Research Project: Detection, Quantification and Characterization Technologies for Foodborne Pathogens

Location: Characterization and Interventions for Foodborne Pathogens

Publications (Clicking on the reprint icon will take you to the publication reprint.)

High-throughput homogenous assay for the direct detection of Listeria monocytogenes DNA - (Peer Reviewed Journal)
Armstrong, C.M., Capobianco Jr, J.A., Nguyen, S.C., Guragain, M., Liu, Y. 2024. High-throughput homogenous assay for the direct detection of Listeria monocytogenes DNA. Scientific Reports. 14:7026. https://doi.org/10.1038/s41598-024-56911-8.

Detection of Escherichia coli O157:H7 in ground beef using long-read sequencing - (Peer Reviewed Journal)
Counihan, K.L., Kanrar, S., Tilman, S.M., Capobianco Jr, J.A., Armstrong, C.M., Gehring, A.G. 2024. Detection of Escherichia coli O157:H7 in ground beef using long-read sequencing. Foods. 13(6):828. https://doi.org/10.3390/foods13060828.

Whole genome sequences, de novo assembly, and annotation of antibiotic resistant Campylobacter jejuni strains S27, S33, and S36 newly isolated from chicken meat - (Peer Reviewed Journal)
He, Y., Kanrar, S., Reed, S., Lee, J., Capobianco Jr, J.A. 2024. Whole genome sequences, de novo assembly, and annotation of antibiotic resistant Campylobacter jejuni strains S27, S33, and S36 newly isolated from chicken meat. Microorganisms. 12(1):159. https://doi.org/10.3390/microorganisms12010159.

Magnetic capture device for large volume sample analysis - (Peer Reviewed Journal)
Armstrong, C.M., Capobianco Jr, J.A., Lee, J. 2024. Magnetic capture device for large volume sample analysis. PLOS ONE. https://doi.org/10.1371/journal.pone.0297806.

Detection and isolation of Campylobacter spp. from raw meat - (Peer Reviewed Journal)
He, Y., Capobianco Jr, J.A., Armstrong, C.M., Chen, C., Counihan, K.L., Lee, J., Reed, S.A., Tilman, S.M. 2024. Detection and isolation of Campylobacter spp. from raw meat. The Journal of Visualized Experiments (JoVE). http://dx.doi.org/10.3791/66462.

Evaluation of long-read sequencing simulators to assess real-world applications for food safety - (Peer Reviewed Journal)
Counihan, K.L., Kanrar, S., Tilman, S.M., Gehring, A.G. 2023. Evaluation of long-read sequencing simulators to assess real-world applications for food safety. Foods. 13(1):16. https://doi.org/10.3390/foods13010016.

High-yield and high-throuhput delamination of multilayer MXene via high-pressure homogenization - (Peer Reviewed Journal)
Inman, C.A., Shevchuk, K., Anayee, M., Hammill, B., Lee, J., Saraf, M., Shuck, C., Armstrong, C.M., He, Y., Jin, Z.T., Shekhirev, M., Capobianco Jr, J.A., Gogotsi1, Y. 2023. High-yield and high-throuhput delamination of multilayer MXene via high-pressure homogenization. Chemical Engineering Journal. 475:146089. https://doi.org/10.1016/j.cej.2023.146089.

Complete genome sequence of Campylobacter jejuni BSD5, a multidrug-resistant isolate from a poultry processing facility in the United States - (Peer Reviewed Journal)
He, Y., Reed, S.A., Gunther, N.W., Armstrong, C.M., Capobianco Jr, J.A. 2023. Complete genome sequence of Campylobacter jejuni BSD5, a multidrug-resistant isolate from a poultry processing facility in the United States. Microbiology Resource Announcements. 12(6). https://doi.org/10.1128/mra.00284-23.

Use of a commercial tissue dissociation system to detect Salmonella-contaminated poultry products - (Peer Reviewed Journal)
Armstrong, C.M., He, Y., Chen, C., Counihan, K.L., Lee, J., Reed, S.A., Capobianco Jr, J.A. 2023. Use of a commercial tissue dissociation system to detect Salmonella-contaminated poultry products. Analytical and Bioanalytical Chemistry. https://doi.org/10.1007/s00216-023-04668-w.

Enhancing detection of Listeria monocytogenes in food products using an enzyme - (Peer Reviewed Journal)
Felton, S., Armstrong, C.M., Chen, C., He, Y., Lee, J., Reed, S.A., Akula, N., Walker, S., Berger, B., Capobianco Jr, J.A. 2022. Enhancing detection of Listeria monocytogenes in food products using an enzyme. Food Control. https://doi.org/10.1016/j.foodcont.2022.109445.

Complete genome sequences of multidrug-resistant Campylobacter coli strains YH501, YH503, and YH504 from retail chicken - (Peer Reviewed Journal)
He, Y., Reed, S.A., Yan, X., Zhang, D., Strobaugh Jr, T.P., Capobianco Jr, J.A., Gehring, A.G. 2022. Complete genome sequences of multidrug-resistant Campylobacter coli strains YH501, YH503, and YH504 from retail chicken. Microbiology Resource Announcements. Available online: https://www.researchgate.net/journal/Microbiology-Resource-Announcements-2576-098X. https://doi.org/10.1128%2Fmra.00237-22.