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ARS Home » Plains Area » Clay Center, Nebraska » U.S. Meat Animal Research Center » Genetics and Animal Breeding » People & Locations » Danny Nonneman (Dan)
Danny J Nonneman (Dan)
Genetics and Animal Breeding
Research Molecular Biologist

Phone: (402) 762-4367
Fax: (402) 762-4390

(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)

Projects
Multi-Dimension Phenotyping to Enhance Prediction of Performance in Swine
In-House Appropriated (D)
  Accession Number: 443152

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Ileal epithelial tissue transcript profiles of steers with experimentally induced liver abscesses Reprint Icon - (Peer Reviewed Journal)
Lindholm-Perry, A.K., Keel, B.N., Hales, K.E., Wells, J.E., Kuehn, L.A., Keele, J.W., Crouse, M.S., Nonneman, D.J., Nagaraja, T.G., Lawrence, T.E., Amachawadi, R.G., Carroll, J.A., Burdick Sanchez, N.C., Broadway, P.R. 2024. Ileal epithelial tissue transcript profiles of steers with experimentally induced liver abscesses. Applied Animal Science. 40(3):414-420. https://doi.org/10.15232/aas.2023-02503.
Clustering of multi-tissue transcriptomes in gilts with normal cyclicity or delayed puberty reveals genes related to pubertal development Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Keel, B.N., Nonneman, D.J., Cushman, R.A., Lents, C.A. 2023. Clustering of multi-tissue transcriptomes in gilts with normal cyclicity or delayed puberty reveals genes related to pubertal development. Biology of Reproduction. 110(2):261-274. https://doi.org/10.1093/biolre/ioad145.
Relationships of genomic estimated breeding values for age at puberty, birth weight, and growth during development in normal cyclic and acyclic gilts Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Nonneman, D.J., Rohrer, G.A., Lents, C.A. 2023. Relationships of genomic estimated breeding values for age at puberty, birth weight, and growth during development in normal cyclic and acyclic gilts. Journal of Animal Science. 101. Article skad258. https://doi.org/10.1093/jas/skad258.
gBLUP-GWAS identifies candidate genes, signaling pathways, and putative functional polymorphisms for age at puberty in gilts Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Nonneman, D.J., Snelling, W.M., Rohrer, G.A., Keel, B.N., Lents, C.A. 2023. gBLUP-GWAS identifies candidate genes, signaling pathways, and putative functional polymorphisms for age at puberty in gilts. Journal of Animal Science. Article skad063. https://doi.org/10.1093/jas/skad063.
Improving blood phenomics: ISU station report - (Abstract Only)
Multi-tissue multi-omics approach to investigate genomic factors underlying pubertal phenotypes in gilts - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Keel, B.N., Rohrer, G.A., Snelling, W.M., Lents, C.A. 2023. Multi-tissue multi-omics approach to investigate genomic factors underlying pubertal phenotypes in gilts [abstract]. In: Proceedings of the Plant and Animal Genome Conference, January 13-18, 2023, San Diego, California. Palm 1-2.
Multi clustering of the hypothalamic–pituitary–ovary transcriptome in gilts with normal cyclicity or delayed puberty reveals genes related to puberty - (Abstract Only)
Wijesena, H., Keel, B.N., Nonneman, D.J., Rohrer, G.A., Snelling, W.M., Lents, C.A. 2023. Multi clustering of the hypothalamic–pituitary–ovary transcriptome in gilts with normal cyclicity or delayed puberty reveals genes related to puberty [abstract]. In: Proceedings of the Plant and Animal Genome Conference. January 13-18, 2023, San Diego, California. PE0874.
Functional genomics of reproduction in pigs: Are we there yet? Reprint Icon - (Review Article)
Nonneman, D.J., Lents, C.A. 2022. Functional genomics of reproduction in pigs: Are we there yet?. Molecular Reproduction and Development. 90(7): 436-444. https://doi.org/10.1002/mrd.23625.
Relationship of genomic estimated breeding values for age at puberty, birth weight, and growth in cyclic and anestrus gilts Reprint Icon - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Rohrer, G.A., Lents, C.A. 2022. Relationship of genomic estimated breeding values for age at puberty, birth weight, and growth in cyclic and anestrus gilts [abstract]. Journal of Animal Science. 100(Supplement 3):327. https://doi.org/10.1093/jas/skac247.597.
Genome-wide association for behavioral anestrus in swine - (Abstract Only)
Dam parity structure and body condition during lactation influence piglet growth and gilt sexual maturation through pre-finishing Reprint Icon - (Peer Reviewed Journal)
Rempel, L.A., Keel, B.N., Oliver, W.T., Wells, J.E., Lents, C.A., Nonneman, D.J., Rohrer, G.A. 2022. Dam parity structure and body condition during lactation influence piglet growth and gilt sexual maturation through pre-finishing. Journal of Animal Science. 100(4):1-9. Article skac031. https://doi.org/10.1093/jas/skac031.
Gene expression in the amygdala and hippocampus of cyclic and acyclic gilts Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Nonneman, D.J., Keel, B.N., Lents, C.A. 2022. Gene expression in the amygdala and hippocampus of cyclic and acyclic gilts. Journal of Animal Science. Article skab372. https://doi.org/10.1093/jas/skab372.
Transcriptomic analysis for pork color – The ham halo effect in biceps femoris Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Keel-Mercer, B.N., Lindholm-Perry, A.K., Rohrer, G.A., Wheeler, T.L., Shackelford, S.D., King, D.A. 2022. Transcriptomic analysis for pork color – The ham halo effect in biceps femoris. Meat and Muscle Biology. 6(1):1-8. Article 13050. https://doi.org/10.22175/mmb.13050.
GBLUP-GWAS identifies candidate genes and polymorphisms for age at puberty in gilts - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Snelling, W.M., Rohrer, G.A., Keel, B.N., Lents, C.A. 2021. GBLUP-GWAS identifies candidate genes and polymorphisms for age at puberty in gilts. In proceedings: International Society for Animal Genetics Conference, July 26-30, 2021. Virtual. p. 111. Abstract P320.
Potential functional variants in AHR signaling pathways are associated with age at puberty in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Lents, C.A., Rempel, L.A., Rohrer, G.A. 2021. Potential functional variants in AHR signaling pathways are associated with age at puberty in swine. Animal Genetics. 52(3):284-291. Article 13051. https://doi.org/10.1111/age.13051.
Body weight and growth in normal cyclic and acyclic gilts Reprint Icon - (Abstract Only)
Lents, C.A., Nonneman, D.J. 2021. Body weight and growth in normal cyclic and acyclic gilts [abstract]. Journal of Animal Science. 99 (Supplement 1):140-141. https://doi.org/10.1093/jas/skab054.237.
Potential relationship of the porcine muscle thanatotranscriptome to pork quality - (Abstract Only)
King, D.A., Dickey, A.M., Shackelford, S.D., Wheeler, T.L., Rohrer, G.A., Nonneman, D.J. 2020. Potential relationship of the porcine muscle thanatotranscriptome to pork quality. [Abstract]. International Congress of Meat Science and Technology Proceedings. Poster No. 206.
The Ham Halo condition: Characterization and a possible approach for mitigation Reprint Icon - (Abstract Only)
King, D.A., Shackelford, S.D., Nonneman, D.J., Rohrer, G.A., Wheeler, T.L. 2020. The Ham Halo condition: Characterization and a possible approach for mitigation. Journal of Animal Science. 98(Supplement 4):96. https://doi.org/10.1093/jas/skaa278.176.
Sire variation in the severity of the ham halo condition Reprint Icon - (Peer Reviewed Journal)
King, D.A., Shackelford, S.D., Nonneman, D.J., Rohrer, G.A., Wheeler, T.L. 2020. Sire variation in the severity of the ham halo condition. Meat and Muscle Biology. 4(1). https://doi.org/10.22175/mmb.9743.
An improved pig reference genome sequence to enable pig genetics and genomics research Reprint Icon - (Peer Reviewed Journal)
Warr, A., Affara, N., Aken, B., Beiki, H., Bickhart, D.M., Billis, K., Chow, W., Eory, L., Finlayson, H.A., Flicek, P., Giron, C.G., Griffin, D.K., Hall, R., Hannum, G., Hourlier, T., Howe, K., Hume, D.A., Izuogu, O., Kim, K., Koren, S., Liu, H., Manchanda, N., Martin, F.J., Nonneman, D.J., O'Connor, R.E., Phillippy, A.M., Rohrer, G.A., Rosen, B.D., Rund, L.A., Sargent, C.A., Schook, L.B., Schroeder, S.G., Shwartz, A.S., Skinner, B.M., Talbot, R., Tseng, E., Tuggle, C.K., Watson, M., Smith, T.P., Archibald, A.L. 2020. An improved pig reference genome sequence to enable pig genetics and genomics research. GigaScience. 9(6):giaa051. https://doi.org/10.1093/gigascience/giaa051.
Transcriptome of the amygdala in normal cyclic and acyclic gilts Reprint Icon - (Abstract Only)
Lents, C.A., Nonneman, D.J., Keel, B.N. 2020. Transcriptome of the amygdala in normal cyclic and acyclic gilts [abstract]. Journal of the Endocrine Society. 4(Supplement 1):A659. SUN-242. https://doi.org/10.1210/jendso/bvaa046.1300.
Physiological and genomic insight into neuroendocrine regulation of puberty in gilts Reprint Icon - (Peer Reviewed Journal)
Lents, C.A., Lindo, A.N., Hileman, S.M., Nonneman, D.J. 2020. Physiological and genomic insight into neuroendocrine regulation of puberty in gilts. Domestic Animal Endocrinology. 73. Article 106446. https://doi.org/10.1016/j.domaniend.2020.106446.
The porcine muscle thanatotranscriptome - (Abstract Only)
Nonneman, D.J., Dickey, A.M., King, D.A. 2020. The porcine muscle thanatotranscriptome [abstract]. In: Proceedings of XXVIII Plant and Animal Genome Conference, Swine Workshop. San Diego, CA, 11-15 Jan 2020. W1030.
Developmental and allele-specific methylation patterns in fetal liver of pigs derived from White Composite x Meishan reciprocal crosses - (Abstract Only)
Corbett, R.J., Liu, H., Nonneman, D., Smith, T.P.L., Raney, N.E., Tuggle, C.K., Ernst, C.W. 2020. Developmental and allele-specific methylation patterns in fetal liver of pigs derived from White Composite x Meishan reciprocal crosses [abstract]. In proceedings: Plant and Animal Genome Conference, San Diego, CA, 11-15 Jan 2020. W034. Available: https://plan.core-apps.com/pag_2020/abstract/b96984cc-5afc-4dce-b908-9c79e4ac4e85.
Genome-wide associations for fatty acid composition of pork identifies novel candidate SNP on chromosome 14 - (Abstract Only)
Nonneman, D.J., Clancy, M.D., Rohrer, G.A., Arkfeld, E., Boler, D.D., Dilger, A.C., King, A., Wheeler, T.L., Shackelford, S.D. 2020. Genome-wide associations for fatty acid composition of pork identifies novel candidate SNP on chromosome 14 [abstract]. In proceedings: Plant and Animal Genome Conference XXVIII, San Diego, CA, January 11-15, 2020. Abstract PE0396. Available: https://plan.core-apps.com/pag_2020/abstract/60658e794c2a6d06f3aa20dcfb5c9f80
Pipelines, workflows and virtualization to build institutional informatics capacity - (Abstract Only)
Dickey, A.M., Nonneman, D.J., Freetly, H.C., Workman, A.M., Kuehn, L.A. 2019. Pipelines, workflows and virtualization to build institutional informatics capacity [abstract]. In: Proceedings of Rocky 2019, December 5-7, 2019, Aspen/Snowmass, Colorado. Paper No. P22.
