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ARS Home » Plains Area » Clay Center, Nebraska » U.S. Meat Animal Research Center » Genetics and Animal Breeding » People & Locations » Gary Rohrer
Gary A Rohrer
Genetics and Animal Breeding
Research Geneticist (Animals)

Phone: (402) 762-4365
Fax: (402) 762-4390

(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)

Projects
Multi-Dimension Phenotyping to Enhance Prediction of Performance in Swine
In-House Appropriated (D)
  Accession Number: 443152
Assessing the Utility of Geophones to Determine Animal Activity in Swine Farrowing Pens for Precision Management Monitoring - Stanford University
Non-Funded Cooperative Agreement (N)
  Accession Number: 439413

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Impact of crate design, number of heat lamps, and lying posture on the occurrence of shoulder lesions in sows Reprint Icon - (Peer Reviewed Journal)
Bery, S., Brown-Brandl, T.M., Rohrer, G.A., Sharma, S., Leonard, S.M. 2024. Impact of crate design, number of heat lamps, and lying posture on the occurrence of shoulder lesions in sows. Biosystems Engineering. 247:249-256. https://doi.org/10.1016/j.biosystemseng.2024.09.017.
Online feeding behavior monitoring of individual group-housed grow-finish pigs using a low-frequency RFID electronic feeding system - (Peer Reviewed Journal)
Determining the presence and size of shoulder lesions in sows using computer vision Reprint Icon - (Peer Reviewed Journal)
Bery, S., Brown-Brandl, T.M., Jones, B.T., Rohrer, G.A., Sharma, S.R. 2023. Determining the presence and size of shoulder lesions in sows using computer vision. Animals. 14(1). Article 131. https://doi.org/10.3390/ani14010131.
A compendium of genetic regulatory effects across pig tissues Reprint Icon - (Peer Reviewed Journal)
Teng, J., Gao, Y., Yin, H., Bai, Z., Liu, S., Zeng, H., Consortium, T., Bai, L., Cai, Z., Zhao, B., Li, X., Xu, Z., Lin, Q., Pan, Z., Yang, W., Yu, X., Guan, D., Hou, Y., Keel-Mercer, B.N., Rohrer, G.A., Lindholm-Perry, A.K., Oliver, W.T., Ballester, M., Crespo, D., Quintanilla, R., Canela-Xandri, O., Rawlik, K., Xia, C., Yao, Y., Zhao, Q., Yao, W., Yang, L., Li, H., Zhang, H., Liao, W., Chen, T., Karlskov-Mortensen, P., Fredholm, M., Amills Eras, M., Clop, A., Giuffra, E., Wu, J., Cai, X., Diao, S., Pan, X., Wei, C., Li, J., Cheng, H., Wang, S., Su, G., Sahana, G., Lund, M., Dekkers, J., Kramer, L., Tuggle, C.K., Corbett, R., Groenen, M.A., Madsen, O., Godia, M., Rocha, D., Li, C., Pausch, H., Hu, X., Frantz, L., Luo, Y., Lin, L., Zhou, Z., Zhang, Z., Chen, Z., Cui, L., Xiang, R., Shen, X., Li, P., Huang, R., Tang, G., Li, M., Zhao, Y., Yi, G., Tang, Z., Jiang, J., Zhao, F., Yuan, X., Liu, X., Chen, Y., Xu, X., Zhao, S., Zhao, P., Haley, C., Zhou, H., Wang, Q., Pan, Y., Ding, X., Ma, L., Li, J., Navarro, P., Zhang, Q., Li, B., Tenesa, A., Liu, G. 2024. A compendium of genetic regulatory effects across pig tissues. Nature Genetics. 56:112-123. https://doi.org/10.1038/s41588-023-01585-7.
Statistical and machine learning approaches to describe factors affecting pre-weaning mortality of piglets - (Peer Reviewed Journal)
Estimation of cell type proportions from bulk RNA-Seq of porcine whole blood samples using partial reference-free deconvolution Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Lindholm-Perry, A.K., Rohrer, G.A., Oliver, W.T. 2023. Estimation of cell type proportions from bulk RNA-Seq of porcine whole blood samples using partial reference-free deconvolution. Animal Gene. 30. Article 200159. https://doi.org/10.1016/j.angen.2023.200159.
Identifying early-life behavior to predict mothering ability in swine utilizing NUtrack system Reprint Icon - (Peer Reviewed Journal)
Millburn, S., Schmidt, T., Rohrer, G.A., Mote, B. 2023. Identifying early-life behavior to predict mothering ability in swine utilizing NUtrack system. Animals. 13(18). Article 2897. https://doi.org/10.3390/ani13182897.
Relationships of genomic estimated breeding values for age at puberty, birth weight, and growth during development in normal cyclic and acyclic gilts Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Nonneman, D.J., Rohrer, G.A., Lents, C.A. 2023. Relationships of genomic estimated breeding values for age at puberty, birth weight, and growth during development in normal cyclic and acyclic gilts. Journal of Animal Science. 101. Article skad258. https://doi.org/10.1093/jas/skad258.
PigSense: Structural vibration-based activity and health monitoring system for pigs Reprint Icon - (Peer Reviewed Journal)
Dong, Y., Bonde, A., Codling, J.R., Bannis, A., Cao, J., Macon, A., Rohrer, G., Miles, J., Sharma, S., Brown-Brandl, T., Sangpetch, A., Sangpetch, O., Zhang, P., Noh, H. 2023. PigSense: Structural vibration-based activity and health monitoring system for pigs. ACM Transactions on Sensor Networks. 20(1):1-43. https://doi.org/10.1145/3604806.
Methods to predict lameness in sows - (Abstract Only)
gBLUP-GWAS identifies candidate genes, signaling pathways, and putative functional polymorphisms for age at puberty in gilts Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Nonneman, D.J., Snelling, W.M., Rohrer, G.A., Keel, B.N., Lents, C.A. 2023. gBLUP-GWAS identifies candidate genes, signaling pathways, and putative functional polymorphisms for age at puberty in gilts. Journal of Animal Science. Article skad063. https://doi.org/10.1093/jas/skad063.
Multi clustering of the hypothalamic–pituitary–ovary transcriptome in gilts with normal cyclicity or delayed puberty reveals genes related to puberty - (Abstract Only)
Wijesena, H., Keel, B.N., Nonneman, D.J., Rohrer, G.A., Snelling, W.M., Lents, C.A. 2023. Multi clustering of the hypothalamic–pituitary–ovary transcriptome in gilts with normal cyclicity or delayed puberty reveals genes related to puberty [abstract]. In: Proceedings of the Plant and Animal Genome Conference. January 13-18, 2023, San Diego, California. PE0874.
Multi-tissue multi-omics approach to investigate genomic factors underlying pubertal phenotypes in gilts - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Keel, B.N., Rohrer, G.A., Snelling, W.M., Lents, C.A. 2023. Multi-tissue multi-omics approach to investigate genomic factors underlying pubertal phenotypes in gilts [abstract]. In: Proceedings of the Plant and Animal Genome Conference, January 13-18, 2023, San Diego, California. Palm 1-2.
A review of swine heat production: 2003 to 2020 Reprint Icon - (Peer Reviewed Journal)
Ramirez, B.C., Hoff, S.J., Hayes, M.D., Brown-Brandl, T.M., Harmon, J.D., Rohrer, G.A. 2022. A review of swine heat production: 2003 to 2020. Frontiers in Animal Science. 3. Article 908434. https://doi.org/10.3389/fanim.2022.908434.
Thermal comfort evaluation of three genetic lines of nursery pigs using thermal images Reprint Icon - (Peer Reviewed Journal)
Brown-Brandl, T.M., Hayes, M.D., Rohrer, G.A., Eigenberg, R.A. 2022. Thermal comfort evaluation of three genetic lines of nursery pigs using thermal images. Biosystems Engineering. 225:1-12. https://doi.org/10.1016/j.biosystemseng.2022.11.002.
Behavioral time budgets for sows before and after farrowing - (Proceedings)
Macon, A., Brown-Brandl, T., Lee, B., Vander Woude Jr, E., Markvicka, E., Sharma, S., Rohrer, G.A. 2022. Behavioral time budgets for sows before and after farrowing. In: Proceedings of the American Society of Agricultural and Biological Engineers International (ASABE). July 17-20, 2022, Houston, TX. pg. 64. Paper 2200950.
Relationship of genomic estimated breeding values for age at puberty, birth weight, and growth in cyclic and anestrus gilts Reprint Icon - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Rohrer, G.A., Lents, C.A. 2022. Relationship of genomic estimated breeding values for age at puberty, birth weight, and growth in cyclic and anestrus gilts [abstract]. Journal of Animal Science. 100(Supplement 3):327. https://doi.org/10.1093/jas/skac247.597.
Genome-wide association for behavioral anestrus in swine - (Abstract Only)
Lameness detection in sows using few-shot approach - (Proceedings)
Posture detection of sows housed in farrowing crates using composite image models - (Proceedings)
Automatic phenotyping of activity traits utilizing NUtrack to enhance gilt selection - (Proceedings)
Sow posture and feeding activity monitoring in a farrowing pen using ground vibration - (Proceedings)
Dam parity structure and body condition during lactation influence piglet growth and gilt sexual maturation through pre-finishing Reprint Icon - (Peer Reviewed Journal)
Rempel, L.A., Keel, B.N., Oliver, W.T., Wells, J.E., Lents, C.A., Nonneman, D.J., Rohrer, G.A. 2022. Dam parity structure and body condition during lactation influence piglet growth and gilt sexual maturation through pre-finishing. Journal of Animal Science. 100(4):1-9. Article skac031. https://doi.org/10.1093/jas/skac031.
Determining the heat and moisture production rate in group housed gestating sows with esf system - (Abstract Only)
Hong, M., Brown-Brandl, T.M., Ramirez, B.C., Hoff, S.J., Rohrer, G.A., Sharma, R., Hayes, M.D., Harmon, J.D. 2022. Determining the heat and moisture production rate in group housed gestating sows with esf system [abstract]. In: Proceedings of the American Society of Agricultural and Biological Engineers. July 17-20,2022, Houston, Texas. Paper 2201038. pg. 64.
Factors affecting pre-weaning mortality of piglets - (Abstract Only)
Rahman, M.T., Brown-Brandl, T.M., Rohrer, G.A., Shi, Y., Sharma, S.R., Manthena, V. 2022. Factors affecting pre-weaning mortality of piglets [abstract]. In: Proceedings of the American Society of Agricultural and Biological Engineers. July 17-20, 2022, Houston, Texas. Paper 220581. pg. 23.
Transcriptomic analysis for pork color – The ham halo effect in biceps femoris Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Keel-Mercer, B.N., Lindholm-Perry, A.K., Rohrer, G.A., Wheeler, T.L., Shackelford, S.D., King, D.A. 2022. Transcriptomic analysis for pork color – The ham halo effect in biceps femoris. Meat and Muscle Biology. 6(1):1-8. Article 13050. https://doi.org/10.22175/mmb.13050.
Characterizing lactating sow posture in farrowing crates utilizing automated image capture and wearable sensors - (Proceedings)
Macon, A., Sharma, S., Lee, B., Markvicka, E., Rohrer, G.A., Miles, J.R., Brown-Brandl, T. 2021. Characterizing lactating sow posture in farrowing crates utilizing automated image capture and wearable sensors. Proceedings of the European Conference on Agricultural Engineering AgEng 2021, July 4-8, 2021, Evora, Portugal. p. 634-642.
GBLUP-GWAS identifies candidate genes and polymorphisms for age at puberty in gilts - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Snelling, W.M., Rohrer, G.A., Keel, B.N., Lents, C.A. 2021. GBLUP-GWAS identifies candidate genes and polymorphisms for age at puberty in gilts. In proceedings: International Society for Animal Genetics Conference, July 26-30, 2021. Virtual. p. 111. Abstract P320.
Effects of farrowing stall layout and number of heat lamps on sow and piglet behavior Reprint Icon - (Peer Reviewed Journal)
Leonard, S.M., Xin, H., Brown-Brandl, T.M., Ramirez, B.C., Johnson, A.K., Dutta, S., Rohrer, G.A. 2021. Effects of farrowing stall layout and number of heat lamps on sow and piglet behavior. Applied Animal Behaviour Science. 239. Article 105334. https://doi.org/10.1016/j.applanim.2021.105334.
Potential functional variants in AHR signaling pathways are associated with age at puberty in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Lents, C.A., Rempel, L.A., Rohrer, G.A. 2021. Potential functional variants in AHR signaling pathways are associated with age at puberty in swine. Animal Genetics. 52(3):284-291. Article 13051. https://doi.org/10.1111/age.13051.
Activity and bone lesion analysis on gilt retention to the breeding herd Reprint Icon - (Abstract Only)
Hauxwell, K., Ostrand, L.M., Schmidt, T.B., Psota, E., Mote, B.E., Rohrer, G.A. 2021. Activity and bone lesion analysis on gilt retention to the breeding herd [abstract]. Journal of Animal Science. 99(Supplement 1):154. https://doi.org/10.1093/jas/skab054.264.
Utilization of NUtrack to assess variance components and heritability of activity traits Reprint Icon - (Abstract Only)
Ostrand, L.M., Tranhaile-Grannemann, M.D., See, G., Schmidt, T.B., Psota, E., Rohrer, G.A., Mote, B.E. 2021. Utilization of NUtrack to assess variance components and heritability of activity traits [abstract]. Journal of Animal Science. 99(Supplement 1):17. https://doi.org/10.1093/jas/skab054.030.
Potential relationship of the porcine muscle thanatotranscriptome to pork quality - (Abstract Only)
King, D.A., Dickey, A.M., Shackelford, S.D., Wheeler, T.L., Rohrer, G.A., Nonneman, D.J. 2020. Potential relationship of the porcine muscle thanatotranscriptome to pork quality. [Abstract]. International Congress of Meat Science and Technology Proceedings. Poster No. 206.
The Ham Halo condition: Characterization and a possible approach for mitigation Reprint Icon - (Abstract Only)
King, D.A., Shackelford, S.D., Nonneman, D.J., Rohrer, G.A., Wheeler, T.L. 2020. The Ham Halo condition: Characterization and a possible approach for mitigation. Journal of Animal Science. 98(Supplement 4):96. https://doi.org/10.1093/jas/skaa278.176.
Dietary lysine-to-energy ratios for managing growth and pubertal development in replacement gilts Reprint Icon - (Peer Reviewed Journal)
Lents, C.A., Supakorn, C., Dedecker, A.E., Phillips, C.E., Boyd, R.D., Vallet, J.L., Rohrer, G.A., Foxcroft, G.R., Flowers, W.L., Trottier, N.L., Salak-Johnson, J.L., Bartol, F.F., Stalder, K.J. 2020. Dietary lysine-to-energy ratios for managing growth and pubertal development in replacement gilts. Applied Animal Science. 36(5):701-714. https://doi.org/10.15232/aas.2020-02016.
