoglucomutase as an enteropathogen growth stimulating factor - (Research Notes)
Bosilevac, J.M., Richardson, A.J., Olstein, A.D. 2021. Identification of phosphoglucomutase as an enteropathogen growth stimulating factor. Nutrition Research and Food Science Journal. 4(1):1-12.