A survey of copy number variation in the porcine genome detected from whole-genome sequence Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Lindholm-Perry, A.K., Oliver, W.T., Rohrer, G.A. 2019. A survey of copy number variation in the porcine genome detected from whole-genome sequence. Frontiers in Genetics. 10:737. https://doi.org/10.3389/fgene.2019.00737.
Evaluation of genotype quality parameters for SowPro90, a new genotyping array for swine Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Rohrer, G.A., Nonneman, D.J., Keel, B.N., Petersen, J.L., Kachman, S.D., Ciobanu, D.C. 2019. Evaluation of genotype quality parameters for SowPro90, a novel genotyping platform for swine. Journal of Animal Science. 97(8):3262-3273. https://doi.org/10.1093/jas/skz185.
A survey of genomic variants in commercial swine germplasm identified from whole-genome sequence - (Abstract Only)
Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data Reprint Icon - (Peer Reviewed Journal)
Beiki, H., Liu, H., Manchanda, N., Nonneman, D.J., Smith, T.P.L., Reecy, J., Tuggle, C. 2019. Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data. BMC Genomics. 20:344-362. https://doi.org/10.1186/s12864-019-5709-y.
From phenotype to gene discovery: A case study of host genetics influencing porcine circovirus 2 susceptibility - (Abstract Only)
Walker, L., Wijesena, H., Sutton, K., Vu, H., Nonneman, D., Smith, T., Plastow, G., Kachman, S., Ciobanu, D. 2019. From phenotype to gene discovery: A case study of host genetics influencing porcine circovirus 2 susceptibility [abstract]. In proceedings: 37th International Society for Animal Genetics (ISAG). 7-12 July 2019, Lleida, Spain. p. 7. Abstract OP25.
Characterization of A-to-I editing events in fetal pig tissues - (Abstract Only)
Corbett, R.J., Funkhouser, S.A., Nonneman, D.J., Smith, T.P.L., Ernst, C.W. 2019. Characterization of A-to-I editing events in fetal pig tissues [abstract]. In Proceedings: 37th International Society for Animal Genetics (ISAG). 7-12 July 2019, Lleida, Spain. pg. 24. Abstract OP86.
Host synaptogyrin-2 facilitates replication of PCV2b - (Abstract Only)
Walker, L., Engle, T., Vu, H., Tosky, E., Nonneman, D., Smith, T., Borza, T., Burkey, T., Plastow, G., Kachman, S., Ciobanu, D. 2019. Host synaptogyrin-2 facilitates replication of PCV2b [abstract]. In proceedings: 37th International Society for Animal Genetics (ISAG). 7-12 July 2019, Lleida, Spain. pg. 119. Abstract P208.
The enigmatic role of host genetics in disease susceptibility: a case study of Porcine circovirus 2 - (Abstract Only)
Walker, L.R., Engle, T.B., Vu, H., Tosky, E.R., Nonneman, D.J., Smith, T.P.L., Borza, T., Burkey, T.E., Plastow, G.S., Kachman, S.D., Ciobanu, D.C. 2019. The enigmatic role of host genetics in disease susceptibility: a case study of Porcine circovirus 2 [abstract]. In: Plant and Animal Genome Conference Proceedings XXVII, 12-16 January 2019, San Diego, CA. pg. 232. W1128. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Cataloguing genetic variants in commercial swine - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2019. Cataloguing genetic variants in commercial swine [abstract]. In: Plant & Animal Genome Conference Proceedings XXVII, 12-16 January 2019, San Diego, CA. pg. 216. W1046. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Fine mapping of QTL associated with age at puberty in gilts using a novel Affymetrix SNP (SowPro90) - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Keel, B.N., Riethoven, J.J., Rohrer, G.A., Kachman, S.D., Ciobanu, D.C. 2019. Fine mapping of QTL associated with age at puberty in gilts using a novel Affymetrix SNP (SowPro90) [abstract]. In: Plant and Animal Genome Conference Proceedings XXVII, 12-16 January 2019, San Diego, CA. pg. 116. PE0404. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-posters.pdf
Functional annotation of the porcine genome and ISAFG update - (Abstract Only)
Tuggle, C.K., Zhou, H., Ernst, C.W., Loving, C.L., Koltes, J.E., Reecy, J.M., Ross, P.J., Nonneman, D.J., Smith, T.P.L., Steibel, J.P., Huang, W. 2019. Functional annotation of the porcine genome and ISAFG update [abstract]. In: Plant and Animal Genome Conference XXVII Proceedings, 12-16 Jan 2019, San Diego, CA. pg. 96. W448. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Transcriptome and genome-wide histone modifications in swine fetal liver - (Abstract Only)
Niu, B., Liu, H., Nonneman, D.J., Tuggle, C.K. 2019. Transcriptome and genome-wide histone modifications in swine fetal liver [abstract]. Plant and Animal Genome Conference Proceedings, San Diego, CA, 12-16 January 2019. pg. 212, PE0420. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-posters.pdf
Host genetics influences replication of porcine circovirus 2b - (Abstract Only)
Walker, L.R., Engle, T.B., Vu, H., Tosky, E.R., Nonneman, D.J., Smith, T.P.L., Borza, T., Burkey, T.E., Plastow, G.S., Kachman, S.D., Ciobanu, D.C. 2019. Host genetics influences replication of porcine circovirus 2b [abstract]. In: Plant and Animal Genome Conference XXVII Proceedings, 12-16 January 2019, San Diego, CA. pg. 233. W1136. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Deciphering the dynamics of porcine circovirus associated diseases using gene silencing and editing - (Abstract Only)
Walker, L., Engle, T., Vu, H., Tosky, E., Nonneman, D.J., Smith, T.P.L., Borza, T., Burkey, T., Plastow, G.S., Kachman, S.D., Ciobanu, D.C. 2019. Deciphering the dynamics of porcine circovirus associated diseases using gene silencing and editing [abstract]. In: Plant and Animal Genome Conference Proceedings XXVII, 12-16 Jan. 2019, San Diego, CA. pg. 216, W1045. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Porcine single nucleotide polymorphisms and their functional effect: an update Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Lindholm-Perry, A.K., Oliver, W.T., Rohrer, G.A. 2018. Porcine single nucleotide polymorphisms and their functional effect: an update. BMC Research Notes. 11:860. https://doi.org/10.1186/s13104-018-3973-6.
Transcriptome profiling of olfactory epithelium in normal cycling and acyclic gilts Reprint Icon - (Abstract Only)
Nonneman, D.J., Dickey, A.M., Lents, C.A. 2019. Transcriptome profiling of olfactory epithelium in normal cycling and acyclic gilts [abstract]. Journal of Animal Science. 97(Supplement 2):125. Abstract 213. https://doi.org/10.1093/jas/skz122.222.
Synaptogyrin-2 influences replication of porcine circovirus 2 Reprint Icon - (Peer Reviewed Journal)
Walker, L.R., Engle, T.B., Vu, H., Tosky, E.R., Nonneman, D.J., Smith, T.P.L., Borza, T., Burkey, T.E., Plastow, G.S., Kachman, S.D., Ciobanu, D.C. 2018. Synaptogyrin-2 influences replication of porcine circovirus 2. PLoS Genetics. 14(10):e1007750. https://doi.org/10.1371/journal.pgen.1007750.
Energy balance affects pulsatile secretion of luteinizing hormone from the adenohypophesis and expression of neurokinin B in the hypothalamus of ovariectomized gilts Reprint Icon - (Peer Reviewed Journal)
Thorson, J.F., Prezotto, L.D., Adams, H., Petersen, S.L., Clapper, J.A., Wright, E.C., Oliver, W.T., Freking, B.A., Foote, A.P., Berry, E.D., Nonneman, D.J., Lents, C.A. 2018. Energy balance affects pulsatile secretion of luteinizing hormone from the adenohypophesis and expression of neurokinin B in the hypothalamus of ovariectomized gilts. Biology of Reproduction. 99(2):433-445. https://doi.org/10.1093/biolre/ioy069.
Genome-wide association of myoglobin concentrations in pork loins Reprint Icon - (Peer Reviewed Journal)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Nonneman, D.J., Keel, B.N., Rohrer, G.A. 2018. Genome-wide association of myoglobin concentrations in pork loins. Meat and Muscle Biology. 2(1):189-196. https://doi.org/10.22175/mmb2017.08.0042.
Nutritional regulation of LH secretion in gilts: Hypothalamic expression of kisspeptin and neurokinin B - (Abstract Only)
Lents, C.A., Thorsen, J.F., Adams, H., Petersen, S.L., Prezotto, L.D., Berry, E.D., Nonneman, D.J. 2018. Nutritional regulation of LH secretion in gilts: Hypothalamic expression of kisspeptin and neurokinin B [abstract]. Journal of Animal Science. 96(Supplement 2):211-212. Abstract 394.
Characterization of plasma metabolites at late gestation and lactation in early parity sows on production and post-weaning reproductive performance Reprint Icon - (Peer Reviewed Journal)
Rempel, L.A., Vallet, J.L., Nonneman, D.J. 2018. Characterization of plasma metabolites at late gestation and lactation in early parity sows on production and post-weaning reproductive performance. Journal of Animal Science. 96(2):521-531. https://doi.org/10.1093/jas/skx066.
Transcriptome analysis for pork color – the ham halo effect in biceps femoris - (Abstract Only)
Nonneman, D.J., Keel, B.N., King, D.A. 2018. Transcriptome analysis for pork color – the ham halo effect in biceps femoris [abstract]. Journal of Animal Science. 96(Supplement 2):102. Abstract 192.
A survey of copy number variation in the porcine genome detected from whole-genome sequence - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2018. A survey of copy number variation in the porcine genome detected from whole-genome sequence [abstract]. Journal of Animal Science. 96(Supplement 2):17-18. Abstract 32.
Additional annotation of the pig transcriptome using integrated Iso-seq and Illumina RNA-seq analysis - (Abstract Only)
Beiki, H., Liu, H., Huang, J., Manchanda, N., Nonneman, D.J., Smith, T.P.L., Tuggle, C.K. 2018. Additional annotation of the pig transcriptome using integrated Iso-seq and Illumina RNA-seq analysis. [abstract] In proceedings: Plant and Animal Genome Conference XXVI, San Diego, CA, 13-17 Jan 2018. Poster abstract P0439. Available: pag.confex.com/pag/xxvi/meetingapp.cgi/paper/30999.
Genome-wide association of myoglobin concentrations in pork loins - (Abstract Only)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Cassady, J.P., Nonneman, D.J., Rohrer, G.A. 2017. Genome-wide association of myoglobin concentrations in pork loins. [abstract] In proceedings: South Dakota State University Swine Day Proceedings. Brookings, SD. Oct. 11, 2017. pg. 12.
A high-quality annotated transcriptome of swine peripheral blood Reprint Icon - (Peer Reviewed Journal)
Liu, H., Smith, T.P., Nonneman, D.J., Dekkers, J.C., Tuggle, C.K. 2017. A high-quality annotated transcriptome of swine peripheral blood. BMC Genomics. 18:479.. https://doi.org/10.1186/s12864-017-3863-7.