Sire variation in the severity of the ham halo condition Reprint Icon - (Peer Reviewed Journal)
King, D.A., Shackelford, S.D., Nonneman, D.J., Rohrer, G.A., Wheeler, T.L. 2020. Sire variation in the severity of the ham halo condition. Meat and Muscle Biology. 4(1). https://doi.org/10.22175/mmb.9743.
An improved pig reference genome sequence to enable pig genetics and genomics research Reprint Icon - (Peer Reviewed Journal)
Warr, A., Affara, N., Aken, B., Beiki, H., Bickhart, D.M., Billis, K., Chow, W., Eory, L., Finlayson, H.A., Flicek, P., Giron, C.G., Griffin, D.K., Hall, R., Hannum, G., Hourlier, T., Howe, K., Hume, D.A., Izuogu, O., Kim, K., Koren, S., Liu, H., Manchanda, N., Martin, F.J., Nonneman, D.J., O'Connor, R.E., Phillippy, A.M., Rohrer, G.A., Rosen, B.D., Rund, L.A., Sargent, C.A., Schook, L.B., Schroeder, S.G., Shwartz, A.S., Skinner, B.M., Talbot, R., Tseng, E., Tuggle, C.K., Watson, M., Smith, T.P., Archibald, A.L. 2020. An improved pig reference genome sequence to enable pig genetics and genomics research. GigaScience. 9(6):giaa051. https://doi.org/10.1093/gigascience/giaa051.
Effects of farrowing stall layout and number of heat lamps on sow and piglet production performance Reprint Icon - (Peer Reviewed Journal)
Leonard, S.M., Xin, H., Brown-Brandl, T.M., Ramirez, B.C., Dutta, S., Rohrer, G.A. 2020. Effects of farrowing stall layout and number of heat lamps on sow and piglet production performance. Animals. 10(2).Article 348. https://doi.org/doi:10.3390/ani10020348.
Feeding behavior of grow-finish swine and the impacts of heat stress Reprint Icon - (Peer Reviewed Journal)
Cross, A.J., Brown-Brandl, T.M., Keel, B.N., Cassady, J.P., Rohrer, G.A. 2020. Feeding behavior of grow-finish swine and the impacts of heat stress. Translational Animal Science. 4(2):986-992. https://doi.org/10.1093/tas/txaa023.
Using SNP weights derived from gene expression modules to improve GWAS power for feed efficiency in pigs - (Abstract Only)
Keel, B.N., Snelling, W.M., Lindholm-Perry, A.K., Oliver, W.T., Kuehn, L.A., Rohrer, G.A. 2020. Using SNP weights derived from gene expression modules to improve GWAS power for feed efficiency in pigs [abstract]. In proceedings: Plant and Animal Genome Conference Proceedings, San Diego, CA, 11-15 Jan 2020. W222. Available: https://plan.core-apps.com/pag_2020/abstract
Using SNP weights derived from gene expression modules to improve GWAS power for feed efficiency in pigs Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Snelling, W.M., Lindholm-Perry, A.K., Oliver, W.T., Kuehn, L.A., Rohrer, G.A. 2020. Using SNP weights derived from gene expression modules to improve GWAS power for feed efficiency in pigs. Frontiers in Genetics. 10:1339. https://doi.org/10.3389/fgene.2019.01339.
Genome-wide associations for fatty acid composition of pork identifies novel candidate SNP on chromosome 14 - (Abstract Only)
Nonneman, D.J., Clancy, M.D., Rohrer, G.A., Arkfeld, E., Boler, D.D., Dilger, A.C., King, A., Wheeler, T.L., Shackelford, S.D. 2020. Genome-wide associations for fatty acid composition of pork identifies novel candidate SNP on chromosome 14 [abstract]. In proceedings: Plant and Animal Genome Conference XXVIII, San Diego, CA, January 11-15, 2020. Abstract PE0396. Available: https://plan.core-apps.com/pag_2020/abstract/60658e794c2a6d06f3aa20dcfb5c9f80
A survey of copy number variation in the porcine genome detected from whole-genome sequence Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Lindholm-Perry, A.K., Oliver, W.T., Rohrer, G.A. 2019. A survey of copy number variation in the porcine genome detected from whole-genome sequence. Frontiers in Genetics. 10:737. https://doi.org/10.3389/fgene.2019.00737.
Evaluation of genotype quality parameters for SowPro90, a new genotyping array for swine Reprint Icon - (Peer Reviewed Journal)
Wijesena, H.R., Rohrer, G.A., Nonneman, D.J., Keel, B.N., Petersen, J.L., Kachman, S.D., Ciobanu, D.C. 2019. Evaluation of genotype quality parameters for SowPro90, a novel genotyping platform for swine. Journal of Animal Science. 97(8):3262-3273. https://doi.org/10.1093/jas/skz185.
A survey of genomic variants in commercial swine germplasm identified from whole-genome sequence - (Abstract Only)
Dam body condition during lactation influences piglet growth and maturation pre-finishing Reprint Icon - (Abstract Only)
Rempel, L.A., Keel, B.N., Oliver, W.T., Wells, J., Lents, C.A., Rohrer, G.A. 2019. Dam body condition during lactation influences piglet growth and maturation pre-finishing [abstract]. Journal of Animal Science. 97(Supplement 3):139-140. https://doi.org/10.1093/jas/skz258.285.
Cataloguing genetic variants in commercial swine - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2019. Cataloguing genetic variants in commercial swine [abstract]. In: Plant & Animal Genome Conference Proceedings XXVII, 12-16 January 2019, San Diego, CA. pg. 216. W1046. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-workshops.pdf
Genetic factors associated with changes in feeding behavior due to elevated temperature - (Abstract Only)
Fine mapping of QTL associated with age at puberty in gilts using a novel Affymetrix SNP (SowPro90) - (Abstract Only)
Wijesena, H.R., Nonneman, D.J., Keel, B.N., Riethoven, J.J., Rohrer, G.A., Kachman, S.D., Ciobanu, D.C. 2019. Fine mapping of QTL associated with age at puberty in gilts using a novel Affymetrix SNP (SowPro90) [abstract]. In: Plant and Animal Genome Conference Proceedings XXVII, 12-16 January 2019, San Diego, CA. pg. 116. PE0404. Available: https://www.intlpag.org/2019/images/pdf/2019/PAGXXVII-abstracts-posters.pdf
Porcine single nucleotide polymorphisms and their functional effect: an update Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Lindholm-Perry, A.K., Oliver, W.T., Rohrer, G.A. 2018. Porcine single nucleotide polymorphisms and their functional effect: an update. BMC Research Notes. 11:860. https://doi.org/10.1186/s13104-018-3973-6.
Evolution of the commercial sow Reprint Icon - (Abstract Only)
Rohrer, G.A. 2019. Evolution of the commercial sow [abstract]. Journal of Animal Science. 97 (Supplement 2):14. Abstract 25. https://doi.org/10.1093/jas/skz122.025.
Associations between day one piglet serum immunocrit ratio and subsequent growth during gilt development Reprint Icon - (Abstract Only)
Supakorn, C., Lents, C.A., Martinez, X., Vallet, J.L., Boyd, R.D., Rohrer, G.A., Dedecker, A.E., Stalder, K.J. 2019. Associations between day one piglet serum immunocrit ratio and subsequent growth during gilt development [abstract]. Journal of Animal Science. 97 (Supplement 2):146. Abstract 352. https://doi.org/10.1093/jas/skz122.258.
Dimensions of the modern pig Reprint Icon - (Peer Reviewed Journal)
Condotta, I.C.F.S., Brown-Brandl, T.M., Stinn, J.P., Rohrer, G.A., Davis, J.D., Silva-Miranda, K.O. 2018. Dimensions of the modern pig. Transactions of the ASABE. 61(5):1729-1739. https://doi.org/10.13031/trans.12826.
Genome-wide association of myoglobin concentrations in pork loins Reprint Icon - (Peer Reviewed Journal)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Nonneman, D.J., Keel, B.N., Rohrer, G.A. 2018. Genome-wide association of myoglobin concentrations in pork loins. Meat and Muscle Biology. 2(1):189-196. https://doi.org/10.22175/mmb2017.08.0042.
Genome-wide association of changes in swine feeding behaviour due to heat stress - (Peer Reviewed Journal)
Cross, A.J., Keel, B.N., Brown-Brandl, T.M., Cassady, J.P., Rohrer, G.A. 2018. Genome-wide association of changes in swine feeding behaviour due to heat stress. Genetics Selection Evolution. 50:11. https://doi.org/10.1186/s12711-018-0382-1.
Feed-forward and generalised regression neural networks in modelling feeding behaviour of pigs in the grow-finish phase Reprint Icon - (Peer Reviewed Journal)
Cross, A.J., Rohrer, G.A., Brown-Brandl, T.M., Cassady, J.P., Keel, B.N. 2018. Feed-forward and generalised regression neural networks in modelling feeding behaviour of pigs in the grow-finish phase. Biosystems Engineering. 173:124-133. https://doi.org/10.1016/j.biosystemseng.2018.02.005.
A survey of copy number variation in the porcine genome detected from whole-genome sequence - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2018. A survey of copy number variation in the porcine genome detected from whole-genome sequence [abstract]. Journal of Animal Science. 96(Supplement 2):17-18. Abstract 32.
A feed-forward neural network for modeling feeding behavior of group-housed grow-finish pigs with respect to thermal conditions - (Proceedings)
Keel, B.N., Cross, A.J., Brown-Brandl, T.M., Cassady, J.P., Rohrer, G.A. 2018. A feed-forward neural network for modeling feeding behavior of group-housed grow-finish pigs with respect to thermal conditions. In proceedings: World Congress of Genetics Applied in Livestock Production, 11-16 Feb 2018, Auckland, New Zealand. Volume Species-Porcine 1, 240. Available: https://www.wcgalp.org/proceedings/2018
Genome-wide association of myoglobin concentrations in pork loins - (Abstract Only)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Cassady, J.P., Nonneman, D.J., Rohrer, G.A. 2017. Genome-wide association of myoglobin concentrations in pork loins. [abstract] In proceedings: South Dakota State University Swine Day Proceedings. Brookings, SD. Oct. 11, 2017. pg. 12.
Impacts of genetic line, gender and season on feeding behavior of grow-finish swine - (Proceedings)
Cross, A.J., Brown-Brandl, T.M., Rohrer, G.A. 2017. Impacts of genetic line, gender and season on feeding behavior of grow-finish swine. Proceedings of the 13th Conference - Construction, Engineering and Environment in Livestock Farming, September 18-20, 2017, Stuttgart, Germany. p. 288-293.
Polymorphism in the intron 20 of porcine O-linked N-acetylglucosamine transferase Reprint Icon - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Kim, D., Shin, S., Rohrer, G.A. 2017. Polymorphism in the intron 20 of porcine O-linked N-acetylglucosamine transferase. Asian-Australasian Journal of Animal Sciences. 30(8):1086-1092. doi:10.5713/ajas.17.0143.
Genomics and metabolomics of post-weaning return to estrus Reprint Icon - (Peer Reviewed Journal)
Rempel, L.A., Rohrer, G.A., Nonneman, D.J. 2017. Genomics and metabolomics of post-weaning return to estrus. Molecular Reproduction and Development. 84(9):987-993. https://doi.org/10.1002/mrd.22820.
Genome wide association of changes in feeding behavior due to heat stress in pigs - (Abstract Only)
Cross, A.J., Keel, B.N., Brown-Brandl, T.M., Rohrer, G.A. 2017. Genome wide association of changes in feeding behavior due to heat stress in pigs [abstract]. International Society for Animal Genetics (ISAG). Abstract #MT279 (Abstract book p. 138-139). Available: http://www.isag.us/2017/docs/ISAG2017_Proceedings.pdf.
A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome Reprint Icon - (Peer Reviewed Journal)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2017. A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome. Animal Genetics. 48(4):404-411. doi:10.1111/age.12557.
Relationship of neuropeptide FF receptors with pubertal maturation of gilts Reprint Icon - (Peer Reviewed Journal)
Thorson, J.F., Heidorn, N.L., Ryu, V., Czaja, K., Nonneman, D.J., Barb, C.R., Hausman, G.J., Rohrer, G.A., Prezotto, L.D., McCosh, R.B., Wright-Johnson, E.C., White, B.R., Freking, B.A., Oliver, W.T., Hileman, S.M., Lents, C.A. 2017. Relationship of neuropeptide FF receptors with pubertal maturation of gilts. Biology of Reproduction. 96(3):617-634. doi:10.1095/biolreprod.116.144998
USMARC update on swine reproduction research - (Abstract Only)
Nonneman, D.J., Lents, C.A., Keel, B.N., Rohrer, G.A. 2017. USMARC update on swine reproduction research. Plant and Animal Genome Conference. [Abstract] In Proceedings: Plant and Animal Genome XXV Conference, Jan. 14-18, 2017. San Diego, CA. W914.
Evaluation of functional variation in candidate genes for pork quality - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Kalbfleisch, T.S., Shackelford, S.D., King, D.A., Wheeler, T.L. 2017. Evaluation of functional variation in candidate genes for pork quality [abstract]. Journal of Animal Science. 95(supplement 2):19-20. https://doi.org/10.2527/asasmw.2017.041.
A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome - (Abstract Only)
Keel, B.N., Nonneman, D.J., Rohrer, G.A. 2017. A survey of single nucleotide polymorphisms identified from whole-genome sequencing and their functional effect in the porcine genome [abstract]. Journal of Animal Science 95(Supplement 1):17-18. https://:doi.org/10.2527/asasmw.2017.037.
Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side Reprint Icon - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J. 2017. Genetic analysis of teat number in pigs reveals some developmental pathways independent of vertebra number and several loci which only affect a specific side. Genetics Selection Evolution. 49:4. doi:10.1186/s12711-016-0282-1.
Genetic improvement of sow lifetime productivity - (Abstract Only)
Rohrer, G.A., Cross, A.J., Lents, C.A., Miles, J.R., Nonneman, D.J., Rempel, L.A. 2017. Genetic improvement of sow lifetime productivity. [Abstract] In proceedings: Midwestern Section of the American Society of Animal Science. March 13-15, 2017. Omaha, NE. Journal of Animal Science Supplement 95(Suppl 2):11-12 doi:10.2527/asasmw.2017.026.
Genome-wide association of myoglobin concentrations in pork loins - (Abstract Only)
Cross, A.J., King, D.A., Shackelford, S.D., Wheeler, T.L., Cassady, J.P., Nonneman, D.J., Rohrer, G.A. 2017. Genome-wide association of myoglobin concentrations in pork loins [abstact]. Journal of Animal Science. 95(Suppl2):20. doi:10.2527/asasmw.2017/042.