Polymorphism in the intron 20 of porcine O-linked N-acetylglucosamine transferase Reprint Icon - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Kim, D., Shin, S., Rohrer, G.A. 2017. Polymorphism in the intron 20 of porcine O-linked N-acetylglucosamine transferase. Asian-Australasian Journal of Animal Sciences. 30(8):1086-1092. doi:10.5713/ajas.17.0143.
Genomics and metabolomics of post-weaning return to estrus Reprint Icon - (Peer Reviewed Journal)
Rempel, L.A., Rohrer, G.A., Nonneman, D.J. 2017. Genomics and metabolomics of post-weaning return to estrus. Molecular Reproduction and Development. 84(9):987-993. https://doi.org/10.1002/mrd.22820.
A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2017. A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome. Animal Genetics. 48(4):404-411. doi:10.1111/age.12557.
Relationship of neuropeptide FF receptors with pubertal maturation of gilts Reprint Icon - (Peer Reviewed Journal)
Thorson, J.F., Heidorn, N.L., Ryu, V., Czaja, K., Nonneman, D.J., Barb, C.R., Hausman, G.J., Rohrer, G.A., Prezotto, L.D., McCosh, R.B., Wright-Johnson, E.C., White, B.R., Freking, B.A., Oliver, W.T., Hileman, S.M., Lents, C.A. 2017. Relationship of neuropeptide FF receptors with pubertal maturation of gilts. Biology of Reproduction. 96(3):617-634. doi:10.1095/biolreprod.116.144998
USMARC update on swine reproduction research - (Abstract Only)
Nonneman, D.J., Lents, C.A., Keel, B.N., Rohrer, G.A. 2017. USMARC update on swine reproduction research. Plant and Animal Genome Conference. [Abstract] In Proceedings: Plant and Animal Genome XXV Conference, Jan. 14-18, 2017. San Diego, CA. W914.
Evaluation of functional variation in candidate genes for pork quality - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Kalbfleisch, T.S., Shackelford, S.D., King, D.A., Wheeler, T.L. 2017. Evaluation of functional variation in candidate genes for pork quality [abstract]. Journal of Animal Science. 95(supplement 2):19-20. https://doi.org/10.2527/asasmw.2017.041.
A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2017. A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome [abstract]. Journal of Animal Science 95(Supplement 1):17-18. https://:doi.org/10.2527/asasmw.2017.037.
Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side Reprint Icon - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J. 2017. Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side. Genetics Selection Evolution. 49:4. doi:10.1186/s12711-016-0282-1.
Swine transcriptome characterization by combined Iso-Seq and RNA-seq for annotating the emerging long read-based reference genome - (Abstract Only)
Liu, H., Manchanda, N., Nonneman, D.J., Smith, T.P., Tuggle, C. 2017. Swine transcriptome characterization by combined Iso-Seq and RNA-seq for annotating the emerging long read-based reference genome [abstract]. In proceedings: Plant and Animal Genome Conference, Jan. 14-18, 2017, San Diego, CA. P1162.
Genetic improvement of sow lifetime productivity - (Abstract Only)
Rohrer, G.A., Cross, A.J., Lents, C.A., Miles, J.R., Nonneman, D.J., Rempel, L.A. 2017. Genetic improvement of sow lifetime productivity. [Abstract] In proceedings: Midwestern Section of the American Society of Animal Science. March 13-15, 2017. Omaha, NE. Journal of Animal Science Supplement 95(Suppl 2):11-12 doi:10.2527/asasmw.2017.026.
Genome-wide association of myoglobin concentrations in pork loins - (Abstract Only)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Cassady, J.P., Nonneman, D.J., Rohrer, G.A. 2017. Genome-wide association of myoglobin concentrations in pork loins [abstact]. Journal of Animal Science. 95(Suppl2):20. doi:10.2527/asasmw.2017/042.
Exploiting long read sequencing technologies to establish high quality highly contiguous pig reference genome assemblies - (Abstract Only)
Warr, A., Hall, R., Kim, K., Tseng, E., Koren, S., Phillippy, A.M., Bickhart, D.M., Rosen, B.D., Schroeder, S.G., Hume, D.A., Talbot, R., Rund, L., Schook, L.B., Chow, W., Howe, K., Nonneman, D.J., Rohrer, G.A., Putnam, N., Green, E., Watson, M., Smith, T.P., Archibald, A.L. 2017. Exploiting long read sequencing technologies to establish high quality highly contiguous pig reference genome assemblies [abstract]. Plant and Animal Genome Conference XX, January 14-18, 2017, San Diego, California. Paper No. 25025.
A GWAS of teat number in pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J. 2016. A GWAS of teat number in pigs [abstract]. International Society for Animal Genetics (35th ISAG). Abstract Book. p. 131-132 (Abstract # P5033).
Expression of the putative gonadotropin-inhibitory hormone receptor, NPFFR1, in the anterior pituitary gland of the gilt is affected by age and sexual maturation - (Abstract Only)
Lents, C.A., Thorson, J.F., Nonneman, D.J. 2016. Expression of the putative gonadotropin-inhibitory hormone receptor, NPFFR1, in the anterior pituitary gland of the gilt is affected by age and sexual maturation [abstract]. Journal of Animal Science Supplement. 94 (E-Supplement 5):527 (Abstract # 1120).
A comprehensive porcine blood transcriptome - (Abstract Only)
Liu, H., Smith, T.P.L., Nonneman, D.J., Dekkers, J.C.M., Tuggle, C.K. 2016. A comprehensive porcine blood transcriptome [abstract]. In: Proceedings of 35th International Society for Animal Genetics (ISAG) Conference, 23-17 July 2016, Salt Lake City, UT. pg. 69. P3033. Available: https://www.isag.us/docs/Proceedings/ISAG_Proceedings_2016.pdf
Genome-wide association and identification of candidate genes for age at puberty in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Schneider, J.F., Lents, C.A., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2016. Genome-wide association and identification of candidate genes for age at puberty in swine. BMC Genetics. 17(1):50.
Effects of neonatal litter size and age on ovarian gene expression and follicular development in gilts - (Abstract Only)
McClure, M.W., Cushman, R.A., Nonneman, D.J., Lents, C.A. 2016. Effects of neonatal litter size and age on ovarian gene expression and follicular development in gilts [abstract]. Journal of Animal Science. 94(Supplement 2):184 (Abstract #403).
Potential functional variants associated with age at puberty in a validation population of swine - (Abstract Only)
Nonneman, D.J., Lents, C.A., Kalbfleisch, T.S., Vallet, J.L., Rohrer, G.A. 2016. Potential functional variants associated with age at puberty in a validation population of swine [abstract]. Plant and Animal Genome Conference Proceedings. XXIV Conference:Abstract #P0619.
Investigation and validation of the role of a QTL on SSC12 in PCV2b viremia - (Abstract Only)
Tosky, E., Smith, T.P.L., Engle, T., Davis, E., Moural, T., Nonneman, D., Chin, J., Burkey, T., Plastow, G.S., Kachman, S.D., Ciobanu, D.C. 2016. Investigation and validation of the role of a QTL on SSC12 in PCV2b viremia [abstract]. Plant and Animal Genome XXIV Conference Proceedings. Abstract #P0638.
Do you really know where this SNP goes? - (Abstract Only)
Rohrer, G.A., Nonneman, D., Schroeder, S.G., Chin, J., Koren, S., Phillippy, A., Green, R., Putnam, N., Smith, T.P.L. 2016. Do you really know where this SNP goes? [abstract] Plant and Animal Genome XXIV Conference Proceedings. Abstract #W909.
Development of resources and tools for mapping genetic sources of phenotypic variation - (Abstract Only)
Ciobanu, D.C., Tosky, E., Olson, S., Trenhaile, M., Lents, C.A., Smith, T.P.L., Nonneman, D., Rohrer, G.A., Chin, J., Miller, P.S., Burkey, T., Spangler, M.L., Riethoven, J.-J., Plastow, G.S., Kachman, S.D. 2016. Development of resources and tools for mapping genetic sources of phenotypic variation [abstract]. Plant and Animal Genome XXIV Conference Proceedings. Abstract #W914.
Litter-of-origin trait effects on gilt development Reprint Icon - (Peer Reviewed Journal)
Vallet, J.L., Calderón-Díaz, J.A., Stalder, K.J., Phillips, C., Cushman, R.A., Miles, J.R., Rempel, L.A., Rohrer, G.A., Lents, C.A., Freking, B.A., Nonneman, D.J. 2016. Litter-of-origin trait effects on gilt development. Journal of Animal Science. 94(1):96-105.
A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL Reprint Icon - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J., Wiedmann, R.T., Schneider, J.F. 2015. A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL. BMC Genetics. 16(1):129.
Implementing meta-analysis from genome-wide association studies for pork quality traits Reprint Icon - (Peer Reviewed Journal)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, D.A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2015. Implementing meta-analysis from genome-wide association studies for pork quality traits. Journal of Animal Science. 93(12):5607-5617.
Meta-analysis of genome-wide association from genomic prediction models - (Peer Reviewed Journal)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2016. Meta-analysis of genome-wide association from genomic prediction models. Animal Genetics. 47(1):36-48.
Potential contribution of genomics and biotechnology in animal production - (Book / Chapter)
Casas, E., Montaldo, H.H., Nonneman, D.J., Poli, M.A. 2015. Potential contribution of genomics and biotechnology in animal production. In: Dominguez, R.N., Valverde, R.R., Rivera, S.F., Febres, O.A., Winder, M.G., Munoz T.E., editors. Livestock in Latin America and the Caribbean: Alternatives for the sustainable, inclusive and competitive production of animal-derived foods. 1st edition. Guadalajara, Mexico: Printing Arts Mexico. p. 761-788.
Genome-wide copy number variations using SNP genotyping in a mixed breed swine population Reprint Icon - (Peer Reviewed Journal)
Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2015. Genome-wide copy number variations using SNP genotyping in a mixed breed swine population. PLoS One. 10(7):e0133529. DOI: 10.1371/journal.pone.0133529.
Measurements of body composition during late gestation and lactation in first and second parity sows and its relationship to piglet production and post-weaning reproductive performance - (Peer Reviewed Journal)
Rempel, L.A., Vallet, J.L., Lents, C.A., Nonneman, D.J. 2015. Measurements of body composition during late gestation and lactation in first and second parity sows and its relationship to piglet production and post-weaning reproductive performance. Livestock Science. 178:289-295.
Porcine models of muscular dystrophy Reprint Icon - (Review Article)
Selsby, J.T., Ross, J.W., Nonneman, D., Hollinger, K. 2015. Porcine models of muscular dystrophy. ILAR Journal. 56(1):116-126.
Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age Reprint Icon - (Peer Reviewed Journal)
Calderón Díaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age. Journal of Animal Science. 93(7):3521-3527.
Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age - (Abstract Only)
Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C.E., DeDecker, A.E., Foxcroft, G., Stalder, K. 2015. Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age [abstract]. Journal of Animal Science. 93(Supplement 2):81 (Abstract #180).
Relationships between day one piglet serum immunoglobulin immunocrit and subsequent growth, puberty attainment, litter size, and lactation performance Reprint Icon - (Peer Reviewed Journal)
Vallet, J.L., Miles, J.R., Rempel, L.A., Nonneman, D.J., Lents, C.A. 2015. Relationships between day one piglet serum immunoglobulin immunocrit and subsequent growth, puberty attainment, litter size, and lactation performance. Journal of Animal Science. 93(6):2722-2729.
Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits - (Research Technical Update)
Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits. Iowa State University Animal Industry Report. AS 661(ASL R3022). Available: https://lib.dr.iastate.edu/asn_air/vol661/iss1/85.
Litter of origin effects on gilt development in a commercial setting - (Abstract Only)
Vallet, J.L., Calderon-Diaz, J.A., Stalder, K.J., Phillips, C.E., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Lents, C.A., Nonneman, D., Rohrer, G.A., Freking, B.A., Cushman, R.A. 2015. Litter of origin effects on gilt development in a commercial setting [abstract]. Journal of Animal Science. 93(Supplement 2):79-80 (Abstract #177).
Research on gilt first estrus and pubertal development at USMARC - (Abstract Only)
Nonneman, D., Lents, C.A., Schneider, J.F., Vallet, J.L., Rohrer, G.A. 2015. Research on gilt first estrus and pubertal development at USMARC [abstract]. Plant and Animal Genome XXIII Conference Proceedings. Abstract #W827.
A study of vertebra number in pigs confirms the effect of vertnin and reveals additional QTL - (Abstract Only)
Rohrer, G.A., Nonneman, D., Schneider, J.F. 2015. A study of vertebra number in pigs confirms the effect of vertnin and reveals additional QTL [abstract]. Plant and Animal Genome XXIII Conference Proceedings. Abstract #P0370.
Methods for meta-analysis of genome-wide association studies - (Abstract Only)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Methods for meta-analysis of Genome-wide association studies [abstract]. Revista Argentina de Producción Animal. 34 (Supplement 1):83 (Abstract # GM 7).
Implementing Meta-analysis for genome-wide association studies of pork quality traits - (Abstract Only)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Implementing Meta-analysis for genome-wide association studies of pork quality traits [abstract]. Revista Argentina de Producción Animal. 34 (Supplement 1):82 (Abstract # GM 6).
Meta-analysis of genome wide association studies for pork quality traits - (Proceedings)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Canter, R.J.C., Steibel, J.P. 2014. Meta-analysis of genome wide association studies for pork quality traits. In: Proceedings of 10th World Congress of Genetics Applied to Livestock Production, August 17-22, 2014, Vancouver, British Columbia, Canada. 3 pp.
Optimal dietary energy and protein for the development of gilts - NPB #12-209 - (Research Technical Update)
Vallet, J., Calderon, J., Stalder, K., Phillips, C., Bradley, G., Miles, J., Rempel, L., Lents, C., Freking, B., Rohrer, G., Nonneman, D., Cushman, R. 2014. Optimal dietary energy and protein for the development of gilts - NPB #12-209. National Pork Board. Available: http://research.pork.org/FileLibrary/ResearchDocuments/12-209-Vallet-USDA.pdf.
Genomewide association and identification of candidate genes for ovulation rate in swine - (Peer Reviewed Journal)
Schneider, J.F., Nonneman, D.J., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2014. Genomewide association and identification of candidate genes for ovulation rate in swine. Journal of Animal Science. 92(9):3792-3803.
Dystrophin deficiency-induced changes in porcine skeletal muscle - (Proceedings)
Nonneman, D., Rohrer, G., Ross, J.W., Hollinger, K., Selsby, J.T. 2014. Dystrophin deficiency-induced changes in porcine skeletal muscle. Proceedings of American Meat Science Association 67th Annual Reciprocal Meat Conference, June 15-18, 2014, Madison, Wisconsin. 4 pp. http://www.meatscience.org/publications-resources/rmc-proceedings
Development of rabbit monoclonal antibodies for detection of alpha-dystroglycan in normal and dystrophic tissue Reprint Icon - (Peer Reviewed Journal)
Fortunato, M.J., Ball, C.E., Hollinger, K., Patel, N.B., Modi, J.N., Rajasekaran, V., Nonneman, D.J., Ross, J.W., Kennedy, E.J., Selsby, J.T., Beedle, A.M. 2014. Development of rabbit monoclonal antibodies for detection of alpha-dystroglycan in normal and dystrophic tissue. PLoS One. 9(5):e97567.
Meta-analysis genomewide association of pork quality traits: ultimate pH and shear force - (Abstract Only)
Bernal Rubio, Y.L., Gualdron Duarte, J.L., Bates, R.0., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Meta-analysis genomewide association of pork quality traits: ultimate pH and shear force [abstract]. Journal of Animal Science. 92(Supplement 2):11-12 (Abstract #26).
Dystrophin insufficiency causes selective muscle histopathology and loss of dystrophin-glycoprotein complex assembly in pig skeletal muscle Reprint Icon - (Peer Reviewed Journal)
Hollinger, K., Yang, C.X., Montz, R.E., Nonneman, D., Ross, J.W., Selsby, J.T. 2014. Dystrophin insufficiency causes selective muscle histopathology and loss of dystrophin-glycoprotein complex assembly in pig skeletal muscle. Journal of Federation of American Societies for Experimental Biology. 28(4):1600-1609.
Validation of QTL in commercial-type pigs at USMARC - (Abstract Only)
Rohrer, G.A., Wiedmann, R.T., Schneider, J.F., Nonneman, D. 2014. Validation of QTL in commercial-type pigs at USMARC [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #W795.
Dissection of two QTL on SSC2 identifies candidate genes for ovulation rate in swine - (Abstract Only)
Nonneman, D., Schneider, J.F., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2014. Dissection of two QTL on SSC2 identifies candidate genes for ovulation rate in swine [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #P596.
Discovery of 14.6 million SNP in a mixed breed swine population - (Abstract Only)
Wiedmann, R.T., Nonneman, D., Rohrer, G.A. 2014. Discovery of 14.6 million SNP in a mixed breed swine population [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #P584.
Genome-wide association with delayed puberty in swine - (Peer Reviewed Journal)
Nonneman, D., Lents, C., Rohrer, G., Rempel, L., Vallet, J. 2014. Genome-wide association with delayed puberty in swine. Animal Genetics. 45(1):130-132.
Effects of nesfatin-1 on food intake and LH secretion in prepubertal gilts and genomic association of the porcine NUCB2 gene with growth traits Reprint Icon - (Peer Reviewed Journal)
Lents, C.A., Barb, C.R., Hausman, G.J., Nonneman, D., Heidorn, N.L., Cisse, R.S., Azain, M.J. 2013. Effects of nesfatin-1 on food intake and LH secretion in prepubertal gilts and genomic association of the porcine NUCB2 gene with growth traits. Domestic Animal Endocrinology. 45(2):89-97.
Incorporation of genetic technologies associated with applied reproductive technologies to enhance world food production - (Book / Chapter)
Cushman, R.A., McDaneld, T.G., Kuehn, L.A., Snelling, W.M., Nonneman, D. 2014. Incorporation of genetic technologies associated with applied reproductive technologies to enhance world food production. In: Lamb, G.C., DiLorenzo, N., editors. Current and Future Reproduction Technologies and World Food Production. Advances in Experimental Medicine and Biology. New York, NY: Springer. p. 77-96. DOI: 10.1007/978-1-4614-8887-3.
Genome-wide association of meat quality traits and tenderness in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Shackelford, S.D., King, D.A., Wheeler, T.L., Wiedmann, R.T., Snelling, W.M., Rohrer, G.A. 2013. Genome-wide association of meat quality traits and tenderness in swine. Journal of Animal Science. 91(9):4043-4050.
Characterization of a novel porcine stress syndrome - (Proceedings)
Rohrer, G.A., Brown-Brandl, T.M., Nonneman, D.J. 2014. Characterization of a novel porcine stress syndrome [PowerPoint]. In Proceedings: National Swine Improvement Federation Conference and Annual Meeting, December 1-2, 2011, Lincoln, Nebraska. NSIF Volume 36. Available: http://www.nsif.com/Conferences/2011/pdf/Characterization%20of%20a%20novel%20porcine%20stress%20syndrome.pdf
Dystrophin insufficiency causes a Becker muscular dystrophy-like phenotype in swine - (Abstract Only)
Hollinger, K., Yang, C.-X., Ross, J.W., Rohrer, G.A., Nonneman, D., Selsby, J.T. 2013. Dystrophin insufficiency causes a Becker muscular dystrophy-like phenotype in swine [abstract]. Journal of Federation of American Societies for Experimental Biology. 27:1147.6.
The relationship of plasma urea nitrogen with growth traits and age at first estrus in gilts - (Peer Reviewed Journal)
Lents, C.A., Rempel, L.A., Klindt, J., Wise, T., Nonneman, D., Freking, B.A. 2013. The relationship of plasma urea nitrogen with growth traits and age at first estrus in gilts. Journal of Animal Science. 91(7):3137-3142.
Relationships of birth weight traits with age at first estrus and number of ovulations in Landrace-Duroc-Yorkshire gilts - (Abstract Only)
Lents, C.A., Rempel, L.A., Wise, T., Nonneman, D. 2013. Relationships of birth weight traits with age at first estrus and number of ovulations in Landrace-Duroc-Yorkshire gilts. Journal of Animal Science. 91 (E-Supplement 2):591 (Abstract #TH339).
Abundance of total genomic 5-methylcytosine and 5-hydroxymethylcytosine in different pig tissues - (Abstract Only)
Freking, B.A., Nonneman, D.J. 2013. Abundance of total genomic 5-methylcytosine and 5-hydroxymethylcytosine in different pig tissues. Journal of Animal Science. 91 (E-Supplement 2):537 (Abstract #TH185).
Identification of an ionotropic glutamate receptor AMPA1/GRIA1 polymorphism in crossbred beef cows differing in fertility - (Peer Reviewed Journal)
Cushman, R.A., Miles, J.R., Rempel, L.A., McDaneld, T.G., Kuehn, L.A., Chitko-McKown, C.G., Nonneman, D., Echternkamp, S.E. 2013. Identification of an ionotropic glutamate receptor AMPA1/GRIA1 polymorphism in crossbred beef cows differing in fertility. Journal of Animal Science. 91(6):2640-2646.
Differences in X-chromosome transcriptional activity and cholesterol metabolism between placentae from swine breeds from asian and western origins - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S.Q., Hardison, N.E., Motsinger-Reif, A.A., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2013. Differences in X-chromosome transcriptional activity and cholesterol metabolism between placentae from swine breeds from Asian and Western origins. PLoS One. 8(1):e55345.
Genome-wide association identifies candidate genes for ovulation rate in swine - (Abstract Only)
Nonneman, D., Schneider, J., Wiedmann, R., Vallet, J., Rohrer, G. 2013. Genome-wide association identifies candidate genes for ovulation rate in swine [abstract]. Journal of Animal Science. 91 (Supplement 2):64 (Abstract #O191).
Use of single nucleotide polymorphisms (SNP) to fine-map quantitative trait loci (QTL) in swine - (Abstract Only)
Rohrer, G.A., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Nonneman, D. 2013. Use of single nucleotide polymorphisms (SNP) to fine-map quantitative trait loci (QTL) in swine [abstract]. Plant and Animal Genome XXI Conference Proceedings. Abstract #W047.
Genome-wide association of porcine lung lesions using DNA pooling - (Abstract Only)
Nonneman, D., Jones, S.A., Shackelford, S.D., Keele, J.W. 2013. Genome-wide association of porcine lung lesions using DNA pooling [abstract]. Plant and Animal Genome XXI Conference Proceedings. Abstract #P0594.