Exploiting long read sequencing technologies to establish high quality highly contiguous pig reference genome assemblies - (Abstract Only)
Warr, A., Hall, R., Kim, K., Tseng, E., Koren, S., Phillippy, A.M., Bickhart, D.M., Rosen, B.D., Schroeder, S.G., Hume, D.A., Talbot, R., Rund, L., Schook, L.B., Chow, W., Howe, K., Nonneman, D.J., Rohrer, G.A., Putnam, N., Green, E., Watson, M., Smith, T.P., Archibald, A.L. 2017. Exploiting long read sequencing technologies to establish high quality highly contiguous pig reference genome assemblies [abstract]. Plant and Animal Genome Conference XX, January 14-18, 2017, San Diego, California. Paper No. 25025.
A GWAS of teat number in pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J. 2016. A GWAS of teat number in pigs [abstract]. International Society for Animal Genetics (35th ISAG). Abstract Book. p. 131-132 (Abstract # P5033).
Scan for allele frequency differences from pooled samples in lines of pigs selected for components of litter size - (Abstract Only)
Freking, B.A., Keele, J.W., Rohrer, G.A. 2016. Scan for allele frequency differences from pooled samples in lines of pigs selected for components of litter size [abstract]. Journal of Animal Science Supplement. 94 (E-Supplement 5):161 (Abstract # 0344).
Genome-wide association and identification of candidate genes for age at puberty in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Schneider, J.F., Lents, C.A., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2016. Genome-wide association and identification of candidate genes for age at puberty in swine. BMC Genetics. 17(1):50.
Segregation of naturally occurring mitochondrial DNA variants in a mini-pig model Reprint Icon - (Peer Reviewed Journal)
Cagnone, G., Tsai, T.-S, Srirattana, K., Rossello, F., Powell, D.R., Rohrer, G., Cree, L., Trounce, I.A., St. John, J.C. 2016. Segregation of naturally occurring mitochondrial DNA variants in a mini-pig model. Genetics. 202(3):931-944.
Potential functional variants associated with age at puberty in a validation population of swine - (Abstract Only)
Nonneman, D.J., Lents, C.A., Kalbfleisch, T.S., Vallet, J.L., Rohrer, G.A. 2016. Potential functional variants associated with age at puberty in a validation population of swine [abstract]. Plant and Animal Genome Conference Proceedings. XXIV Conference:Abstract #P0619.
Do you really know where this SNP goes? - (Abstract Only)
Rohrer, G.A., Nonneman, D., Schroeder, S.G., Chin, J., Koren, S., Phillippy, A., Green, R., Putnam, N., Smith, T.P.L. 2016. Do you really know where this SNP goes? [abstract] Plant and Animal Genome XXIV Conference Proceedings. Abstract #W909.
Development of resources and tools for mapping genetic sources of phenotypic variation - (Abstract Only)
Ciobanu, D.C., Tosky, E., Olson, S., Trenhaile, M., Lents, C.A., Smith, T.P.L., Nonneman, D., Rohrer, G.A., Chin, J., Miller, P.S., Burkey, T., Spangler, M.L., Riethoven, J.-J., Plastow, G.S., Kachman, S.D. 2016. Development of resources and tools for mapping genetic sources of phenotypic variation [abstract]. Plant and Animal Genome XXIV Conference Proceedings. Abstract #W914.
Plasma concentrations of acyl-ghrelin are associated with average daily gain and feeding behavior in grow-finish pigs Reprint Icon - (Peer Reviewed Journal)
Lents, C.A., Brown-Brandl, T.M., Rohrer, G.A., Oliver, W.T., Freking, B.A. 2016. Plasma concentrations of acyl-ghrelin are associated with average daily gain and feeding behavior in grow-finish pigs. Domestic Animal Endocrinology. 55:107-113.
Litter-of-origin trait effects on gilt development Reprint Icon - (Peer Reviewed Journal)
Vallet, J.L., Calderón-Díaz, J.A., Stalder, K.J., Phillips, C., Cushman, R.A., Miles, J.R., Rempel, L.A., Rohrer, G.A., Lents, C.A., Freking, B.A., Nonneman, D.J. 2016. Litter-of-origin trait effects on gilt development. Journal of Animal Science. 94(1):96-105.
A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL Reprint Icon - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J., Wiedmann, R.T., Schneider, J.F. 2015. A study of vertebra number in pigs confirms the association of vertnin and reveals additional QTL. BMC Genetics. 16(1):129.
Implementing meta-analysis from genome-wide association studies for pork quality traits Reprint Icon - (Peer Reviewed Journal)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, D.A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2015. Implementing meta-analysis from genome-wide association studies for pork quality traits. Journal of Animal Science. 93(12):5607-5617.
Meta-analysis of genome-wide association from genomic prediction models - (Peer Reviewed Journal)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2016. Meta-analysis of genome-wide association from genomic prediction models. Animal Genetics. 47(1):36-48.
Genome-wide copy number variations using SNP genotyping in a mixed breed swine population Reprint Icon - (Peer Reviewed Journal)
Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2015. Genome-wide copy number variations using SNP genotyping in a mixed breed swine population. PLoS One. 10(7):e0133529. DOI: 10.1371/journal.pone.0133529.
Can we make the pig placenta work better? - (Abstract Only)
Vallet, J.L., McNeel, A.K., Calderon-Diaz, J.A., Stalder, K.J., Phillips, C.E., Rohrer, G.A., Miles, J.R., Freking, B.A. 2015. Can we make the pig placenta work better? [abstract]. Society for the Study of Reproduction Annual Meeting. pp. 40-41 (Abstract #107). Available: https://www.ssr.org/
Thermal comfort evaluation of three genetic lines of modern pigs using thermal images - (Proceedings)
Brown-Brandl, T.M., Hayes, M.D., Rohrer, G.A., Eigenberg, R.A. 2015. Thermal comfort evaluation of three genetic lines of modern pigs using thermal images. In: Guarino, M., Berckmans, D., editors. Precision Livestock Farming '15, September 15-18, 2015, Milan, Italy. p. 700-710.
Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age Reprint Icon - (Peer Reviewed Journal)
Calderón Díaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Age at puberty, ovulation rate, and uterine length of developing gilts fed two lysine and three metabolizable energy concentrations from 100 to 260 d of age. Journal of Animal Science. 93(7):3521-3527.
Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age - (Abstract Only)
Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C.E., DeDecker, A.E., Foxcroft, G., Stalder, K. 2015. Age at puberty, ovulation rate, and reproductive tract traits of developing gilts fed two lysine levels and three metabolizable energy levels from 100 to 260 d of age [abstract]. Journal of Animal Science. 93(Supplement 2):81 (Abstract #180).
Coordinated international action to accelerate genome-to-phenome with FAANG, The Functional Annotation of Animal Genomes project Reprint Icon - (Review Article)
Andersson, L., Archibald, A.L., Bottema, C.D., Brauning, R., Burgess, S.C., Burt, D.W., Casas, E., Cheng, H.H., Clarke, L., Couldrey, C., Dalrymple, B.P., Elski, C.G., Foissac, S., Giuffra, E., Groenen, M.A., Hayes, B.J., Huang, L.S., Khatib, H., Kijas, J.W., Kim, H., Lunney, J.K., McCarthy, F.M., McEwan, J.C., Moore, S., Nanduri, B., Notredame, C., Palti, Y., Plastow, G.S., Reecy, J.M., Rohrer, G.A., Sarrapoulou, E., Schmidt, C.J., Silverstein, J., Tellam, R.L., Tixier-Biochard, M., Tosser-Klopp, G., Tuggle, C.K., Vilkki, J., White, S.N., Zhao, S., Zhou, H. 2015. Coordinated international action to accelerate genome-to-phenome with FAANG, The Functional Annotation of Animal Genomes project. Genome Biology. 16:57. DOI:10.1186/S13059-015-0622-4.
Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits - (Research Technical Update)
Calderon Diaz, J.A., Vallet, J.L., Lents, C.A., Nonneman, D.J., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Cushman, R.A., Freking, B.A., Rohrer, G.A., Phillips, C., Dedecker, A., Foxcroft, G., Stalder, K.J. 2015. Optimal dietary energy and protein for gilt development: Age at puberty, ovulation rate, and reproductive tract traits. Iowa State University Animal Industry Report. AS 661(ASL R3022). Available: https://lib.dr.iastate.edu/asn_air/vol661/iss1/85.
Effects of sire breed, gender, and postnatal litter size on plasma concentrations of acyl ghrelin and its relationship with growth traits and feeding behavior in swine - (Abstract Only)
Lents, C.A., Brown-Brandl, T.M., Rohrer, G.A., Oliver, W.T., Freking, B.A. 2015. Effects of sire breed, gender, and postnatal litter size on plasma concentrations of acyl ghrelin and its relationship with growth traits and feeding behavior in swine [abstract]. Journal of Animal Science. 93(Supplement 2):148 (Abstract #333).
Litter of origin effects on gilt development in a commercial setting - (Abstract Only)
Vallet, J.L., Calderon-Diaz, J.A., Stalder, K.J., Phillips, C.E., Miles, J.R., Wright-Johnson, E.C., Rempel, L.A., Lents, C.A., Nonneman, D., Rohrer, G.A., Freking, B.A., Cushman, R.A. 2015. Litter of origin effects on gilt development in a commercial setting [abstract]. Journal of Animal Science. 93(Supplement 2):79-80 (Abstract #177).
Genomewide association analysis for average birth interval and stillbirth in swine Reprint Icon - (Peer Reviewed Journal)
Schneider, J.F., Miles, J.R., Brown-Brandl, T.M., Nienaber, J.A., Rohrer, G.A., Vallet, J.L. 2015. Genomewide association analysis for average birth interval and stillbirth in swine. Journal of Animal Science. 93(2):529-540.
Research on gilt first estrus and pubertal development at USMARC - (Abstract Only)
Nonneman, D., Lents, C.A., Schneider, J.F., Vallet, J.L., Rohrer, G.A. 2015. Research on gilt first estrus and pubertal development at USMARC [abstract]. Plant and Animal Genome XXIII Conference Proceedings. Abstract #W827.
A study of vertebra number in pigs confirms the effect of vertnin and reveals additional QTL - (Abstract Only)
Rohrer, G.A., Nonneman, D., Schneider, J.F. 2015. A study of vertebra number in pigs confirms the effect of vertnin and reveals additional QTL [abstract]. Plant and Animal Genome XXIII Conference Proceedings. Abstract #P0370.
Methods for meta-analysis of genome-wide association studies - (Abstract Only)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Methods for meta-analysis of Genome-wide association studies [abstract]. Revista Argentina de Producción Animal. 34 (Supplement 1):83 (Abstract # GM 7).
Implementing Meta-analysis for genome-wide association studies of pork quality traits - (Abstract Only)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Implementing Meta-analysis for genome-wide association studies of pork quality traits [abstract]. Revista Argentina de Producción Animal. 34 (Supplement 1):82 (Abstract # GM 6).
Meta-analysis of genome wide association studies for pork quality traits - (Proceedings)
Bernal Rubio, Y.L., Gualdrón Duarte, J.L., Bates, R.O., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Canter, R.J.C., Steibel, J.P. 2014. Meta-analysis of genome wide association studies for pork quality traits. In: Proceedings of 10th World Congress of Genetics Applied to Livestock Production, August 17-22, 2014, Vancouver, British Columbia, Canada. 3 pp.
Optimal dietary energy and protein for the development of gilts - NPB #12-209 - (Research Technical Update)
Vallet, J., Calderon, J., Stalder, K., Phillips, C., Bradley, G., Miles, J., Rempel, L., Lents, C., Freking, B., Rohrer, G., Nonneman, D., Cushman, R. 2014. Optimal dietary energy and protein for the development of gilts - NPB #12-209. National Pork Board. Available: http://research.pork.org/FileLibrary/ResearchDocuments/12-209-Vallet-USDA.pdf.
Genomewide association and identification of candidate genes for ovulation rate in swine - (Peer Reviewed Journal)
Schneider, J.F., Nonneman, D.J., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2014. Genomewide association and identification of candidate genes for ovulation rate in swine. Journal of Animal Science. 92(9):3792-3803.
Dystrophin deficiency-induced changes in porcine skeletal muscle - (Proceedings)
Nonneman, D., Rohrer, G., Ross, J.W., Hollinger, K., Selsby, J.T. 2014. Dystrophin deficiency-induced changes in porcine skeletal muscle. Proceedings of American Meat Science Association 67th Annual Reciprocal Meat Conference, June 15-18, 2014, Madison, Wisconsin. 4 pp. http://www.meatscience.org/publications-resources/rmc-proceedings
Meta-analysis genomewide association of pork quality traits: ultimate pH and shear force - (Abstract Only)
Bernal Rubio, Y.L., Gualdron Duarte, J.L., Bates, R.0., Ernst, C.W., Nonneman, D., Rohrer, G.A., King, A., Shackelford, S.D., Wheeler, T.L., Cantet, R.J.C., Steibel, J.P. 2014. Meta-analysis genomewide association of pork quality traits: ultimate pH and shear force [abstract]. Journal of Animal Science. 92(Supplement 2):11-12 (Abstract #26).
AVPR1A alleles are pleiotropic sources of variation in age at puberty and reproductive longevity in sows - (Abstract Only)
Trenhaile, M.D., Lucot, K.L., Tart, J.K., Bundy, J.W., Thorson, J.F., Keuter, E.M., Wood, J.R., Rothschild, M.F., Rohrer, G.A., Miller, P.S., Spangler, M.L., Lents, C.A., Johnson, R.K., Kachman, S.D., Ciobanu, D.C. 2014. AVPR1A alleles are pleiotropic sources of variation in age at puberty and reproductive longevity in sows [abstract]. Journal of Animal Science. 92(Supplement 2):12 (Abstract #27).
Impact of genetic drift on access and benefit sharing under the Nagoya protocol: The case of the Meishan pig Reprint Icon - (Peer Reviewed Journal)
Blackburn, H.D., Plante, Y., Rohrer, G.A., Welch, E.W., Paiva, S. 2014. Impact of genetic drift on access and benefit sharing under the Nagoya protocol: The case of the Meishan pig. Journal of Animal Science. 92(4):1405-1411.
Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy Reprint Icon - (Peer Reviewed Journal)
Rohrer, G.A., Rempel, L.A., Miles, J.R., Keele, J.W., Wiedmann, R.T., Vallet, J.L. 2014. Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy. Animal Genetics. 45(3):340-349.
Validation of QTL in commercial-type pigs at USMARC - (Abstract Only)
Rohrer, G.A., Wiedmann, R.T., Schneider, J.F., Nonneman, D. 2014. Validation of QTL in commercial-type pigs at USMARC [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #W795.
EU-US ABWG AgENCODE Workshop - (Abstract Only)
Rohrer, G.A., Archibald, A.L., Elsik, C.G., Giuffra, E., Groenen, M.A.M. 2014. EU-US ABWG AgENCODE Workshop [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #W161.
Discovery of 14.6 million SNP in a mixed breed swine population - (Abstract Only)
Wiedmann, R.T., Nonneman, D., Rohrer, G.A. 2014. Discovery of 14.6 million SNP in a mixed breed swine population [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #P584.