A defect in dystrophin causes a novel porcine stress syndrome - (Peer Reviewed Journal)
Nonneman, D.J., Brown-Brandl, T., Jones, S.A., Wiedmann, R.T., Rohrer, G.A. 2012. A defect in dystrophin causes a novel porcine stress syndrome. Biomed Central (BMC) Genomics. 13:233.
Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J., Miller, R.K., Zerby, H., Moeller, S.J. 2012. Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs. Meat Science. 92(4):511-518.
Genome-wide association study of swine farrowing traits. Part II: Bayesian analysis of marker data - (Peer Reviewed Journal)
Schneider, J.F., Rempel, L.A., Snelling, W.M., Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2012. Genome-wide association study of swine farrowing traits. Part II: Bayesian analysis of marker data. Journal of Animal Science. 90(10):3360-3367.
Genome wide association study of age at puberty in swine - (Abstract Only)
Schneider, J.F., Nonneman, D.J., Wiedmann, R.T., Rohrer, G.A. 2012. Genome-wide association study of age at puberty in swine [abstract]. Journal of Animal Science. 90 (Supplement 3):19 (Abstract #M41).
Analysis of copy number variations among cattle breeds - (Abstract Only)
Liu, G., Hou, Y., Zhu, B., Cardone, M.F., Jiang, L., Cellamare, A., Mitra, A., Alexander, L.J., Coutinho, L.L., Gasbarre, L.C., Li, R.W., Matukumalli, L.K., Nonneman, D.J., Regitano, L.C., Smith, T.P., Song, J., Sonstegard, T.S., Van Tassell, C.P., Ventura, M., Eichler, E.E., Mcdaneld, T.G., Keele, J.W. 2012. Analysis of copy number variations among cattle breeds. [abstract] CONFERENCE ON THE BIOLOGY OF GENOMES. P. 182.
Genome-wide association of a novel porcine stress-syndrome to dystrophin - (Abstract Only)
Nonneman, D., Brown Brandl, T., Jones, S.A., Wiedmann, R.T., Rohrer, G.A. 2012. Genome-wide association of a novel porcine stress-syndrome to dystrophin [abstract]. Plant and Animal Genome XX Conference Proceedings. Abstract #W696.
Polymorphism within thyroid hormone responsive (THRSP) associated with weaning-to-oestrus interval in swine - (Peer Reviewed Journal)
Rempel, L.A., Nonneman, D.J., Rohrer, G.A. 2012. Polymorphism within thyroid hormone responsive (THRSP) associated with weaning-to-oestrus interval in swine. Animal Genetics. 43(3):364-365.
Current genetic technologies to improve efficiency of livestock production - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Rempel, L.A., Lents, C.A., Vallet, J.L. 2011. Current genetic technologies to improve efficiency of livestock production [abstract]. Biology of Reproduction. 85 (1 Supplement):83 (Abstract # 107).
Identification of genomic regions associated with cryptorchidism in pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Wiedmann, R.T. 2011. Identification of genomic regions associated with cryptorchidism in pigs. Proc., Swine in Biomedical Research Conference. p. 37-38.
Four genes located on a SSC2 meat quality QTL region are associated with different meat quality traits in Landrace x Chinese-European crossbred population - (Peer Reviewed Journal)
Cepica, S., Ovilo, C., Masopust, M., Knoll, A., Fernandez, A., Lopez, A., Rohrer, G.A., Nonneman, D. 2012. Four genes located on a SSC2 meat quality QTL region are associated with different meat quality traits in Landrace x Chinese-European crossbred population. Animal Genetics. 43(3):333-336.
Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population - (Peer Reviewed Journal)
Rempel, L.A., Freking, B.A., Miles, J.R., Nonneman, D.J., Rohrer, G.A., Schneider, J.F., Vallet, J.L. 2011. Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population. Frontiers in Livestock Genomics. 2:20.
Validation and fine mapping of a QTL for ovulation rate on swine chromosome 3 - (Peer Reviewed Journal)
Mousel, M.R., Leymaster, K.A., Christenson, R.K., Nonneman, D.J., Rohrer, G.A. 2012. Validation and fine mapping of a QTL for ovulation rate on swine chromosome 3. Animal Genetics. 43(2):220-224.
Predictive markers in calpastatin for tenderness in commercial pig populations - (Peer Reviewed Journal)
Nonneman, D.J., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Rohrer, G.A., Bierman, C.D., Schneider, J.F., Miller, R.K., Zerby, H., Moeller, S.J. 2011. Predictive markers in calpastatin for tenderness in commercial pig populations. Journal of Animal Science. 89:2663-2672.
Genomic regions associated with kyphosis in swine - (Peer Reviewed Journal)
Lindholm-Perry, A.K., Rohrer, G.A., Kuehn, L.A., Keele, J.W., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Nonneman, D.J. 2010. Genomic regions associated with kyphosis in swine. BMC Genetics. 11:112.
Genome-wide associations for age at puberty in a Duroc-Landrace-Yorkshire swine population - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Rempel, L.A., Wiedmann, R.T., Vallet, J.L. 2011. Genome-wide associations for age at puberty in a Duroc-Landrace-Yorkshire swine population. Plant and Animal Genome Conference Proceedings. Poster #P609.
QTL associations for weaning-to-estrus interval in a Landrace-Duroc-Yorkshire swine population - (Abstract Only)
Rempel, L.A., Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2011. QTL associations for weaning-to-estrus interval in a Landrace-Duroc-Yorkshire swine population [abstract]. Plant and Animal Genome Conference Proceedings. (XIX Conference):Abstract P607.
Genome-wide association of a novel porcine stress-syndrome and isoflurane sensitivity to dystrophin - (Abstract Only)
Nonneman, D.J., Brown Brandl, T.M., Jones, S., Rohrer, G.A. 2010. Genome-wide association of a novel porcine stress-syndrome and isoflurane sensitivity to dystrophin. Journal of Animal Science. 88(ESuppl. 2):II Abstract #LB5.
Molecular cloning of porcine chemokine CXC motif ligand 2 (CXCL2) and mapping to the SSC8 - (Abstract Only)
Kim, J.G., Rohrer, G.A., Nonneman, D., Vallet, J.L. 2010. Molecular cloning of porcine chemokine CXC motif ligand 2 (CXCL2) and mapping to the SSC8 [abstract]. Biology of Reproduction. 83 (Special Issue):79 (Abstract # 351).
Metabolic Measurements in the Sow and Relationship to Post-Weaning Reproductive Performance - (Abstract Only)
Rempel, L.A., Vallet, J.L., Nonneman, D.J. 2010. Metabolic Measurements in the Sow and Relationship to Post-Weaning Reproductive Performance [abstract]. Journal of Animal Science. 88 (E-Supplement 2):112-113. (Abstract #M293).
Analysis of copy number variations reveals differences among cattle breeds - (Peer Reviewed Journal)
Liu, G., Hou, Y., Zhu, B., Cardone, M.F., Jiang, L., Cellamare, A., Mitra, A., Alexander, L.J., Coutinho, L.L., Gasbarre, L.C., Heaton, M.P., Li, R.W., Matukumalli, L.K., Nonneman, D.J., De A Regitano, L.C., Smith, T.P., Song, J., Sonstegard, T.S., Van Tassell, C.P., Eichler, E.E., Mcdaneld, T.G., Keele, J.W. 2010. Analysis of copy number variations among cattle breeds. Genome Research. 20:693-703.
Association of Allelic Variants of Thyroid-Binding Globulin With Puberty in Boars and Responses to Hemicastration - (Peer Reviewed Journal)
Ford, J.J., Rohrer, G.A., Nonneman, D.J., Lunstra, D.D., Wise, T.H. 2010. Association of Allelic Variants of Thyroid-Binding Globulin With Puberty in Boars and Responses to Hemicastration. Animal Reproduction Science. 119(3-4):228-234.
Association of Single Nucleotide Polymorphism (SNP) Markers in Candidate Genes and QTL Regions with Pork Quality in Commercial Pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Miller, R.K., Zerby, H., Moeller, S.J. 2010. Association of Single Nucleotide Polymorphism (SNP) Markers in Candidate Genes and QTL Regions with Pork Quality in Commercial Pigs. Proc., Midwestern Section of the American Society of Animal Science Meeting. Abstract #33. p. 11.
Allele-Specific Transcription Factor Binding in Pig Calpastatin Promoter Regions - (Abstract Only)
Nonneman, Dan J., Lindholm-Perry, Amanda K., Shackelford, Steven D., King, D.Andy, Wheeler, Tommy L., Rohrer, Gary A. 2010. Allele-Specific Transcription Factor Binding in Pig Calpastatin Promoter Regions. Plant and Animal Genome Conference Proceedings XVIII. 1/9-13/2010. San Diego, CA. Abstract #P607.
Characterization of Conserved and Nonconserved Imprinted Genes in Swine - (Abstract Only)
Freking, B.A., Bischoff, S.R., Tsai, S., Hardison, N., Motsinger-Reif, A.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2010. Characterization of Conserved and Nonconserved Imprinted Genes in Swine [abstract]. Plant and Animal Genome XVIII Conference. Abstract No. W024. Available: http://www.intl-pag.org/18/abstracts/W04_PAGXVIII_024.html
Association of Functional SNPs in Pig Calpastatin Regulatory Regions with Tenderness - (Abstract Only)
Nonneman, D.J., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Rohrer, G.A., Bierman, C., Miller, R.K., Zerby, H., Moeller, S.J. 2010. Association of Functional SNPs in Pig Calpastatin Regulatory Regions with Tenderness. Proc., Midwestern Section of the American Society of Animal Science Meeting. March 15-17, 2010. Des Moines, IA. Abstract #34. p. 11-12.
Quantitative genomics of female reproduction - (Book / Chapter)
Vallet, J.L., Nonneman, D.J., Kuehn, L.A. 2010. Quantitative genomics of female reproduction. In: Jiang, Z., Ott, T.L., editors. Reproductive Genomics in Domestic Animals. Ames, IA: Wiley-Blackwell Publishing. p. 23-51.
Association Analyses of Candidate SNP on Reproductive and Production Traits in Swine - (Peer Reviewed Journal)
Rempel, L.A., Nonneman, D.J., Wise, T.H., Erkens, T., Peelman, L.J., Rohrer, G.A. 2010. Association Analyses of Candidate Single Nucleotide Polymorphisms on Reproductive Traits in Swine. Journal of Animal Science. 88:1-15.
Characterization of Conserved and Non-conserved Imprinted Genes in Swine - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S., Hardison, N., Motsinger-Reif, A.A., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2009. Characterization of Conserved and Non-conserved Imprinted Genes in Swine. Biology of Reproduction. 81(5):906-920.
Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology - (Peer Reviewed Journal)
Ramos, A.M., Crooijmans, R.P.M.A., Affara, N.A., Amaral, A.J., Archibald, A.L., Beever, J.E., Bendixen, C., Churcher, C., Clark, R., Dehais, P., Hansen, M.S., Hedegaard, J., Hu, Z.L., Kerstens, H.H., Law, A.S., Megens, H.J., Milan, D., Nonneman, D.J., Rohrer, G.A., Rothschild, M.F., Smith, T.P.L., Schnabel, R.D., Van Tassell, C.P., Taylor, J.F., Wiedmann, R.T., Schook, L.B., Groenen, M.A.M. 2009. Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology. PLoS One 4(8):E6524. p. 1-13.
Molecular Cloning and Characterisation of Heparanase mRNA in Porcine Placenta Throughout Gestation - (Peer Reviewed Journal)
Miles, J.R., Vallet, J.L., Freking, B.A., Nonneman, D.J. 2009. Molecular Cloning and Characterisation of Heparanase mRNA in Porcine Placenta Throughout Gestation. Reproduction, Fertility and Development. 21(6):757-772.
Relationships among calpastatin single nucleotide polymorphisms, calpastatin expression and tenderness in pork longissimus - (Peer Reviewed Journal)
Lindholm-Perry, A.K., Rohrer, G.A., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M., Nonneman, D.J. 2009. Relationships among calpastatin single nucleotide polymorphisms, calpastatin expression and tenderness in pork longissimus. Animal Genetics. 40(5):713-721.
MicroRNA Transcriptome Profiles During Swine Skeletal Muscle Development - (Peer Reviewed Journal)
McDaneld, T.G., Smith, T.P., Doumit, M.E., Miles, J.R., Coutinho, L.L., Sonstegard, T.S., Matukumalli, L.K., Nonneman, D.J., Wiedmann, R.T. 2009. MicroRNA Transcriptome Profiles During Swine Skeletal Muscle Development. Biomed Central (BMC) Genomics. 10:77.
Impact of Selection for Uterine Capacity on the Placental Transcriptome - (Abstract Only)
Freking, B.A., Miles, J.R., Bischoff, S.R., Tsai, S., Hardison, N., Xia, Y., Nonneman, D.J., Vallet, J.L., Piedrahita, J.A. 2009. Impact of Selection for Uterine Capacity on the Placental Transcriptome [Abstract]. In: Control of Pig Reproduction VIII (H. Rodriguez-Martinez, J.L. Vallet and A.J. Ziecik, eds.) Journal of Reproduction and Fertility Supplement. 66:207-208.
Positional candidate genes for kyphosis in commercial swine populations - (Abstract Only)
Lindholm-Perry, A.K., Rohrer, G.A., Keele, J.W., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M., Nonneman, D.J. 2009. Positional Candidate Genes for Kyphosis in Commercial Swine Populations. Proc., Plant and Animal Genome Conference XVII. 1/10-14/2009, San Diego, CA. P529.
SNP Discovery in Swine by Reduced Representation and High Throughput Pyrosequencing - (Abstract Only)
Nonneman, D.J., Wiedmann, R.T., Smith, T.P. 2009. SNP Discovery in Swine by Reduced Representation and High Throughput Pyrosequencing. Plant and Animal Genome Conference XVII Proceedings. 1/10-14/2009, San Diego, CA. Abstract P531.
Design of the Illumina Porcine 50K+ SNP Iselect(TM) Beadchip and Characterization of the Porcine HapMap Population - (Abstract Only)
Groenen, M.A., Crooijmans, R.P., Ramos, A.M., Amaral, A.J., Kerstens, H., Bendixen, C., Hedegaard, J., Rohrer, G.A., Smith, T.P., Van Tassell, C.P., Taylor, J.F., Rothschild, M., Hu, Z., Nonneman, D.J., Beever, J., Archibald, A., Law, A., Milan, D., Hansen, M., Schook, L. 2009. Design of the Illumina Porcine 50K+ SNP Iselect(TM) Beadchip and Characterization of the Porcine HapMap Population. Plant and Animal Genome Conference Proceedings. 1/10-14/09, San Diego, CA. Abstract W493.
SNP discovery in swine by reduced representation and high throughput pyrosequencing - (Peer Reviewed Journal)
Wiedmann, R.T., Smith, T.P., Nonneman, D.J. 2008. SNP discovery in swine by reduced representation and high throughput pyrosequencing. BioMed Central (BMC) Genetics. 9:81.
Genetic relationships of body composition, serum leptin, and age at puberty in gilts - (Peer Reviewed Journal)
Kuehn, L.A., Nonneman, D.J., Klindt, J.M., Wise, T.H. 2009. Genetic relationships of body composition, serum leptin, and age at puberty in gilts. Journal of Animal Science. 87(2):477-483.
Studies on cattle genomic structural variation provide insights into ruminant speciation and adaptation - (Abstract Only)
Liu, G., Zhu, B., Alexander, L.J., Matukumalli, L.K., Van Tassell, C.P., Sonstegard, T.S., Nonneman, D.J., Keele, J.W. 2009. Studies on cattle genomic structural variation provide insights into ruminant speciation and adaptation. [abstract]. Plant and Animal Genome Conference Proceedings. W093.
High throughput SNP discovery and validation in the pig: towards the development of a high density swine SNP chip - (Abstract Only)
Ramos, A.M., Crooijmans, R.P., Fonseca, A., Kerstens, H., Bendixen, C., Hedegaard, J., Rohrer, G.A., Smith, T.P., Van Tassell, C.P., Taylor, J.F., Rothschild, M., Nonneman, D.J., Beever, J., Archibald, A., Schook, L., Groenen, M.A. 2008. High throughput SNP discovery and validation in the pig: towards the development of a high density swine SNP chip. Proc., 2nd European Conference on Pig Genomics, June 4-5, 2008, Ljubljana, Slovenia. Poster #2234.
Genetic variation in the mannosidase 2B2 gene and its association with ovulation rate in pigs. - (Peer Reviewed Journal)
Campbell, E.M., Nonneman, D.J., Kuehn, L.A., Rohrer, G.A. 2008. Genetic variation in the mannosidase 2B2 gene and its association with ovulation rate in pigs. Animal Genetics. 39:515-519.
Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S., Hardison, N.E., York, A.M., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2008. Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays. Biomed Central (BMC) Genomics 9:252.
Update on genetic markers for pork quality - (Proceedings)
Rohrer, G.A., Holl, J.W., Lindholm-Perry, A.K., Nonneman, D.J., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2007. Update on genetic markers for pork quality. Conference Proc., National Swine Improvement Federation Conference & Ann. Mtg., Dec. 5-7, 2007. Kansas City, MO, NSIF Volume 32, www.nsif.com
Placental transcriptome profile differences associated with selection for uterine capacity - (Abstract Only)
Freking, B.A., Miles, J.R., Bischoff, S.R., Xia, Y., Nonneman, D.J., Vallet, J.L., Piedrahita, J.A. 2008. Placental transcriptome profile differences associated with selection for uterine capacity [abstract]. Journal of Animal Science. 86(E-Suppl. 3):49. Abstract #36.
Evidence of Allelic Suppression for Transcripts Expressed in Day 30 Pig Embryos by SNP Genotyping - (Abstract Only)
Freking, B.A., Nonneman, D.J., Rohrer, G.A., Bischoff, S.R., Tsai, S., Piedrahita, J.A. 2008. Evidence of allelic suppression for transcripts expressed in day 30 pig embryos by SNP genotyping [abstract]. Journal of Animal Science. 86(E-Suppl. 3):51. Abstract #44.
Integrating the USMARC genetic map for the pig with the pig physical map - (Abstract Only)
Wiedmann, R.T., Freking, B.A., Nonneman, D.J., Snelling, W.M., Keele, J.W., Harhay, G.P., Rohrer, G.A. Integrating the USMARC genetic map for the pig with the pig physical map. 2008. Annual International Plant & Animal Genome Conference. Poster No. P565, pg 259.
Segmental duplication and copy number variation of the patched domain containing 3 (PTCHD3) locus on pig chromosome 10 - (Abstract Only)
Nonneman, D.J., Kuehn, L.A. 2008. Segmental duplication and copy number variation of the patched domain containing 3 (PTCHD3) locus on pig chromosome 10 (abstract). Plant and Animal Genome XVI Conference Proceedings. Poster No. P578.
A high utility integrated map of the pig genome - (Peer Reviewed Journal)
Humphray, S.J., Scott, C.E., Clark, R., Marron, B., Bender, C., Camm, N., Davis, J., Jenks, A., Noon, A., Patel, M., Sehra, H., Yang, F., Rogatcheva, M.B., Milan, D., Chardon, P., Rohrer, G., Nonneman, D., de Jong, P., Meyers, S.N., Archibald, A., Beever, J.E., Schook, L.B., Rogers, J. 2007. A high utility integrated map of the pig genome. Genome Biology. 8(7):R139.
Comparative and physical mapping of 112 previously reported and 105 new porcine microsatellites - (Peer Reviewed Journal)
Alexander, L.J., Juneja, B., Shiroma, D., Nonneman, D.J., Snelling, W.M., Fahrenkrug, S.C. 2007. Comparative and physical mapping of 112 previously reported and 105 new porcine microsatellites. Animal Genetics 38:584-594.
Associations of Candidate SNP on Age, Leptin Concentration, Backfat, and Body Weight at Puberty in Gilts - (Abstract Only)
Kuehn, L.A., Nonneman, D.J., Jiang, Z., Leymaster, K.A., Wise, T.H. 2007. Associations of candidate SNP on age, leptin concentration, backfat, and body weight at puberty in gilts [abstract]. Journal of Animal Science. 85(Suppl. 2):63. Abstract #50.
Single Nucleotide Polymorphisms for Pig Identification and Parentage Exclusion - (Peer Reviewed Journal)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2007. Single nucleotide polymorphisms for pig identification and parentage exclusion. Animal Genetics. 38:253-258.
Detection of Single Nucleotide Polymorphisms Associated with Ultrasonic Backfat Depth in a Segregating Meishan x White Composite Population - (Peer Reviewed Journal)
Kuehn, L.A., Rohrer, G.A., Nonneman, D.J., Thallman, R.M., Leymaster, K.A. 2007. Detection of single nucleotide polymorphisms associated with ultrasonic backfat depth in a segregating Meishan x White Composite population. Journal of Animal Science. 85:1111-1119.
Detection of transcriptional difference of porcine imprinted genes using different microarray platforms - (Peer Reviewed Journal)
Tsai, S., Mir, B., Martin, A.C., Estrada, J.L., Bischoff, S.R., Hsieh, W., Cassady, J.P., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. (BMC) Genomics. 7:328.
Novel porcine repetitive elements - (Peer Reviewed Journal)
Wiedmann, R.T., Nonneman, D.J., Keele, J.W. 2006. Novel porcine repetitive elements. Biomed Central (BMC) Genomics. 7:304 (12 pp). Online. BMC Genomics doi:10.1186/1471-2164/7/304. Available: http://www.biomedcentral.com/1471-2164/7/304.
Sequencing the Pig Genome Using a Mapped BAC by BAC Approach - (Abstract Only)
Humphray, S.J., Scott, C., Clark, R., Marron, B., Plumb, R., Bender, C., Camm, N., Davis, J., Jenks, A., Noon, A., Patel, M., Sehra, H., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J., De Jong, P., Meyers, S., Archibald, A., Beever, J., Schook, L., Rogers, J. 2007. Sequencing the pig genome using a mapped BAC by BAC approach. Plant and Animal Genome Conference Proceedings. Abstract P34, p. 110.
Fine-mapping QTL for nipple number in the pig - (Abstract Only)
Nonneman, D.J., Kuehn, L.A., Rohrer, G.A. 2007. Fine-mapping QTL for nipple number in the pig [abstract]. Plant and Animal Genome XV Conference. Poster No. P579.