Dissection of two QTL on SSC2 identifies candidate genes for ovulation rate in swine - (Abstract Only)
Nonneman, D., Schneider, J.F., Wiedmann, R.T., Vallet, J.L., Rohrer, G.A. 2014. Dissection of two QTL on SSC2 identifies candidate genes for ovulation rate in swine [abstract]. Plant and Animal Genome XXII Conference Proceedings. Abstract #P596.
Genome-wide association with delayed puberty in swine - (Peer Reviewed Journal)
Nonneman, D., Lents, C., Rohrer, G., Rempel, L., Vallet, J. 2014. Genome-wide association with delayed puberty in swine. Animal Genetics. 45(1):130-132.
Impact of genetic drift on developing access and benefit sharing guidelines under the Nagoya Protocol: The case of Meishan pigs imported into the US - (Abstract Only)
Blackburn, H.D., Plante, Y., Welch, E.W., Rohrer, G.A., Paiva, S.R. 2013. Impact of genetic drift on developing access and benefit sharing guidelines under the Nagoya Protocol: The case of Meishan pigs imported into the US. Meeting Abstract. American Society of Animal Science, Indianapolis, IN, July 8-12, 2013.
Genetic analysis of behavior traits in swine production - (Peer Reviewed Journal)
Rohrer, G.A., Brown-Brandl, T., Rempel, L.A., Schneider, J.F., Holl, J. 2013. Genetic analysis of behavior traits in swine production. Livestock Science. 157(1):28-37.
Analysis of feeding behavior of group housed growing-finishing pigs - (Peer Reviewed Journal)
Brown-Brandl, T.M., Rohrer, G.A., Eigenberg, R.A. 2013. Analysis of feeding behavior of group housed growing-finishing pigs. Computers and Electronics in Agriculture. 96:246–252. Online available: http://dx.doi.org/10.1016/j.compag.2013.06.002.
Genome-wide association of meat quality traits and tenderness in swine Reprint Icon - (Peer Reviewed Journal)
Nonneman, D.J., Shackelford, S.D., King, D.A., Wheeler, T.L., Wiedmann, R.T., Snelling, W.M., Rohrer, G.A. 2013. Genome-wide association of meat quality traits and tenderness in swine. Journal of Animal Science. 91(9):4043-4050.
Characterization of a novel porcine stress syndrome - (Proceedings)
Rohrer, G.A., Brown-Brandl, T.M., Nonneman, D.J. 2014. Characterization of a novel porcine stress syndrome [PowerPoint]. In Proceedings: National Swine Improvement Federation Conference and Annual Meeting, December 1-2, 2011, Lincoln, Nebraska. NSIF Volume 36. Available: http://www.nsif.com/Conferences/2011/pdf/Characterization%20of%20a%20novel%20porcine%20stress%20syndrome.pdf
Dystrophin insufficiency causes a Becker muscular dystrophy-like phenotype in swine - (Abstract Only)
Hollinger, K., Yang, C.-X., Ross, J.W., Rohrer, G.A., Nonneman, D., Selsby, J.T. 2013. Dystrophin insufficiency causes a Becker muscular dystrophy-like phenotype in swine [abstract]. Journal of Federation of American Societies for Experimental Biology. 27:1147.6.
Differences in X-chromosome transcriptional activity and cholesterol metabolism between placentae from swine breeds from asian and western origins - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S.Q., Hardison, N.E., Motsinger-Reif, A.A., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2013. Differences in X-chromosome transcriptional activity and cholesterol metabolism between placentae from swine breeds from Asian and Western origins. PLoS One. 8(1):e55345.
Identification of QTL affecting a piglet’s ability to acquire and absorb gamma-immunoglobulin from colostrum - (Abstract Only)
Rohrer, G.A., Rempel, L.A., Miles, J.R., Keele, J.W., Vallet, J.L. 2013. Identification of QTL affecting a piglet’s ability to acquire and absorb gamma-immunoglobulin from colostrum [abstract]. Journal of Animal Science. 91 (Supplement 2):63-64 (Abstract #O189).
Genome-wide association identifies candidate genes for ovulation rate in swine - (Abstract Only)
Nonneman, D., Schneider, J., Wiedmann, R., Vallet, J., Rohrer, G. 2013. Genome-wide association identifies candidate genes for ovulation rate in swine [abstract]. Journal of Animal Science. 91 (Supplement 2):64 (Abstract #O191).
Use of single nucleotide polymorphisms (SNP) to fine-map quantitative trait loci (QTL) in swine - (Abstract Only)
Rohrer, G.A., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Nonneman, D. 2013. Use of single nucleotide polymorphisms (SNP) to fine-map quantitative trait loci (QTL) in swine [abstract]. Plant and Animal Genome XXI Conference Proceedings. Abstract #W047.
Analysis of pig genomes provide insight into porcine demography and evolution - (Peer Reviewed Journal)
Groenen, M.A., Archibald, A.L., Uenishi, H., Tuggle, C., Takeuchi, Y., Rothschild, M.F., Rogel-Gaillard, C., Park, C., Milan, D., Hendrik-Jan, M., Li, S., Larkin, D., Kim, H., Franz, L.A., Caccamo, M., Hyeonju, A., Aken, B.L., Anselmo, A., Anthon, C., Auvil, L., Bouabid, B., Beattie, C.W., Bendixen, C., Berman, D.J., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Zhan, B., Bystrom, M., Capitanu, B., Silva, D.C., Chardon, P., Chen, C.T., Cheng, R., Choi, S., Chow, W., Clark, R.C., Clee, C., Crooijmans, R.P., Dawson, H.D., Dehais, P., De Sapio, F., Dibbits, B., Drou, N., Du, Z., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G.J., Fowler, K.E., Fredholm, M., Fritz, E., Gilbert, J.G., Giuffra, E., Gorodkin, J., Griffin, D., Harrow, J.L., Hayward, A., Howe, K., Zhi-Liang, H., Humphray, S.J., Hunt, T., Hornshoj, H., Jeon, J., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Jaebum, K., Kim, J., Kim, K., Kim, T., Larson, G., Lee, K., Lee, K., Leggett, R., Lewin, H.A., Li, Y., Liu, W., Loveland, J.E., Lu, Y., Lunney, J.K., Ma, J., Madsen, O., Mann, K., Mathews, L., Mclaren, S., Morozumi, T., Murtaug, M.P., Narayan, J., Nguyen, D., Ni, P., Oh, S., Onteru, S., Rohrer, G.A., et al. 2012. Analysis of pig genomes provide insight into porcine demography and evolution. Nature. 491(7424):393-8.
A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content - (Peer Reviewed Journal)
Tortereau, F., Servin, B., Frantz, L., Megens, H.-J., Milan, D., Rohrer, G., Wiedmann, R., Beever, J., Archibald, A.L., Schook, L.B., Groenen, M.A.M. 2012. A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content. BMC Genomics. 13:586.
Development of antinuclear antibodies and a genetic linkage in pigs infected with porcine circovirus type 2 - (Abstract Only)
Cheung, A.K., Kehrli, Jr., M.E., Lager, K.M., Gauger, P.C., Rohrer, G.A., Michael, D.D., Miller, L.C., Vincent, A.L., Braucher, D.R. 2012. Development of antinuclear antibodies and a genetic linkage in pigs infected with porcine circovirus type 2 [abstract]. IXth International Congress of Veterinary Virology. p. 189-190.
A defect in dystrophin causes a novel porcine stress syndrome - (Peer Reviewed Journal)
Nonneman, D.J., Brown-Brandl, T., Jones, S.A., Wiedmann, R.T., Rohrer, G.A. 2012. A defect in dystrophin causes a novel porcine stress syndrome. Biomed Central (BMC) Genomics. 13:233.
Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs - (Peer Reviewed Journal)
Rohrer, G.A., Nonneman, D.J., Miller, R.K., Zerby, H., Moeller, S.J. 2012. Association of single nucleotide polymorphism (SNP) markers in candidate genes and QTL regions with pork quality traits in commercial pigs. Meat Science. 92(4):511-518.
Genome-wide association study of swine farrowing traits. Part II: Bayesian analysis of marker data - (Peer Reviewed Journal)
Schneider, J.F., Rempel, L.A., Snelling, W.M., Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2012. Genome-wide association study of swine farrowing traits. Part II: Bayesian analysis of marker data. Journal of Animal Science. 90(10):3360-3367.
Genome-wide association study of swine farrowing traits. Part I: Genetic and genomic parameter estimates - (Peer Reviewed Journal)
Schneider, J.F., Rempel, L.A., Rohrer, G.A. 2012. Genome-wide association study of swine farrowing traits. Part I: Genetic and genomic parameter estimates. Journal of Animal Science. 90(10):3353-3359.
Genome wide association study of age at puberty in swine - (Abstract Only)
Schneider, J.F., Nonneman, D.J., Wiedmann, R.T., Rohrer, G.A. 2012. Genome-wide association study of age at puberty in swine [abstract]. Journal of Animal Science. 90 (Supplement 3):19 (Abstract #M41).
Genome-wide association of a novel porcine stress-syndrome to dystrophin - (Abstract Only)
Nonneman, D., Brown Brandl, T., Jones, S.A., Wiedmann, R.T., Rohrer, G.A. 2012. Genome-wide association of a novel porcine stress-syndrome to dystrophin [abstract]. Plant and Animal Genome XX Conference Proceedings. Abstract #W696.
Polymorphism within thyroid hormone responsive (THRSP) associated with weaning-to-oestrus interval in swine - (Peer Reviewed Journal)
Rempel, L.A., Nonneman, D.J., Rohrer, G.A. 2012. Polymorphism within thyroid hormone responsive (THRSP) associated with weaning-to-oestrus interval in swine. Animal Genetics. 43(3):364-365.
Plenary contribution to International Conference on Boar Semen Preservation 2011. Genetic selection for freezability and its controversy with selection for performance - (Peer Reviewed Journal)
Safranski, T.J., Ford, J.J., Rohrer, G.A., Guthrie, H.D. 2011. Plenary contribution to International Conference on Boar Semen Preservation 2011. Genetic selection for freezability and its controversy with selection for performance. Reproduction of Domestic Animals. 46(Suppl. 2):31-34.
Genetic parameter estimates among scale activity score and farrowing disposition with reproductive traits in swine - (Peer Reviewed Journal)
Schneider, J.F., Rempel, L.A., Rohrer, G.A., Brown Brandl, T.M. 2011. Genetic parameter estimates among scale activity score and farrowing disposition with reproductive traits in swine. Journal of Animal Science. 89(11):3514-3521.
Current genetic technologies to improve efficiency of livestock production - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Rempel, L.A., Lents, C.A., Vallet, J.L. 2011. Current genetic technologies to improve efficiency of livestock production [abstract]. Biology of Reproduction. 85 (1 Supplement):83 (Abstract # 107).
Identification of genomic regions associated with cryptorchidism in pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Wiedmann, R.T. 2011. Identification of genomic regions associated with cryptorchidism in pigs. Proc., Swine in Biomedical Research Conference. p. 37-38.
Four genes located on a SSC2 meat quality QTL region are associated with different meat quality traits in Landrace x Chinese-European crossbred population - (Peer Reviewed Journal)
Cepica, S., Ovilo, C., Masopust, M., Knoll, A., Fernandez, A., Lopez, A., Rohrer, G.A., Nonneman, D. 2012. Four genes located on a SSC2 meat quality QTL region are associated with different meat quality traits in Landrace x Chinese-European crossbred population. Animal Genetics. 43(3):333-336.
Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population - (Peer Reviewed Journal)
Rempel, L.A., Freking, B.A., Miles, J.R., Nonneman, D.J., Rohrer, G.A., Schneider, J.F., Vallet, J.L. 2011. Association of porcine heparanase and hyaluronidase 1 and 2 with reproductive and production traits in a Landrace-Duroc-Yorkshire population. Frontiers in Livestock Genomics. 2:20.
Validation and fine mapping of a QTL for ovulation rate on swine chromosome 3 - (Peer Reviewed Journal)
Mousel, M.R., Leymaster, K.A., Christenson, R.K., Nonneman, D.J., Rohrer, G.A. 2012. Validation and fine mapping of a QTL for ovulation rate on swine chromosome 3. Animal Genetics. 43(2):220-224.
Predictive markers in calpastatin for tenderness in commercial pig populations - (Peer Reviewed Journal)
Nonneman, D.J., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Rohrer, G.A., Bierman, C.D., Schneider, J.F., Miller, R.K., Zerby, H., Moeller, S.J. 2011. Predictive markers in calpastatin for tenderness in commercial pig populations. Journal of Animal Science. 89:2663-2672.
Plenary contribution to International Conference on Boar Semen Preservation 2011: Genetic selection for freezability and its controversy with selection for performance - (Proceedings)
Analysis of feeding behavior of group housed grow-finish pigs - (Proceedings)
Brown Brandl, T.M., Rohrer, G.A., Eigenberg, R.A. 2011. Analysis of feeding behavior of group housed grow-finish pigs. In: Proceeding of the European Conference on Precision Agriculture Proceedings, July 11-14, 2011, Prague, Czech. p. 191-204.
Genomic regions associated with kyphosis in swine - (Peer Reviewed Journal)
Lindholm-Perry, A.K., Rohrer, G.A., Kuehn, L.A., Keele, J.W., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Nonneman, D.J. 2010. Genomic regions associated with kyphosis in swine. BMC Genetics. 11:112.
Genetics of sow behavior: Associations with reproductive performance and perspectives toward loose sow housing - (Other)
Schneider, J., Rempel, L., Rohrer, G., Brown Brandl, T. 2010. Genetics of sow behavior: Associations with reproductive performance and perspectives toward loose sow housing [PowerPoint]. Record of Proceedings of National Swine Improvement Federation. NSIF Volume 35. Available at: http://www.nsif.com/conferences/2010/contents.html
Genome-wide associations for age at puberty in a Duroc-Landrace-Yorkshire swine population - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Rempel, L.A., Wiedmann, R.T., Vallet, J.L. 2011. Genome-wide associations for age at puberty in a Duroc-Landrace-Yorkshire swine population. Plant and Animal Genome Conference Proceedings. Poster #P609.
Strategies to build high-density linkage maps of the porcine 60k SNP chip - (Abstract Only)
Tortereau, F., Servin, B., Beever, J., Archibald, A., Rohrer, G.A., Milan, D., Schook, L., Groenen, M.A. 2011. Strategies to build high-density linkage maps of the porcine 60k SNP chip. Plant and Animal Genome Conference Proceedings. Abstract P600.
Porcine insulin receptor substrate 4 (IRS4) gene: cloning, polymorphism and association study - (Peer Reviewed Journal)
Masopust, M., Vykoukalova, Z., Knoll, A., Bartenschlager, H., Mileham, A., Deeb, N., Rohrer, G.A., Cepica, S. 2011. Porcine insulin receptor substrate 4 (IRS4) gene: cloning, polymorphism and association study. Molecular Biology Reports. 38:2611-2617.