An updated USMARC genetic map for the pig integrated with the pig physical map - (Abstract Only)
Rohrer, G.A., Snelling, W.M., Freking, B.A., Nonneman, D.J., Harhay, G.P., Keele, J.W. 2007. An updated USMARC genetic map for the pig integrated with the pig physical map [abstract]. Plant and Animal Genome XV Conference. Poster No. W421.
Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10: possible associations with reproductive traits - (Peer Reviewed Journal)
Nonneman, D.J., Wise, T.H., Ford, J.J., Kuehn, L.A., Rohrer, G.A. 2006. Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10: possible associations with reproductive traits. Biomed Central (BMC) Veterinary Research. 2:28. 2006.
A LINEAR MIXED MODEL APPROACH TO IDENTIFYING EXPRESSED SINGLE FEATURE POLYMORPHISMS - (Abstract Only)
Bischoff, S.R., Tsai, S., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2006. A linear mixed model approach to identifying expressed single feature polymorphisms [abstract]. International Mammalian Genome Society (IMGS) Annual Meeting, Charleston, SC, November, 2006. Abstract #P12.
CHARACTERIZATION OF THE ALDO-KETO REDUCTASE 1C GENE CLUSTER ON PIG CHROMOSOME 10 AND ASSOCIATION WITH AGE OF PUBERTY AND OVULATION RATE - (Abstract Only)
Nonneman, D.J., Wise, T.H., Ford, J.J., Rohrer, G.A. 2006. Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10 and association with age of puberty and ovulation rate. (Abstract) Animal Genetics International Conference Proceedings. p. 88. Abstract #D277.
DETECTION OF SINGLE NUCLEOTIDE POLYMORPHISMS ON PORCINE CHROMOSOME 7 ASSOCIATED WITH ULTRASONIC BACKFAT IN A SEGREGATING MEISHAN X WHITE CROSS POPULATION USING A MODEL WITH POLYGENIC EFFECTS - (Abstract Only)
Kuehn, L.A., Rohrer, G.A., Nonneman, D.J., Thallman, R.M., Leymaster, K.A. 2006. Detection of single nucleotide polymorphisms on porcine chromosome 7 associated with ultrasonic backfat in a segregating Meishan x White Cross population using a model with polygenic effects. (Abstract) Animal Genetics International Conference Proceedings. p. 104. Abstract #E353.
SEQUENCING THE PIG GENOME USING A BAC BY BAC APPROACH - (Abstract Only)
Humphray, S., Scott, C., Clark, R., Marron, B., Jones, M., Plumb, R., Sims, S., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J., De Jong, P., Meyers, S., Archibald, A., Beever, J., Schook, L., Rogers, J. 2006. Sequencing the pig genome using a BAC by BAC approach. (Abstract) Animal Genetics International Conference Proceedings. p. 56. Abstract #B404.
Allelic variation in porcine resistin (RETN) gene is associated with fatness traits in a Wild Boar x Meishan reference family - (Abstract Only)
Cepica, S., Knoll, A., Masopust, M., Vykoukalova, Z., Bartenschlager, H., Nonneman, D.J., Rohrer, G.A., Geldermann, H. 2006. Allelic variation in porcine resistin (RETN) gene is associated with fatness traits in a Wild Boar x Meishan reference family. Proc., 30th International Conference on Animal Genetics Abstract #C310, p. 72.
EXPRESSION PROFILES OF MICRO-RNAS IN SWINE MUSCLE DEVELOPMENT - (Abstract Only)
Wiedmann, R.T., Doumit, M.E., Matukumalli, L.K., Sonstegard, T.S., Coutinho, L.L., Nonneman, D.J., Smith, T.P. 2006. Expression profiles of micro-RNAs in swine muscle development. (Abstract) International Conference on Animal Genetics. p. 70. Abstract #C278.
MOLECULAR CLONING OF PORCINE OGT CDNA AND MAPPING TO THE X CHROMOSOME - (Abstract Only)
Kim, J.G., Ford, J.J., Rohrer, G.A., Nonneman, D.J. 2006. Molecular cloning of porcine OGT cDNA and mapping to the X chromosome [abstract]. Biology of Reproduction. Supplement:154.
REARRANGED GENE ORDER BETWEEN PIG AND HUMAN IN A QUANTITATIVE TRAIT LOCI REGION ON SSC3 - (Peer Reviewed Journal)
Mousel, M.R., Nonneman, D.J., Rohrer, G.A. 2006. Rearranged gene order between pig and human in a quantitative trait loci region on SSC3. Animal Genetics. 37:403-406
SEQUENCE VARIATION AND EVALUATION OF INHIBIN ALPHA-SUBUNIT AND STEROIDOGENIC ACUTE REGULATORY PROTEIN FOR REPRODUCTIVE TRAITS IN SWINE - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Vallet, J.L., Wise, T.H., Rohrer, G.A. Sequence variation and evaluation of inhibin alpha-subunit and steroidogenic acute regulatory protein for reproductive traits in swine. Animal Genetics. 37:424-425. 2006.
ANNOTATION OF THE AFFYMETRIX PORCINE GENOME MICROARRAY - (Peer Reviewed Journal)
Tsai, S., Cassady, J.P., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2006. Annotation of the affymetrix porcine genome microarray. Animal Genetics. 37:423-424.
RADIATION HYBRID MAPPING OF 18 POSITIONAL AND PHYSIOLOGICAL CANDIDATE GENES FOR ARTHROGRYPOSIS MULTIPLEX CONGENITA ON PORCINE CHROMOSOME 5 - (Peer Reviewed Journal)
Genini, S., Nguyen, T.T., Malek, M., Talbot, R., Gebert, S., Rohrer, G.A., Nonneman, D.J., Stranzinger, G., Vogeli, P. 2006. Radiation hybrid mapping of 18 positional and physiological candidate genes for arthrogryposis multiplex congenita on porcine chromosome 5. Animal Genetics. 37:239-244.
VALIDATION OF QTL FOR REPRODUCTIVE TRAITS IN ADVANCED GENERATIONS OF A MEISHAN CROSS POPULATION - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Wise, T.H., Ford, J.J. 2006. Validation of QTL for reproductive traits in advanced generations of a Meishan cross population. Proc., Plant and Animal Genome XIV, 1/14-18/2006. San Diego, CA, Poster #P577, p. 245.
LACK OF ASSOCIATION OF CALPASTATIN HAPLOTYPES WITH MEAT QUALITY IN A DUROC-LANDRACE SWINE RESOURCE POPULATION - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2005. Lack of association of calpastatin haplotypes with meat quality in a Duroc-Landrace swine resource population. Proc., Midwestern Section of the American Society of Animal Science. Abstract #38. p. 9.
ANNOTATION OF AFFYMETRIX PORCINE GENOME MICROARRAY CHIP - (Abstract Only)
Tsai, S., Weir, B., Cassady, J., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Annotation of affymetrix porcine genome microarray chip. Plant and Animal Genome Conference Proceedings. Poster #P768. p. 292.
AN INTEGRATED BAC PHYSICAL MAP OF THE PIG GENOME AND SELECTION OF THE MINIMUM TILEPATH - (Abstract Only)
Humphray, S., Scott, C., Clark, R., Marron, B., Plumb, R., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J. 2006. An integrated BAC physical map of the pig genome and selection of the minimum tilepath. Plant and Animal Genome Conference Proceedings. Poster #W237. p. 60.
MICROARRAY PLATFORM COMPARISON FOR PORCINE GENE EXPRESSION STUDIES - (Abstract Only)
Tsai, S., Mir, B., Martin, A., Estrada, J., Bischoff, S., Cassady, J., Weir, B., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Microarray platform comparison for porcine gene expression studies. Plant and Animal Genome Conference Proceedings. Poster #W241. p. 61.
USE OF PORCINE PARTHENOTES AND GENE EXPRESSION PROFILING USING MICROARRAYS FOR IDENTIFICATION OF IMPRINTED GENES - (Abstract Only)
Piedrahita, J.A., Bischoff, S.R., Estrada, J.L., Freking, B.A., Nonneman, D.J., Martin, A.C., Mir, B., Rohrer, G.A., Tsai, S. 2006. Use of porcine parthenotes and gene expression profiling using microarrays for identification of imprinted genes [abstract]. Proceedings of the 32nd International Conference of the International Embryo Transfer Society (IETS), January 8-10, 2006, Orlando, FL. Page 239.
DEVELOPMENT OF INFORMATION SYSTEMS FOR MARKER-ASSISTED SELECTION OF CATTLE - (Proceedings)
Nonneman, D.J., Casas, E. 2005. Development of information systems for marker-assisted selection of cattle. Morelos, Mexico. 11/13-19/2005. IN: Proceedings, XLI National Livestock Research Meeting.
DEVELOPMENT OF POPULATIONS FOR IDENTIFYING QUANTITATIVE TRAIT LOCI (QTL) IN SWINE - (Proceedings)
Nonneman, D.J. 2005. Development of populations for identifying quantitative trait loci (QTL) in swine. Morelos, Mexico. 11/13-19/2005. IN: Proceedings, XLI National Livestock Research Meeting.
ASSIGNMENT OF 12 GENES TO PORCINE CHROMOSOME 1Q BY LINKAGE AND RADIATION HYBRID MAPPING - (Peer Reviewed Journal)
Nonneman, D.J., Smith, T.P., Freking, B.A., Rohrer, G.A. 2005. Assignment of 12 genes to porcine chromosome 1q by linkage and radiation hybrid mapping. Anim. Genet. 36:532-533. 2005.
Isolation and Enrichment of Abundant Microsatellites From A Channel Catfish (Ictalurus punctatus) Brain CDNA Library - (Peer Reviewed Journal)
Nonneman, D., Waldbieser, G.C. 2005. Isolation and Enrichment of Abundant Microsatellites from a Channel Catfish (Ictalurus punctatus) Brain cDNA Library. Animal Biotechnology. 16:103-116.
ACHIEVEMENTS OF RESEARCH IN THE FIELD OF MOLECULAR GENETICS - (Other)
Casas, E., Nonneman, D.J. 2005. Achievements of research in the field of molecular genetics. In: Rosati, A. Tewolde, A., Mosconi, C., editors. WAAP Book of the Year 2005. Wageningen, The Netherlands: Wageningen Academic Publishers. p. 49-58.
(BRIEF NOTE) LINKAGE MAPPING OF THE PORCINE CHROMOGRANIN B (CHGB) GENE TO CHROMOSOME 17 - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2005. (Brief Note) Linkage mapping of the porcine chromogranin B (CHGB) gene to chromosome 17. Animal Genetics. 36(2):168.
A REFINED COMPARATIVE MAP BETWEEN PORCINE CHROMOSOME 3 AND HUMAN CHROMOSOMES 2, 7 AND 16 - (Peer Reviewed Journal)
Mousel, M.R., Nonneman, D.J., Rohrer, G.A. A refined comparative map between porcine chromosome 3 and human chromosomes 2, 7 and 16. Proc., Midwestern Section of the American Society of Animal Science. p. 11. 2005
IDENTIFICATION OF NOVEL PORCINE REPEAT ELEMENTS - (Abstract Only)
Wiedmann, R.T., Nonneman, D.J., Keele, J.W. Identification of novel porcine repeat elements. Proc., Plant & Animal Genome XIII, San Diego, CA. P528. p. 203. 2005.
(BRIEF NOTE) LINKAGE MAPPING OF THE PORCINE MYELIN BASIC PROTEIN (MBP) GENE TO CHROMOSOME 1 - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2005. (Brief note) Linkage mapping of the porcine myelin basic protein gene to chromosome 1. Animal Genetics. 36(2):163-164.
SINGLE NUCLEOTIDE POLYMORPHISMS FOR PIG IDENTIFICATION AND PARENTAGE EXCLUSION - (Abstract Only)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2005. Single nucleotide polymorphisms for pig identification and parentage exclusion. Proc., Plant & Animal Genome XIII, San Diego, CA. P203. p. 125.
A VARIANT OF PORCINE THYROXINE-BINDING GLOBULIN HAS REDUCED AFFINITY FOR THYROXINE AND IS ASSOCIATED WITH TESTIS SIZE - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A., Wise, T.H., Lunstra, D.D., Ford, J.J. 2005. A variant of porcine thyroxine-binding globulin has reduced affinity for thyroxine and is associated with testis size. Biology of Reproduction. 72:214-220.
ADDITION OF FOURTEEN ANCHORED LOCI TO THE PORCINE CHROMOSOME 8 COMPARATIVE MAP - (Peer Reviewed Journal)
Kim, J.G., Rohrer, G.A., Vallet, J.L., Christenson, R.K., Nonneman, D. 2004. Addition of 14 anchored loci to the porcine chromosome 8 comparative map. Animal Genetics. 35(6):474-476.
GENETICS: MOLECULAR - (Other)
Nonneman, D.J., Smith, T.P. 2004. Genetics: Molecular. Encyclopedia of Animal Science. p. 466-468.
COMPARATIVE MAPPING OF HUMAN CHROMOSOME 10 TO PIG CHROMOSOMES 10 AND 14 - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A. 2004. Comparative mapping of human chromosome 10 to pig chromosomes 10 and 14. Animal Genetics 35:338-343.
EVALUATION OF AN SNP IN STEROIDOGENIC ACUTE REGULATORY (STAR) PROTEIN FOR REPRODUCTIVE TRAITS IN SWINE - (Abstract Only)
Kim, J.G., Vallet, J.L., Christenson, R.K., Rohrer, G.A., Nonneman, D. 2004. Evaluation of an SNP in steroidogenic acute regulatory (STAR) protein for reproductive traits in swine [abstract]. Journal of Animal Science. 82(Supplement 1):65. (Abstract #M258)
MOLECULAR CLONING AND ENDOMETRIAL EXPRESSION OF PORCINE HIGH DENSITY LIPOPROTEIN RECEPTOR SR-BI DURING THE ESTROUS CYCLE AND EARLY PREGNANCY - (Peer Reviewed Journal)
Kim, J.G., Vallet, J.L., Nonneman, D., Christenson, R.K. 2004. Molecular cloning and endometrial expression of porcine high density lipoprotein receptor SR-BI during the estrous cycle and early pregnancy. Molecular and Cellular Endocrinology. 222(1-2):105-112.
ASSOCIATION OF A POLYMORPHISM IN THYROXINE BINDING GLOBULIN WITH BACKFAT DEPTH IN A COMPOSITE POPULATION CONTAINING 25% MEISHAN GERMPLASM - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Ford, J.J., Wise, T.H. 2004. Association of a polymorphism in thyroxine binding globulin with backfat depth in a composite population containing 25% meishan germplasm. Journal of Animal Science 82(Suppl. 2):42-43.
FUNCTIONAL VALIDATION OF A POLYMORPHISM FOR TESTSIS SIZE ON THE PORCINE X CHROMOSOME - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Ford, J.J., Wise, T.H., Lunstra, D.D. 2004. Functional validation of a polymorphism for testis size on the porcine X chromosome. Plant and Animal Genome Abstracts, W228, p. 62.
POSITIONAL CANDIDATE GENES FOR REPRODUCTIVE TRAITS IN A MEISHAN-WHITE COMPOSITE RESOURCE POPULATION ON PIG CHROMOSOME 10 - (Abstract Only)
Nonneman, D.J., Rohrer, G.A. 2003. Positional candidate genes for reproductive traits in a meishan-white composite resource population on pig chromosome 10. Journal of Animal Science 81(Suppl. 1):160.
BRIEF NOTE. LINKAGE MAPPING OF A SNP IN THE PORCINE MADH1 GENE TO A REGION OF CHROMOSOME 8 THAT CONTAINS QTL FOR UTERINE CAPACITY - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., ROHRER, G.A., VALLET, J.L., CHRISTENSON, R.K. BRIEF NOTE. LINKAGE MAPPING OF A SNP IN THE PORCINE MADH1 GENE TO A REGION OF CHROMOSOME 8 THAT CONTAINS QTL FOR UTERINE CAPACITY. ANIMAL GENETICS. 2003. v. 34(4). p. 310-311.
MOLECULAR CHARACTERIZATION AND ENDOMETRIAL EXPRESSION OF PORCINE SMAD1 - (Abstract Only)
KIM, J.G., VALLET, J.L., NONNEMAN, D.J., ROHRER, G.A., CHRISTENSON, R.K. MOLECULAR CHARACTERIZATION AND ENDOMETRIAL EXPRESSION OF PORCINE SMAD1. JOURNAL OF ANIMAL SCIENCE SUPPLEMENT. 2003. v. 81(Suppl. 1). p. 243. Abstract No. T27.
MOLECULAR CLONING OF THE PROCINE INHIBIN-BETA B PRECURSOR SUBUNIT GENE AND REASSIGNMENT TO CHROMOSOME 15 - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. MOLECULAR CLONING OF THE PROCINE INHIBIN-BETA B PRECURSOR SUBUNIT GENE AND REASSIGNMENT TO CHROMOSOME 15. ANIMAL GENETICS. 2003. v. 34. p. 213-215.
PRODUCTION OF A PORCINE-HUMAN COMPARATIVE MAP BASED ON THE PORCINE GENETIC MAP AND HUMAN GENOME SEQUENCE - (Proceedings)
Rohrer, G.A., Nonneman, D.J., Freking, B.A., Harhay, G.P., Snelling, W.M., Keele, J.W. 2002. Production of a porcine-human comparative map based on the porcine genetic map and human genome sequence. Plant and Animal Genome Conference Proceedings. Abstract P612.
BRIEF NOTE. LINKAGE MAPPING OF THE PORCINE TESTIS ENHANCED GENE TRANSCRIPT (TEGT) GENE TO CHROMOSOME 5 - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., VALLET, J.L., CHRISTENSON, R.K. BRIEF NOTE. LINKAGE MAPPING OF THE PORCINE TESTIS ENHANCED GENE TRANSCRIPT (TEGT) GENE TO CHROMOSOME 5. ANIMAL GENETICS. 2003. v. 34(2). p. 152-153.
DEVELOPMENT OF AN EST-DERIVED SNP-BASED LINKAGE MAP IN SWINE - (Proceedings)
Nonneman, D.J., Keele, J.W., Freking, B.A., Rohrer, G.A. Proceeding of the Plant & Animal Genome XI, 1/11-15/2003, San Diego, CA. p. 231.
BRIEF NOTE. LINKAGE MAPPING OF A SINGLE NUCLEOTIDE POLYMORPHISM (SNP) IN THE PORCINE QDPR GENE TO CHROMOSOME 8 - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., VALLET, J.L., ROHRER, G.A., CHRISTENSON, R.K. BRIEF NOTE. LINKAGE MAPPING OF A SINGLE NUCLEOTIDE POLYMORPHISM (SNP) IN THE PORCINE QDPR GENE TO CHROMOSOME 8. ANIMAL GENETICS. 2002. v. 33(6). p. 474.
LINKAGE MAPPING OF PORCINE DGAT1 TO A REGION OF PORCINE CHROMOSOME 4 THAT CONTAINS QTL FOR GROWTH AND FATNESS - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. LINKAGE MAPPING OF PORCINE DGAT1 TO A REGION OF PORCINE CHROMOSOME 4 THAT CONTAINS QTL FOR GROWTH AND FATNESS. ANIMAL GENETICS. 2002. v. 33. p. 472-473.
MAPPING OF THE PORCINE ALPHA-FETOPROTEIN (AFP) GENE TO SWINE CHROMOSOME 8 - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., VALLET, J.L., CHRISTENSON, R.K. MAPPING OF THE PORCINE ALPHA-FETOPROTEIN (AFP) GENE TO SWINE CHROMOSOME 8. ANIMAL GENETICS. 2002. v. 33(6). p. 471-472.
FINE MAPPING A QTL AFFECTING OVULATION RATE IN SWINE ON CHROMOSOME 8 - (Peer Reviewed Journal)
CAMPBELL, E.M.C., NONNEMAN, D.J., ROHRER, G.A. FINE MAPPING A QTL AFFECTING OVULATION RATE IN SWINE ON CHROMOSOME 8. JOURNAL OF ANIMAL SCIENCE. 2003. v.81. p. 1706-1714.
COMPARATIVE MAPPING OF A REGION ON CHROMOSOME 10 CONTAINING QTL FOR REPRODUCTION IN SWINE - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. COMPARATIVE MAPPING OF A REGION ON CHROMOSOME 10 CONTAINING QTL FOR REPRODUCTION IN SWINE. ANIMAL GENETICS. 2003. v. 34. p. 42-46.
GENETIC MAPPING PORCINE EST SEQUENCES USING LENGTH POLYMORPHISMS - (Proceedings)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2002. Genetic mapping porcine EST sequences using length polymorphisms. 28th Animal Genetics International Conference Proceedings. Abstract D115. p. 121-122.
MAPPING MICROSATELLITE MARKERS IDENTIFIED IN PORCINE EST SEQUENCES - (Peer Reviewed Journal)
ROHRER, G.A., FAHRENKRUG, S.C., NONNEMAN, D.J., TAO, N., WARREN, W.C. MAPPING MICROSATELLITE MARKERS IDENTIFIED IN PORCINE EST SEQUENCES. ANIMAL GENETICS. 2002. v. 33. p. 372-376.
COMPARATIVE RADIATION HYBRID MAPPING OF THE MOUSE HIGH GROWTH (HG) REGION IN CATTLE AND PIGS - (Abstract Only)
Farber, C.R., Smith, T.P., Nonneman, D.J., Medrano, J.F. 2002. Comparative Radiation Hybrid Mapping of the Mouse High Growth (HG) Region in Cattle and Pigs. Plant and Animal Genome Conference Proceedings X. San Diego, CA. 1/12-16/2002. Abstract P136. p. 112.
Variants of Microcystin in Southeastern USA Channel Catfish (Ictalurus puntctatus ralfinesque) Production Ponds - (Peer Reviewed Journal)
Zimba, P.V., Boue, S.M., Chatham, M.A., Nonneman, D.J. 2002. Variants of Microcystin in Southeastern USA Channel Catfish (Ictalurus puntctatus ralfinesque) Production Ponds. International Society Of Limnology 28:1163-1166.
MOLECULAR CLONING AND MAPPING OF THE BOVINE AND OVINE SKELETAL MUSCLE-SPECIFIC CALPAINS - (Peer Reviewed Journal)
RAPID COMMUNICATION: A POLYMORPHIC MICROSATELLITE IN THE PROMOTER REGION OF THE BOVINE CALPASTATIN GENE - (Peer Reviewed Journal)
AN IMPROVED PURIFICATION PROTOCOL FOR HEART AND SKELETAL MUSCLE CALPASTATIN REVEALS TWO ISOFORMS RESULTING FROM ALTERNATIVE SPLICING - (Peer Reviewed Journal)
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