QTL associations for weaning-to-estrus interval in a Landrace-Duroc-Yorkshire swine population - (Abstract Only)
Rempel, L.A., Wiedmann, R.T., Nonneman, D.J., Rohrer, G.A. 2011. QTL associations for weaning-to-estrus interval in a Landrace-Duroc-Yorkshire swine population [abstract]. Plant and Animal Genome Conference Proceedings. (XIX Conference):Abstract P607.
Genome-wide association of a novel porcine stress-syndrome and isoflurane sensitivity to dystrophin - (Abstract Only)
Nonneman, D.J., Brown Brandl, T.M., Jones, S., Rohrer, G.A. 2010. Genome-wide association of a novel porcine stress-syndrome and isoflurane sensitivity to dystrophin. Journal of Animal Science. 88(ESuppl. 2):II Abstract #LB5.
Genetic Parameter Estimates Among Scale Activity Score and Farrowing Disposition with Reproductive Traits in Swine - (Proceedings)
Schneider, J.F., Rempel, L.A., Rohrer, G.A., Brown Brandl, T.M. 2010. Genetic Parameter Estimates Among Scale Activity Score and Farrowing Disposition with Reproductive Traits in Swine. Proceedings of the 9th World Congress on Genetics Applied to Livestock Production, Leipzig, Germany. August 1-6, 2010. CD-ROM Communication No. PP2-180.
Molecular cloning of porcine chemokine CXC motif ligand 2 (CXCL2) and mapping to the SSC8 - (Abstract Only)
Kim, J.G., Rohrer, G.A., Nonneman, D., Vallet, J.L. 2010. Molecular cloning of porcine chemokine CXC motif ligand 2 (CXCL2) and mapping to the SSC8 [abstract]. Biology of Reproduction. 83 (Special Issue):79 (Abstract # 351).
Porcine NAMPT gene: search for polymorphism, mapping and association studies - (Peer Reviewed Journal)
Cepica, S., Bartenschlager, H., Ovilo, C., Zrustova, J., Masopust, M., Fernandez, A., Lopez, A., Knoll, A., Rohrer, G.A., Snelling, W.M., Geldermann, H. 2010. Porcine NAMPT gene: search for polymorphism, mapping and association studies. Animal Genetics. 41:646-651.
Screening and Characterization of Spontaneous Porcine Congenital Heart Defects for Gene Identification and Models of Human Disease - (Abstract Only)
Metlay, L.A., Goldman, B.I., Cassady, J., Miles, J.R., Rohrer, G.A., Vallet, J.L., Ackerman, K.G. 2010. Screening and Characterization of Spontaneous Porcine Congenital Heart Defects for Gene Identification and Models of Human Disease [abstract]. Society for Pediatric Pathology Spring Meeting, Washington, D.C., 3/20-21/2010. #27. (available: http://www.spponline.org/2010-1SpringMtg/FullAbstractsAcceptedPresentationOrder.pdf)
Association of Allelic Variants of Thyroid-Binding Globulin With Puberty in Boars and Responses to Hemicastration - (Peer Reviewed Journal)
Ford, J.J., Rohrer, G.A., Nonneman, D.J., Lunstra, D.D., Wise, T.H. 2010. Association of Allelic Variants of Thyroid-Binding Globulin With Puberty in Boars and Responses to Hemicastration. Animal Reproduction Science. 119(3-4):228-234.
Association of Functional SNPs in Pig Calpastatin Regulatory Regions with Tenderness - (Abstract Only)
Nonneman, D.J., Lindholm-Perry, A.K., Shackelford, S.D., King, D.A., Wheeler, T.L., Rohrer, G.A., Bierman, C., Miller, R.K., Zerby, H., Moeller, S.J. 2010. Association of Functional SNPs in Pig Calpastatin Regulatory Regions with Tenderness. Proc., Midwestern Section of the American Society of Animal Science Meeting. March 15-17, 2010. Des Moines, IA. Abstract #34. p. 11-12.
Association of Single Nucleotide Polymorphism (SNP) Markers in Candidate Genes and QTL Regions with Pork Quality in Commercial Pigs - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Miller, R.K., Zerby, H., Moeller, S.J. 2010. Association of Single Nucleotide Polymorphism (SNP) Markers in Candidate Genes and QTL Regions with Pork Quality in Commercial Pigs. Proc., Midwestern Section of the American Society of Animal Science Meeting. Abstract #33. p. 11.
Allele-Specific Transcription Factor Binding in Pig Calpastatin Promoter Regions - (Abstract Only)
Nonneman, Dan J., Lindholm-Perry, Amanda K., Shackelford, Steven D., King, D.Andy, Wheeler, Tommy L., Rohrer, Gary A. 2010. Allele-Specific Transcription Factor Binding in Pig Calpastatin Promoter Regions. Plant and Animal Genome Conference Proceedings XVIII. 1/9-13/2010. San Diego, CA. Abstract #P607.
Characterization of Conserved and Nonconserved Imprinted Genes in Swine - (Abstract Only)
Freking, B.A., Bischoff, S.R., Tsai, S., Hardison, N., Motsinger-Reif, A.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2010. Characterization of Conserved and Nonconserved Imprinted Genes in Swine [abstract]. Plant and Animal Genome XVIII Conference. Abstract No. W024. Available: http://www.intl-pag.org/18/abstracts/W04_PAGXVIII_024.html
Estimates of genetic parameters among scale activity scores, growth, and fatness in pigs - (Peer Reviewed Journal)
Holl, J.W., Rohrer, G.A., Brown Brandl, T.M. 2010. Estimates of Genetic Parameters Among Scale Activity Scores, Growth, and Fatness in Pigs. Journal of Animal Science. 88:455-459.
SNP Detection in the Porcine PPARGC1A Promoter Region and 3'UTR, and an Association Analysis in a Landrace-Duroc-Yorkshire Population - (Peer Reviewed Journal)
Erkens, T., Rohrer, G.A., Van Zeveren, A., Peelman, L.J. 2009. SNP Detection in the Porcine PPARGC1A Promoter Region and 3'UTR, and an Association Analysis in a Landrace-Duroc-Yorkshire Population. Czech Journal of Animal Science. 54(9):408-416.
Quantitative Genomics of Male Reproduction - (Book / Chapter)
Casas, E., Ford, J.J., Rohrer, G.A. 2010. Quantitative Genomics of Male Reproduction. In: Jiang, Z., and Ott, T. L., Editors. Reproductive Genomics in Domestic Animals. Ames, IA:Wiley-Blackwell. p. 53-66.
Association Analyses of Candidate SNP on Reproductive and Production Traits in Swine - (Peer Reviewed Journal)
Rempel, L.A., Nonneman, D.J., Wise, T.H., Erkens, T., Peelman, L.J., Rohrer, G.A. 2010. Association Analyses of Candidate Single Nucleotide Polymorphisms on Reproductive Traits in Swine. Journal of Animal Science. 88:1-15.
Characterization of Conserved and Non-conserved Imprinted Genes in Swine - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S., Hardison, N., Motsinger-Reif, A.A., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2009. Characterization of Conserved and Non-conserved Imprinted Genes in Swine. Biology of Reproduction. 81(5):906-920.
Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology - (Peer Reviewed Journal)
Ramos, A.M., Crooijmans, R.P.M.A., Affara, N.A., Amaral, A.J., Archibald, A.L., Beever, J.E., Bendixen, C., Churcher, C., Clark, R., Dehais, P., Hansen, M.S., Hedegaard, J., Hu, Z.L., Kerstens, H.H., Law, A.S., Megens, H.J., Milan, D., Nonneman, D.J., Rohrer, G.A., Rothschild, M.F., Smith, T.P.L., Schnabel, R.D., Van Tassell, C.P., Taylor, J.F., Wiedmann, R.T., Schook, L.B., Groenen, M.A.M. 2009. Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology. PLoS One 4(8):E6524. p. 1-13.
Prepubertal Scoring of Scale Activity in Gilts and Its Potential Relationship to Subsequent Fertility and Reproductive Performance in Landrace-Duroc-Yorkshire Cross Females - (Abstract Only)
Rempel, L.A., Rohrer, G.A., Brown-Brandl, T. 2009. Prepubertal Scoring of Scale Activity in Gilts and Its Potential Relationship to Subsequent Fertility and Reproductive Performance in Landrace-Duroc-Yorkshire Cross Females [abstract]. Proceedings of VIIIth International Conference on Pig Reproduction, Banff, Alberta, Canada, p. 177.
Relationships among calpastatin single nucleotide polymorphisms, calpastatin expression and tenderness in pork longissimus - (Peer Reviewed Journal)
Lindholm-Perry, A.K., Rohrer, G.A., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M., Nonneman, D.J. 2009. Relationships among calpastatin single nucleotide polymorphisms, calpastatin expression and tenderness in pork longissimus. Animal Genetics. 40(5):713-721.
Positional candidate genes for kyphosis in commercial swine populations - (Abstract Only)
Lindholm-Perry, A.K., Rohrer, G.A., Keele, J.W., Holl, J.W., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M., Nonneman, D.J. 2009. Positional Candidate Genes for Kyphosis in Commercial Swine Populations. Proc., Plant and Animal Genome Conference XVII. 1/10-14/2009, San Diego, CA. P529.
Design of the Illumina Porcine 50K+ SNP Iselect(TM) Beadchip and Characterization of the Porcine HapMap Population - (Abstract Only)
Groenen, M.A., Crooijmans, R.P., Ramos, A.M., Amaral, A.J., Kerstens, H., Bendixen, C., Hedegaard, J., Rohrer, G.A., Smith, T.P., Van Tassell, C.P., Taylor, J.F., Rothschild, M., Hu, Z., Nonneman, D.J., Beever, J., Archibald, A., Law, A., Milan, D., Hansen, M., Schook, L. 2009. Design of the Illumina Porcine 50K+ SNP Iselect(TM) Beadchip and Characterization of the Porcine HapMap Population. Plant and Animal Genome Conference Proceedings. 1/10-14/09, San Diego, CA. Abstract W493.
Characterization and linkage mapping of 15 porcine STS markers to fine-map chromosomal regions associated with hernia inguinalis/scrotalis - (Peer Reviewed Journal)
Germerodt, M., Beuermann, C., Rohrer, G.A., Snelling, W.M., Brenig, B., Knorr, C. 2008. Characterization and linkage mapping of 15 porcine STS markers to fine-map chromosomal regions associated with hernia inguinalis/scrotalis. Animal Genetics 39:671-672.
High throughput SNP discovery and validation in the pig: towards the development of a high density swine SNP chip - (Abstract Only)
Ramos, A.M., Crooijmans, R.P., Fonseca, A., Kerstens, H., Bendixen, C., Hedegaard, J., Rohrer, G.A., Smith, T.P., Van Tassell, C.P., Taylor, J.F., Rothschild, M., Nonneman, D.J., Beever, J., Archibald, A., Schook, L., Groenen, M.A. 2008. High throughput SNP discovery and validation in the pig: towards the development of a high density swine SNP chip. Proc., 2nd European Conference on Pig Genomics, June 4-5, 2008, Ljubljana, Slovenia. Poster #2234.
Approaching porcine hernia inguinalis/scrotalis - (Abstract Only)
Germerodt, M., Beuermann, C., Beck, J., Schuetz, E., Rohrer, G.A., Brenig, B., Knorr, C. 2008. Approaching porcine hernia inguinalis/scrotalis. Proc., 2nd European Conf. on Pig Genomics, June 4-5, 2008, Ljubljana, Slovenia. ISBN ID: 978-961-6379-12-0, Pg. 49.
Genetic variation in the mannosidase 2B2 gene and its association with ovulation rate in pigs. - (Peer Reviewed Journal)
Campbell, E.M., Nonneman, D.J., Kuehn, L.A., Rohrer, G.A. 2008. Genetic variation in the mannosidase 2B2 gene and its association with ovulation rate in pigs. Animal Genetics. 39:515-519.
Estimates of genetic parameters for kyphosis in two crossbred swine populations - (Peer Reviewed Journal)
Holl, J.W., Rohrer, G.A., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2008. Estimates of genetic parameters for kyphosis in two crossbred swine populations. Journal of Animal Science. 86:1765-1769.
Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays - (Peer Reviewed Journal)
Bischoff, S.R., Tsai, S., Hardison, N.E., York, A.M., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2008. Identification of SNPs and INDELS in swine transcribed sequences using short oligonucleotide microarrays. Biomed Central (BMC) Genomics 9:252.
Association analysis of candidate SNPs on reproductive traits in swine - (Abstract Only)
Rempel, L.A., Holl, J.W., Rohrer, G.A. 2008. Association analysis of candidate SNPs on reproductive traits in swine. Journal of Animal Science 86(E-Suppl. 2):209. (Abstract W51)
Update on genetic markers for pork quality - (Proceedings)
Rohrer, G.A., Holl, J.W., Lindholm-Perry, A.K., Nonneman, D.J., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2007. Update on genetic markers for pork quality. Conference Proc., National Swine Improvement Federation Conference & Ann. Mtg., Dec. 5-7, 2007. Kansas City, MO, NSIF Volume 32, www.nsif.com
Evidence of Allelic Suppression for Transcripts Expressed in Day 30 Pig Embryos by SNP Genotyping - (Abstract Only)
Freking, B.A., Nonneman, D.J., Rohrer, G.A., Bischoff, S.R., Tsai, S., Piedrahita, J.A. 2008. Evidence of allelic suppression for transcripts expressed in day 30 pig embryos by SNP genotyping [abstract]. Journal of Animal Science. 86(E-Suppl. 3):51. Abstract #44.
Genetic parameters for kyphosis in pork carcasses - (Abstract Only)
Holl, J.W., Rohrer, G.A., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2008. Genetic parameters for kyphosis in pork carcasses [abstract]. Journal of Animal Science. 86(E-Suppl. 3):48. Abstract #32.
Genetic relationships among temperament score, weight, and backfat measurements in pigs - (Abstract Only)
Holl, J.W., Rohrer, G.A., Brown Brandl, T.M. 2008. Genetic relationships among temperament score, weight, and backfat measurements in pigs [abstract]. Journal of Animal Science. 86(E-Suppl. 3):47. Abstract #31.
Integrating the USMARC genetic map for the pig with the pig physical map - (Abstract Only)
Wiedmann, R.T., Freking, B.A., Nonneman, D.J., Snelling, W.M., Keele, J.W., Harhay, G.P., Rohrer, G.A. Integrating the USMARC genetic map for the pig with the pig physical map. 2008. Annual International Plant & Animal Genome Conference. Poster No. P565, pg 259.
A high utility integrated map of the pig genome - (Peer Reviewed Journal)
Humphray, S.J., Scott, C.E., Clark, R., Marron, B., Bender, C., Camm, N., Davis, J., Jenks, A., Noon, A., Patel, M., Sehra, H., Yang, F., Rogatcheva, M.B., Milan, D., Chardon, P., Rohrer, G., Nonneman, D., de Jong, P., Meyers, S.N., Archibald, A., Beever, J.E., Schook, L.B., Rogers, J. 2007. A high utility integrated map of the pig genome. Genome Biology. 8(7):R139.
Single Nucleotide Polymorphisms for Pig Identification and Parentage Exclusion - (Peer Reviewed Journal)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2007. Single nucleotide polymorphisms for pig identification and parentage exclusion. Animal Genetics. 38:253-258.
Detection of Single Nucleotide Polymorphisms Associated with Ultrasonic Backfat Depth in a Segregating Meishan x White Composite Population - (Peer Reviewed Journal)
Kuehn, L.A., Rohrer, G.A., Nonneman, D.J., Thallman, R.M., Leymaster, K.A. 2007. Detection of single nucleotide polymorphisms associated with ultrasonic backfat depth in a segregating Meishan x White Composite population. Journal of Animal Science. 85:1111-1119.
Detection of transcriptional difference of porcine imprinted genes using different microarray platforms - (Peer Reviewed Journal)
Tsai, S., Mir, B., Martin, A.C., Estrada, J.L., Bischoff, S.R., Hsieh, W., Cassady, J.P., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. (BMC) Genomics. 7:328.
Sequencing the Pig Genome Using a Mapped BAC by BAC Approach - (Abstract Only)
Humphray, S.J., Scott, C., Clark, R., Marron, B., Plumb, R., Bender, C., Camm, N., Davis, J., Jenks, A., Noon, A., Patel, M., Sehra, H., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J., De Jong, P., Meyers, S., Archibald, A., Beever, J., Schook, L., Rogers, J. 2007. Sequencing the pig genome using a mapped BAC by BAC approach. Plant and Animal Genome Conference Proceedings. Abstract P34, p. 110.
Logistic regression analysis to predict weaning-to-estrous interval in first-litter gilts - (Abstract Only)
Wang, Y., Wise, T.H., Rohrer, G.A., Hanford, K.J., Van Vleck, L.D. 2007. Logistic regression analysis to predict weaning-to-estrous interval in first-litter gilts [abstract]. Journal of Animal Science. 85 (Supplement 2):62. (Abstract #46)
Fine-mapping QTL for nipple number in the pig - (Abstract Only)
Nonneman, D.J., Kuehn, L.A., Rohrer, G.A. 2007. Fine-mapping QTL for nipple number in the pig [abstract]. Plant and Animal Genome XV Conference. Poster No. P579.
An updated USMARC genetic map for the pig integrated with the pig physical map - (Abstract Only)
Rohrer, G.A., Snelling, W.M., Freking, B.A., Nonneman, D.J., Harhay, G.P., Keele, J.W. 2007. An updated USMARC genetic map for the pig integrated with the pig physical map [abstract]. Plant and Animal Genome XV Conference. Poster No. W421.
LINKAGE AND RH MAPPING OF 10 GENES TO A QTL REGION FOR FATNESS AND MUSCLING TRAITS ON PIG CHROMOSOME X - (Peer Reviewed Journal)
Cepica, S., Masopust, M., Knoll, A., Bartenschlager, H., Yerle, M., Rohrer, G.A., Gelderman, H. 2006. Linkage and RH mapping of 10 genes to a QTL region for fatness and muscling traits on pig chromosome X. Animal Genetics. 37:603-604.
Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10: possible associations with reproductive traits - (Peer Reviewed Journal)
Nonneman, D.J., Wise, T.H., Ford, J.J., Kuehn, L.A., Rohrer, G.A. 2006. Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10: possible associations with reproductive traits. Biomed Central (BMC) Veterinary Research. 2:28. 2006.
A LINEAR MIXED MODEL APPROACH TO IDENTIFYING EXPRESSED SINGLE FEATURE POLYMORPHISMS - (Abstract Only)
Bischoff, S.R., Tsai, S., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2006. A linear mixed model approach to identifying expressed single feature polymorphisms [abstract]. International Mammalian Genome Society (IMGS) Annual Meeting, Charleston, SC, November, 2006. Abstract #P12.
CHARACTERIZATION OF THE ALDO-KETO REDUCTASE 1C GENE CLUSTER ON PIG CHROMOSOME 10 AND ASSOCIATION WITH AGE OF PUBERTY AND OVULATION RATE - (Abstract Only)
Nonneman, D.J., Wise, T.H., Ford, J.J., Rohrer, G.A. 2006. Characterization of the aldo-keto reductase 1C gene cluster on pig chromosome 10 and association with age of puberty and ovulation rate. (Abstract) Animal Genetics International Conference Proceedings. p. 88. Abstract #D277.
DECIPHERING THE PIG GENOME TO UNDERSTAND GAMETE PRODUCTION - (Book / Chapter)
Rohrer, G.A., Wise, T.H., Ford, J.J. Deciphering the pig genome to understand gamete production. IN: Control of Pig Reproduction VII. C.J. Ashworth & R.R. Kraeling (Eds) Nottingham University Press. Proc. 7th Intl. Conference on Pig Reproduction, Society of Reprod. & Fertility, Suppl. 62:293-301. 2006
IDENTIFICATION OF SINGLE NUCLEOTIDE POLYMORPHISMS IN PIG SEQUENCE TAGGED-SITES - (Abstract Only)
Ernst, C.W., Rilington, V.D., Raney, N.E., Venta, P.J., Housley, D.J., Rohrer, G.A., Choi, I., Thorn, S.R. 2006. Identification of single nucleotide polymorphisms in pig sequence tagged-sites. (Abstract) Animal Genetics International Conference Proceedings. p. 59. Abstract #B503.
DETECTION OF SINGLE NUCLEOTIDE POLYMORPHISMS ON PORCINE CHROMOSOME 7 ASSOCIATED WITH ULTRASONIC BACKFAT IN A SEGREGATING MEISHAN X WHITE CROSS POPULATION USING A MODEL WITH POLYGENIC EFFECTS - (Abstract Only)
Kuehn, L.A., Rohrer, G.A., Nonneman, D.J., Thallman, R.M., Leymaster, K.A. 2006. Detection of single nucleotide polymorphisms on porcine chromosome 7 associated with ultrasonic backfat in a segregating Meishan x White Cross population using a model with polygenic effects. (Abstract) Animal Genetics International Conference Proceedings. p. 104. Abstract #E353.
SEQUENCING THE PIG GENOME USING A BAC BY BAC APPROACH - (Abstract Only)
Humphray, S., Scott, C., Clark, R., Marron, B., Jones, M., Plumb, R., Sims, S., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J., De Jong, P., Meyers, S., Archibald, A., Beever, J., Schook, L., Rogers, J. 2006. Sequencing the pig genome using a BAC by BAC approach. (Abstract) Animal Genetics International Conference Proceedings. p. 56. Abstract #B404.
Allelic variation in porcine resistin (RETN) gene is associated with fatness traits in a Wild Boar x Meishan reference family - (Abstract Only)
Cepica, S., Knoll, A., Masopust, M., Vykoukalova, Z., Bartenschlager, H., Nonneman, D.J., Rohrer, G.A., Geldermann, H. 2006. Allelic variation in porcine resistin (RETN) gene is associated with fatness traits in a Wild Boar x Meishan reference family. Proc., 30th International Conference on Animal Genetics Abstract #C310, p. 72.
MOLECULAR CLONING OF PORCINE OGT CDNA AND MAPPING TO THE X CHROMOSOME - (Abstract Only)
Kim, J.G., Ford, J.J., Rohrer, G.A., Nonneman, D.J. 2006. Molecular cloning of porcine OGT cDNA and mapping to the X chromosome [abstract]. Biology of Reproduction. Supplement:154.
REARRANGED GENE ORDER BETWEEN PIG AND HUMAN IN A QUANTITATIVE TRAIT LOCI REGION ON SSC3 - (Peer Reviewed Journal)
Mousel, M.R., Nonneman, D.J., Rohrer, G.A. 2006. Rearranged gene order between pig and human in a quantitative trait loci region on SSC3. Animal Genetics. 37:403-406
SEQUENCE VARIATION AND EVALUATION OF INHIBIN ALPHA-SUBUNIT AND STEROIDOGENIC ACUTE REGULATORY PROTEIN FOR REPRODUCTIVE TRAITS IN SWINE - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Vallet, J.L., Wise, T.H., Rohrer, G.A. Sequence variation and evaluation of inhibin alpha-subunit and steroidogenic acute regulatory protein for reproductive traits in swine. Animal Genetics. 37:424-425. 2006.
ANNOTATION OF THE AFFYMETRIX PORCINE GENOME MICROARRAY - (Peer Reviewed Journal)
Tsai, S., Cassady, J.P., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J.A. 2006. Annotation of the affymetrix porcine genome microarray. Animal Genetics. 37:423-424.
EFFECTS OF PHYSIOLOGICAL TRAITS ON WEANING-TO-ESTROUS INTERVAL IN FIRST-LITTER GILTS - (Abstract Only)
Wang, Y., Wise, T.H., Rohrer, G.A., Hanford, K.J., Van Vleck, L.D. 2006. Effects of physiological traits on weaning-to-estrous interval in first-litter gilts [abstract]. Journal of Animal Science. 84 (Supplement 1):269. (Abstract #328)
RADIATION HYBRID MAPPING OF 18 POSITIONAL AND PHYSIOLOGICAL CANDIDATE GENES FOR ARTHROGRYPOSIS MULTIPLEX CONGENITA ON PORCINE CHROMOSOME 5 - (Peer Reviewed Journal)
Genini, S., Nguyen, T.T., Malek, M., Talbot, R., Gebert, S., Rohrer, G.A., Nonneman, D.J., Stranzinger, G., Vogeli, P. 2006. Radiation hybrid mapping of 18 positional and physiological candidate genes for arthrogryposis multiplex congenita on porcine chromosome 5. Animal Genetics. 37:239-244.
CHARACTERIZATION OF THE PGK2 ASSOCIATED MICROSATELLITE S0719 ON SSC7 SUITABLE FOR PARENTAGE AND QTL DIAGNOSIS - (Peer Reviewed Journal)
Chen, K., Knorr, C., Bornemann-Kolatzki, K., Huang, L., Rohrer, G.A., Brenig, B. 2006. Characterization of the PGK2 associated microsatellite S0719 on SSC7 suitable for parentage and QTL diagnosis. Animal Biotechnology. 17:43-49
VALIDATION OF QTL FOR REPRODUCTIVE TRAITS IN ADVANCED GENERATIONS OF A MEISHAN CROSS POPULATION - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Wise, T.H., Ford, J.J. 2006. Validation of QTL for reproductive traits in advanced generations of a Meishan cross population. Proc., Plant and Animal Genome XIV, 1/14-18/2006. San Diego, CA, Poster #P577, p. 245.
LACK OF ASSOCIATION OF CALPASTATIN HAPLOTYPES WITH MEAT QUALITY IN A DUROC-LANDRACE SWINE RESOURCE POPULATION - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2005. Lack of association of calpastatin haplotypes with meat quality in a Duroc-Landrace swine resource population. Proc., Midwestern Section of the American Society of Animal Science. Abstract #38. p. 9.
ANNOTATION OF AFFYMETRIX PORCINE GENOME MICROARRAY CHIP - (Abstract Only)
Tsai, S., Weir, B., Cassady, J., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Annotation of affymetrix porcine genome microarray chip. Plant and Animal Genome Conference Proceedings. Poster #P768. p. 292.
AN INTEGRATED BAC PHYSICAL MAP OF THE PIG GENOME AND SELECTION OF THE MINIMUM TILEPATH - (Abstract Only)
Humphray, S., Scott, C., Clark, R., Marron, B., Plumb, R., Rogatcheva, M., Milan, D., Chardon, P., Rohrer, G.A., Nonneman, D.J. 2006. An integrated BAC physical map of the pig genome and selection of the minimum tilepath. Plant and Animal Genome Conference Proceedings. Poster #W237. p. 60.
TARGETED OLIGONUCLEOTIDE-MEDIATED MICROSATELLITE IDENTIFICATION (TOMMI) FROM LARGE-INSERT LIBRARY CLONES - (Peer Reviewed Journal)
Chen, K., Knorr, C., Bornemann-Kolatzki, K., Ren, J., Huang, L., Rohrer, G.A., Bertram, B. 2005. Targeted oligonucleotide-mediated microsatellite identification (tommi) from large-insert library clones. BMC Genetics 6:54.
MICROARRAY PLATFORM COMPARISON FOR PORCINE GENE EXPRESSION STUDIES - (Abstract Only)
Tsai, S., Mir, B., Martin, A., Estrada, J., Bischoff, S., Cassady, J., Weir, B., Freking, B.A., Nonneman, D.J., Rohrer, G.A., Piedrahita, J. 2006. Microarray platform comparison for porcine gene expression studies. Plant and Animal Genome Conference Proceedings. Poster #W241. p. 61.
USE OF PORCINE PARTHENOTES AND GENE EXPRESSION PROFILING USING MICROARRAYS FOR IDENTIFICATION OF IMPRINTED GENES - (Abstract Only)
Piedrahita, J.A., Bischoff, S.R., Estrada, J.L., Freking, B.A., Nonneman, D.J., Martin, A.C., Mir, B., Rohrer, G.A., Tsai, S. 2006. Use of porcine parthenotes and gene expression profiling using microarrays for identification of imprinted genes [abstract]. Proceedings of the 32nd International Conference of the International Embryo Transfer Society (IETS), January 8-10, 2006, Orlando, FL. Page 239.
ASSIGNMENT OF 12 GENES TO PORCINE CHROMOSOME 1Q BY LINKAGE AND RADIATION HYBRID MAPPING - (Peer Reviewed Journal)
Nonneman, D.J., Smith, T.P., Freking, B.A., Rohrer, G.A. 2005. Assignment of 12 genes to porcine chromosome 1q by linkage and radiation hybrid mapping. Anim. Genet. 36:532-533. 2005.
GENETIC VARIATION IN SPERM PRODUCTION - (Review Article)
Ford, J.J., McCoard, S.A., Wise, T.H., Lunstra, D.D., Rohrer, G.A. 2006. Genetic variation in sperm production. In: Ashworth, C.J., Kraeling, R.R., editors. Control of Pig Reproduction VII. Proceedings of the Seventh International Conference on Pig Reproduction, June 12-15, 2005, Kerkrade, The Netherlands. Society of Reproduction and Fertility Supplement 62:99-112.
A GENOME SCAN FOR LOCI AFFECTING PORK QUALITY IN A DUROC-LANDRACE F2 POPULATION - (Peer Reviewed Journal)
Rohrer, G.A., Thallman, R.M., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2005. A genome scan for loci affecting pork quality in a Duroc-Landrace F2 population. Animal Genetics. 37:17-27.
ASSIGNMENT OF 204 GENES LOCALIZED ON HSA17 TO A PORCINE RH (IMPRH) MAP TO GENERATE A DENSE COMPARATIVE MAP BETWEEN PIG AND HUMAN/MOUSE - (Peer Reviewed Journal)
Shimogiri, T., Kiuchi, S., Hiraiwa, H., Hayashi, T., Takano, Y., Yoshizane, M., Rohrer, G.A., Milan, D., Yasue, H. Assignment of 204 genes localized on hsa17 to a porcine rh (imprh) map to generatate a dense comparative map between pig and human/mouse. Cytogenetics and Genome Research. 112:114-120. 2006.
GENETIC VARIATION IN SPERM PRODUCTION - (Abstract Only)
Ford, J.J., McCoard, S.A., Wise, T.H., Lunstra, D.D., Rohrer, G.A. 2005. Genetic variation in sperm production [abstract]. 7th International Conference on Pig Reproduction, June 12-15, 2005, Kerkrade, The Netherlands. p. 51.
SWINE GENOME SEQUENCING CONSORTIUM (SGSC): A STRATEGIC ROADMAP FOR SEQUENCING THE PIG GENOME - (Peer Reviewed Journal)
Schook, L.B., Beever, J.E., Rogers, J., Humphray, S., Archibald, A., Chardon, P., Milan, D., Rohrer, G.A., Eversole, K. 2005. Swine Genome Sequencing Consortium (SGSC): A strategic roadmap for sequencing the pig genome. Comparative and Functional Genomics. 6:251-255.
BRIEF NOTE. CHARACTERIZATION AND LINKAGE MAPPING OF FOUR GENE-ASSOCIATED PORCINE MICROSATELLITES - (Peer Reviewed Journal)
Leeb, T., Rohrer, G.A. 2005. Brief note. characterization and linkage mapping of four gene-associated porcine microsatellites. Animal Genetics. 36:279-280.
LINKAGE AND RH MAPPING OF THE PORCINE ADIPONECTIN GENE ON CHROMOSOME 13 - (Peer Reviewed Journal)
Cepica, S., Masopust, M., Knoll, A., Rohrer, G.A. 2005. Linkage and RH mapping of the porcine adiponectin gene on chromosome 13. Animal Genetics. 36:276-277. 2005
FINE MAPPING OF A QTL IN A SWINE POPULATION SELECTED FOR OVULATION RATE - (Abstract Only)
Mousel, M.R., Rohrer, G.A., Leymaster, K.A., Christenson, R. 2005. Fine mapping of a QTL in a swine population selected for ovulation rate. Journal of Animal Science 83(Suppl. 1):231-232.
PORCINE PPARGC1A (PEROXISOME PROLIFERATIVE ACTIVATED RECEPTOR GAMMA COACTIVATOR 1A): CODING SEQUENCE, GENOMIC ORGANIZATION, POLYMORPHISMS AND MAPPING - (Peer Reviewed Journal)
Jacobs, K., Rohrer, G.A., Van Poucke, M., Piumi, F., Yerle, M., Barthenschlager, H., Mattheeuws, M., Van Zeveren, A., Peelman, L. 2006. Porcine PPARGC1A (peroxisome proliferative activated receptor gamma coactivator 1a): coding sequence, genomic organization, polymorphisms and mapping. Cytogenetics and Genome Research. 112:106-113.
(BRIEF NOTE) LINKAGE MAPPING OF THE PORCINE CHROMOGRANIN B (CHGB) GENE TO CHROMOSOME 17 - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2005. (Brief Note) Linkage mapping of the porcine chromogranin B (CHGB) gene to chromosome 17. Animal Genetics. 36(2):168.
A REFINED COMPARATIVE MAP BETWEEN PORCINE CHROMOSOME 3 AND HUMAN CHROMOSOMES 2, 7 AND 16 - (Peer Reviewed Journal)
Mousel, M.R., Nonneman, D.J., Rohrer, G.A. A refined comparative map between porcine chromosome 3 and human chromosomes 2, 7 and 16. Proc., Midwestern Section of the American Society of Animal Science. p. 11. 2005
AN OVERVIEW OF GENOMICS RESEARCH AND ITS IMPACT ON LIVESTOCK REPRODUCTION - (Peer Reviewed Journal)
ROHRER, G.A. AN OVERVIEW OF GENOMICS RESEARCH AND ITS IMPACT ON LIVESTOCK REPRODUCTION. REPRODUCTION, FERTILITY AND DEVELOPMENT. 16:47-54. 2004.
(BRIEF NOTE) LINKAGE MAPPING OF THE PORCINE MYELIN BASIC PROTEIN (MBP) GENE TO CHROMOSOME 1 - (Peer Reviewed Journal)
Kim, J.G., Nonneman, D.J., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2005. (Brief note) Linkage mapping of the porcine myelin basic protein gene to chromosome 1. Animal Genetics. 36(2):163-164.
SINGLE NUCLEOTIDE POLYMORPHISMS FOR PIG IDENTIFICATION AND PARENTAGE EXCLUSION - (Abstract Only)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2005. Single nucleotide polymorphisms for pig identification and parentage exclusion. Proc., Plant & Animal Genome XIII, San Diego, CA. P203. p. 125.
COMPARATIVE MAPPING BETWEEN THE PIG (SUS SCROFA) AND HUMAN - (Abstract Only)
Young, J.M., Ashwell, M.S., Rohrer, G.A., Smith, A.L., Cassady, J.P. 2005. Comparative mapping between the pig (sus scrofa) and human. Proc., Plant & Animal Genome XIII, San Diego, CA. P557. p. 210.
PERSPECTIVES FOR ARTIFICIAL INSEMINATION AND GENOMICS TO IMPROVE GLOBAL SWINE POPULATIONS - (Peer Reviewed Journal)
Gerrits, R.J., Lunney, J.K., Johnson, L.J., Pursel, V.G., Kraeling, R.R., Rohrer, G.A., Dobrinsky, J.R. 2004. Perspectives for artificial insemination and genomics to improve global swine populations. Theriogenology. 63:283-299.
A VARIANT OF PORCINE THYROXINE-BINDING GLOBULIN HAS REDUCED AFFINITY FOR THYROXINE AND IS ASSOCIATED WITH TESTIS SIZE - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A., Wise, T.H., Lunstra, D.D., Ford, J.J. 2005. A variant of porcine thyroxine-binding globulin has reduced affinity for thyroxine and is associated with testis size. Biology of Reproduction. 72:214-220.
ADDITION OF FOURTEEN ANCHORED LOCI TO THE PORCINE CHROMOSOME 8 COMPARATIVE MAP - (Peer Reviewed Journal)
Kim, J.G., Rohrer, G.A., Vallet, J.L., Christenson, R.K., Nonneman, D. 2004. Addition of 14 anchored loci to the porcine chromosome 8 comparative map. Animal Genetics. 35(6):474-476.
BRIEF NOTE. LINKAGE MAPPING OF THE MC3R GENE TO PORCINE CHROMOSOME 17 - (Research Notes)
Civanova, K., Knoll, A., Rohrer, G.A., Cepica, S. 2004. Linkage mapping of the MC3R gene to porcine chromosome 17. Animal Genetics. 35:467-469.
GENOMICS - (Book / Chapter)
Rohrer, G.A. 2005. Genomics. Encyclopedia of Animal Science. Marcel Dekker, Inc., NY. Wilson G. Pond & Alan W. Bell (eds.) p. 469-471.
GENE MAPPING - (Book / Chapter)
Rohrer, G.A. 2005. Gene mapping. Encyclopedia of Animal Science. Marcel Dekker, Inc., NY. Wilson G. Pond & Alan W. Bell (eds.). p. 459-462.
A COMPARISON OF THE UTILITY OF SNPS DISCOVERED BY DIFFERENT METHODS - (Abstract Only)
Grosz, M.D., Tao, N., Cao, Y., Snelling, W.M., Rohrer, G.A., Byatt, J.C. 2004. A comparison of the utility of SNPs discovered by different methods. Proc., 29th International Conference on Animal Genetics (ISAG). 9/11-16/2004. Toyko, Japan. Abstract A009. p. 43.
DETAILED MAPPING OF THE PORCINE CHROMOSOME X REGION HARBOURING QTL FOR FAT DEPOSITION - (Abstract Only)
Cepica, S., Bartenschlager, H., Masopust, M., Rohrer, G.A., Yerle, M., Geldermann, H. 2004. Detailed mapping of the porcine chromosome X region harbouring QTL for fat deposition. Proc., 29th Int. Conf. Anim. Genet. (ISAG) Toyko, Japan, 9/11-16/2004. Abstract F074. p. 143.
GENOME SCAN FOR LOCI AFFECTING PORK QUALITY IN A DUROC-LANDRACE F2 POPULATION - (Proceedings)
Rohrer, G.A., Thallman, R.M., Shackelford, S.D., Wheeler, T.L., Koohmaraie, M. 2004. Genome scan for loci affecting pork quality in a Duroc-Landrace F2 population. Proc., 29th Int. Conf. Anim. Genet. (ISAG) Toyko, Japan, 9/11-16/2004. Abstract F076. Pg 143.
COMPARATIVE MAPPING OF HUMAN CHROMOSOME 10 TO PIG CHROMOSOMES 10 AND 14 - (Peer Reviewed Journal)
Nonneman, D.J., Rohrer, G.A. 2004. Comparative mapping of human chromosome 10 to pig chromosomes 10 and 14. Animal Genetics 35:338-343.
VALIDATION OF QTLS IN A SWINE POPULATION SELECTED FOR OVULATION RATE - (Abstract Only)
Mousel, M.R., Rohrer, G.A., Leymaster, K.A., Christenson, R.K. 2004. Validation of QTLs in a swine population selected for ovulation rate. Journal of Animal Science 82(Supplement 1):452.
MAPPING AND GENETIC VARIATION WITHIN PORCINE 70 KILODALTON HEAT SHOCK PROTEIN 2 (HSPA2) - (Peer Reviewed Journal)
Grosz, M., Rohrer, G.A. 2004. Mapping and genetic variation within porcine 70 kilodalton heat shock protein 2 (HSPA2). Journal of Animal Science 82(Suppl. 1):380.
EVALUATION OF AN SNP IN STEROIDOGENIC ACUTE REGULATORY (STAR) PROTEIN FOR REPRODUCTIVE TRAITS IN SWINE - (Abstract Only)
Kim, J.G., Vallet, J.L., Christenson, R.K., Rohrer, G.A., Nonneman, D. 2004. Evaluation of an SNP in steroidogenic acute regulatory (STAR) protein for reproductive traits in swine [abstract]. Journal of Animal Science. 82(Supplement 1):65. (Abstract #M258)
ASSOCIATION OF A POLYMORPHISM IN THYROXINE BINDING GLOBULIN WITH BACKFAT DEPTH IN A COMPOSITE POPULATION CONTAINING 25% MEISHAN GERMPLASM - (Abstract Only)
Rohrer, G.A., Nonneman, D.J., Ford, J.J., Wise, T.H. 2004. Association of a polymorphism in thyroxine binding globulin with backfat depth in a composite population containing 25% meishan germplasm. Journal of Animal Science 82(Suppl. 2):42-43.
FUNCTIONAL VALIDATION OF A POLYMORPHISM FOR TESTSIS SIZE ON THE PORCINE X CHROMOSOME - (Abstract Only)
Nonneman, D.J., Rohrer, G.A., Ford, J.J., Wise, T.H., Lunstra, D.D. 2004. Functional validation of a polymorphism for testis size on the porcine X chromosome. Plant and Animal Genome Abstracts, W228, p. 62.
A 5.5 MB BAC/PAC CONTIG OF PIG CHROMOSOME 6Q1.2 AND ITS INTEGRATION WITH EXISTING RH, GENETIC AND COMPARATIVE MAPS - (Abstract Only)
Leeb, T., Martins-Wess, F., Brenig, B., Rohrer, G.A., Yerle, M., Milan, D. 2004. A 5.5 mb bac/pac contig of pig chromosome 6q1.2 and its integration with existing rh, genetic and comparative maps. Proc., Plant & Animal Genome XII, 1/10-14/04, San Diego, CA. W262, p. 70. 2004.
MODEL FOR EVALUATION OF TESTICULAR DEVELOPMENT IN BOARS - (Abstract Only)
Ford, J.J., Lunstra, D.D., Wise, T.H., Rohrer, G.A. 2004. Model for evaluation of testicular development in boars [abstract]. Journal of Animal Science. 82 (Supplement 2):89. (Abstract #247)
MAPPING OF THE FES AND FURIN GENES TO PORCINE CHROMOSOME 7 - (Peer Reviewed Journal)
Ernst, C., Raney, N., Rilington, V., Rohrer, G.A., Brouillette, J., Venta, P. 2004. Mapping of the FES and FURIN genes to porcine chromosome 7. Animal Genetics. 35:142-143.
AN OVERVIEW OF QTL RESEARCH FOR GROWTH AND BODY COMPOSITION IN A MEISHAN CROSS POPULATION AT THE U.S. MEAT ANIMAL RESEARCH CENTER - (Proceedings)
Rohrer, G. A. 2003. An overview of QTL research for growth and body composition in a Meishan cross population at the U.S. Meat Animal Research Center. In: Proceedings of the XXVIII Annual Meeting of the National Swine Improvement Federation,(NSIF), Des Moines, IA, p. 129-133.
SWINE GENOMICS AND ITS APPLICATION IN US PIG PRODUCTION - (Abstract Only)
Proc., Health, Disease, and Technological Development: U.S.-India Collaboration in Genomic Workshop. Bangalore, India, Sept. 5-12, 2003.
GENERATION OF A 5.5 MB BAC/PAC CONTIG OF PIG CHROMOSOME 6Q1.2 AND ITS INTEGRATION WITH EXISTING RH, GENERTIC AND COMPARATIVE MAPS. - (Peer Reviewed Journal)
Martins-Wess, F., Rohrer, G.A., Vob-Nemitz, R., Drogemuller, C., Brenig, B., Robic, A., Yerle, M., Milan, D., Leeb, T. 2003. Generation of a 5.5 mb bac/pac contig of pig chromosome 6q1.2 and its integration with existing rh, genertic and comparative maps.. Cytogenetics and Genome Research 102:116-120.
POSITIONAL CANDIDATE GENES FOR REPRODUCTIVE TRAITS IN A MEISHAN-WHITE COMPOSITE RESOURCE POPULATION ON PIG CHROMOSOME 10 - (Abstract Only)
Nonneman, D.J., Rohrer, G.A. 2003. Positional candidate genes for reproductive traits in a meishan-white composite resource population on pig chromosome 10. Journal of Animal Science 81(Suppl. 1):160.
LINKAGE AND RADIATION HYBRID MAPPING OF THE PORCINE PIK3R1 GENE TO CHROMOSOME 16 - (Peer Reviewed Journal)
CEPICA, S., ROHRER, G.A. LINKAGE AND RADIATION HYBRID MAPPING OF THE PORCINE PIK3R1 GENE TO CHROMOSOME 16. ANIMAL GENETICS. 2003. v. 34. p. 313.
BRIEF NOTE. LINKAGE MAPPING OF A SNP IN THE PORCINE MADH1 GENE TO A REGION OF CHROMOSOME 8 THAT CONTAINS QTL FOR UTERINE CAPACITY - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., ROHRER, G.A., VALLET, J.L., CHRISTENSON, R.K. BRIEF NOTE. LINKAGE MAPPING OF A SNP IN THE PORCINE MADH1 GENE TO A REGION OF CHROMOSOME 8 THAT CONTAINS QTL FOR UTERINE CAPACITY. ANIMAL GENETICS. 2003. v. 34(4). p. 310-311.
LINKAGE AND RADIATION HYBRID MAPPING OF THE PORCINE MYF6 GENE TO CHROMOSOME 5 - (Peer Reviewed Journal)
VYKOUKALOVA, Z., KNOLL, A., DVORAK, J., ROHRER, G.A., CEPICA, S. LINKAGE AND RADIATION HYBRID MAPPING OF THE PORCINE MYF6 GENE TO CHROMOSOME 5. ANIMAL GENETICS. 2003. v. 34. p. 238.
MOLECULAR CHARACTERIZATION AND ENDOMETRIAL EXPRESSION OF PORCINE SMAD1 - (Abstract Only)
KIM, J.G., VALLET, J.L., NONNEMAN, D.J., ROHRER, G.A., CHRISTENSON, R.K. MOLECULAR CHARACTERIZATION AND ENDOMETRIAL EXPRESSION OF PORCINE SMAD1. JOURNAL OF ANIMAL SCIENCE SUPPLEMENT. 2003. v. 81(Suppl. 1). p. 243. Abstract No. T27.
MOLECULAR CLONING OF THE PROCINE INHIBIN-BETA B PRECURSOR SUBUNIT GENE AND REASSIGNMENT TO CHROMOSOME 15 - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. MOLECULAR CLONING OF THE PROCINE INHIBIN-BETA B PRECURSOR SUBUNIT GENE AND REASSIGNMENT TO CHROMOSOME 15. ANIMAL GENETICS. 2003. v. 34. p. 213-215.
PRODUCTION OF A PORCINE-HUMAN COMPARATIVE MAP BASED ON THE PORCINE GENETIC MAP AND HUMAN GENOME SEQUENCE - (Proceedings)
Rohrer, G.A., Nonneman, D.J., Freking, B.A., Harhay, G.P., Snelling, W.M., Keele, J.W. 2002. Production of a porcine-human comparative map based on the porcine genetic map and human genome sequence. Plant and Animal Genome Conference Proceedings. Abstract P612.
DEVELOPMENT OF AN EST-DERIVED SNP-BASED LINKAGE MAP IN SWINE - (Proceedings)
Nonneman, D.J., Keele, J.W., Freking, B.A., Rohrer, G.A. Proceeding of the Plant & Animal Genome XI, 1/11-15/2003, San Diego, CA. p. 231.
REGULATION OF TESTICULAR SIZE IN PIGS: COMPARATIVE GENOMICS APPROACH - (Proceedings)
MCCOARD, S.A., WISE, T.H., FAHRENKRUG, S.C., ALEXANDER, L.J., FREKING, B.A., ROHRER, G.A., LUNSTRA, D.D., FORD, J.J. REGULATION OF TESTICULAR SIZE IN PIGS: COMPARATIVE GENOMICS APPROACH. PROCEEDINGS OF 8TH INTERNATIONAL PACIFIC RIM BIOTECHNOLOGY CONFERENCE. 2002. P. 56. AUCKLAND, NEW ZEALAND.
BRIEF NOTE. LINKAGE MAPPING OF A SINGLE NUCLEOTIDE POLYMORPHISM (SNP) IN THE PORCINE QDPR GENE TO CHROMOSOME 8 - (Peer Reviewed Journal)
KIM, J.G., NONNEMAN, D.J., VALLET, J.L., ROHRER, G.A., CHRISTENSON, R.K. BRIEF NOTE. LINKAGE MAPPING OF A SINGLE NUCLEOTIDE POLYMORPHISM (SNP) IN THE PORCINE QDPR GENE TO CHROMOSOME 8. ANIMAL GENETICS. 2002. v. 33(6). p. 474.
LINKAGE MAPPING OF PORCINE DGAT1 TO A REGION OF PORCINE CHROMOSOME 4 THAT CONTAINS QTL FOR GROWTH AND FATNESS - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. LINKAGE MAPPING OF PORCINE DGAT1 TO A REGION OF PORCINE CHROMOSOME 4 THAT CONTAINS QTL FOR GROWTH AND FATNESS. ANIMAL GENETICS. 2002. v. 33. p. 472-473.
MOLECULAR CHARACTERIZATION AND EXPRESSION OF PORCINE BONE MORPHOGENETIC PROTEIN RECEPTOR-IB IN THE UTERUS OF CYCLIC AND PREGNANT GILTS - (Peer Reviewed Journal)
KIM, J.G., SONG, J.H., VALLET, J.L., ROHRER, G.A., JOHNSON, G.A., JOYCE, M.M., CHRISTENSON, R.K. MOLECULAR CHARACTERIZATION AND EXPRESSION OF PORCINE BONE MORPHOGENETIC PROTEIN RECEPTOR-IB IN THE UTERUS OF CYCLIC AND PREGNANT GILTS. BIOLOGY OF REPRODUCTION. 2003. v. 68(3). p. 735-743.
RELATIONSHIPS OF TESTICULAR IRON AND FERRITIN CONCENTRATIONS WITH TESTICULAR WEIGHT AND SPERM PRODUCTION IN BOARS - (Peer Reviewed Journal)
WISE, T.H., LUNSTRA, D.D., ROHRER, G.A., FORD, J.J. 2003. RELATIONSHIPS OF TESTICULAR IRON AND FERRITIN CONCENTRATIONS WITH TESTICULAR WEIGHT AND SPERM PRODUCTION IN BOARS. JOURNAL OF ANIMAL SCIENCE. v. 81 (2). p. 503-511.
FINE MAPPING A QTL AFFECTING OVULATION RATE IN SWINE ON CHROMOSOME 8 - (Peer Reviewed Journal)
CAMPBELL, E.M.C., NONNEMAN, D.J., ROHRER, G.A. FINE MAPPING A QTL AFFECTING OVULATION RATE IN SWINE ON CHROMOSOME 8. JOURNAL OF ANIMAL SCIENCE. 2003. v.81. p. 1706-1714.
COMPARATIVE MAPPING OF A REGION ON CHROMOSOME 10 CONTAINING QTL FOR REPRODUCTION IN SWINE - (Peer Reviewed Journal)
NONNEMAN, D.J., ROHRER, G.A. COMPARATIVE MAPPING OF A REGION ON CHROMOSOME 10 CONTAINING QTL FOR REPRODUCTION IN SWINE. ANIMAL GENETICS. 2003. v. 34. p. 42-46.
PARTIAL CLONING, CYTOGENETIC AND LINKAGE MAPPING OF THE PORCINE RESISTIN (RSTN) GENE - (Peer Reviewed Journal)
CEPICA, S., ROHRER, G.A., MASOPUST, M., KUBICKOVA, A., MUSILOVA, P., RUBES, J. PARTIAL CLONING, CYTOGENETIC AND LINKAGE MAPPING OF THE PORCINE RESISTIN (RSTN) GENE. ANIMAL GENETICS. 2003. v. 33. p. 381-383.
CHARACTERIZATION OF PORCINE UTERINE ESTROGEN SULFOTRANSFERASE - (Peer Reviewed Journal)
KIM, J.G., VALLET, J.L., ROHRER, G.A., CHRISTENSON, R.K. CHARACTERIZATION OF PORCINE UTERINE ESTROGEN SULFOTRANSFERASE. DOMESTIC ANIMAL ENDOCRINOLOGY. 2002. v. 23(4). p. 493-506.
Characterization of the porcine melanocortin 2 receptor gene (MC2R) - (Peer Reviewed Journal)
Jacobs, K., Van Poucke, M., Mattheeuws, M., Chardon, P., Yerle, M., Rohrer, G.A., Van Zeveren, A., Peelman, L.J. 2002. Characterization of the porcine melanocortin 2 receptor gene (MC2R). Animal Genetics 33:415-421.
INTEGRATION OF GENETIC AND RADIATION HYBRID MAPS OF THE PIG: THE SECOND GENERATION IMPRH MAPS - (Proceedings)
Milan, D., Schiex, T., Yerle, M., Rink, A., Beattie, C., Alexander, L., Hawken, R., Schook, L., Hiroshi, Y., Pomp, D., Fredholm, M., Rohrer, G.A. 2002. Integration of genetic and radiation hybrid maps of the pig: the second generation IMpRH maps. 28th Animal Genetics International Conference Proceedings. Abstract D167. p. 140.
PORCINE GENE-DISCOVERY BY NORMALIZED CDNA-LIBRARY SEQUENCING AND EST CLUSTER ASSEMBLY - (Peer Reviewed Journal)
FAHRENKRUG, S.C., SMITH, T.P., FREKING, B.A., CHO, J., WHITE, J., VALLET, J.L., WISE, T.H., ROHRER, G.A., KEELE, J.W. PORCINE GENE-DISCOVERY BY NORMALIZED CDNA-LIBRARY SEQUENCING AND EST CLUSTER ASSEMBLY. MAMMALIAN GENOME. 2002. v. 13. p. 475-478.
ENDOMETRIAL EXPRESSION AND CHROMOSOMAL LOCATION OF THE PORCINE BONE MORPHOGENIC PROTEIN RECEPTOR-IB (BMPR-IB) GENE - (Abstract Only)
Kim, J.G., Song, J.H., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2002. Endometrial expression and chromosomal location of the porcine bone morphogenic protein receptor-IB (BMPR-IB) gene [abstract]. Biology of Reproduction. 66(Supplement 1):278. (Abstract No. 445)
CHARACTERIZATION AND CHROMOSOMAL ASSIGNMENT OF THE PORCINE AHCY GENE FOR S-ADENOSYLHOMOCYSTEINE HYDROLASE - (Peer Reviewed Journal)
Leeb, T., Rohrer, G.A. Characterization and chromosomal assignment of the porcine AHCY gene for S-adenosylhomocysteine hydrolase. 2002. Cytogenetics and Genome Research. 97:116-119.
GENE LINKAGE MAPPING OF THE PORCINE CHROMOSOME X REGION HARBOURING QTL FOR FAT DEPOSITION - (Abstract Only)
Cepica, S., Rohrer, G.A., Masopust, M. 2002. Gene linkage mapping of the porcine chromosome X region harbouring QTL for fat deposition. 28th Animal Genetics International Conference Proceedings. Abstract D014. p. 82.
USE OF RADIATION HYBRID MAPPING TO LOCATE CANDIDATE GENES FOR FEMALE REPRODUCTIVE TRAITS ON PORCINE CHROMOSOME 8 - (Proceedings)
King, A.H., Jiang, Z.H., Rohrer, G.A., Gibson, J.P., Waddington, D., Archibald, A.L. 2002. Use of radiation hybrid mapping to locate candidate genes for female reproductive traits on porcine chromosome 8. 28th Animal Genetics International Conference Proceedings. Abstract E063, p. 171.
CHARACTERIZATION OF THE PORCINE PEROXISOME PROLIFERATIVE ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 (PPARGC1) - (Proceedings)
Jacobs, K., Rohrer, G.A., Van Poucke, M., Piumi, F., Yerle, M., Mattheeuws, M., Van Zeveren, A., Peelman, L. 2002. Characterization of the porcine peroxisome proliferative activated receptor gamma coactivator 1 (PPARGC1) 28th Animal Genetics International Conference Proceedings. Abstract C025, p. 56-57.
GENETIC MAPPING PORCINE EST SEQUENCES USING LENGTH POLYMORPHISMS - (Proceedings)
Rohrer, G.A., Freking, B.A., Nonneman, D.J. 2002. Genetic mapping porcine EST sequences using length polymorphisms. 28th Animal Genetics International Conference Proceedings. Abstract D115. p. 121-122.
MAPPING MICROSATELLITE MARKERS IDENTIFIED IN PORCINE EST SEQUENCES - (Peer Reviewed Journal)
ROHRER, G.A., FAHRENKRUG, S.C., NONNEMAN, D.J., TAO, N., WARREN, W.C. MAPPING MICROSATELLITE MARKERS IDENTIFIED IN PORCINE EST SEQUENCES. ANIMAL GENETICS. 2002. v. 33. p. 372-376.
BRIEF NOTE. MAPPING OF THE PORCINE AREG AND EGF GENES TO SSC8 - (Peer Reviewed Journal)
KIM, J.G., VALLET, J.L., ROHRER, G.A., CHRISTENSON, R.K. BRIEF NOTE. MAPPING OF THE PORCINE AREG AND EGF GENES TO SSC8. ANIMAL GENETICS. 2002. v. 33(4). p. 314-315.
DIFFERENTIAL EXPRESSION OF CYCLOOXYGENASE-2 AROUND THE TIME OF ELONGATION IN THE PIG CONCEPTUS - (Peer Reviewed Journal)
Wilson, M.E., Fahrenkrug, S.C., Smith, T.P., Rohrer, G.A., Ford, S.P. 2001. Differential expression of cyclooxygenase-2 around the time of elongation in the pig conceptus. Animal Reproduction Sciences. 71:229-237.
SINGLE NUCLEOTIDE POLYMORPHISM (SNP) DISCOVERY IN PORCINE EXPRESSED GENES - (Peer Reviewed Journal)
Fahrenkrug, S.C., Freking, B.A., Smith, T.P., Rohrer, G.A., Keele, J.W. 2002. Single nucleotide polymorphism (SNP) discovery in porcine expressed genes. Animal Genetics. 33:186-195.
AN INTEGRATED COMPARATIVE MAP OF THE PORCINE X CHROMOSOME - (Peer Reviewed Journal)
Mccoard, S.A., Fahrenkrug, S.C., Alexander, L.J., Freking, B.A., Rohrer, G.A., Wise, T.H., Ford, J.J. 2002. An integrated comparative map of the porcine X chromosome. Animal Genetics. 33(3):178-185.
BRIEF NOTE. LINKAGE AND CYTOGENETIC MAPPING OF THE BCL9 GENE TO PORCINE CHROMOSOME 4 - (Peer Reviewed Journal)
Knoll, A., Dvorak, J., Rohrer, G.A., Cepica, S. 2002. Brief note. Linkage and cytogenetic mapping of the BCL9 gene to porcine chromosome 4. Animal Genetics. 33:162-163.
DETECTION OF ORIGIN BETWEEN TWO BLOODLINES OF ROMOSINUANO CATTLE USING MICROSATELLITE SCREENING - (Peer Reviewed Journal)
LINKAGE MAPPING OF A HAEIII PCR-RFLP WITHIN THE PORCINE EXT1 GENE - (Peer Reviewed Journal)
IDENTIFICATION OF PORCINE LHX3 AND SF1 AS CANDIDATE GENES FOR QTL AFFECTING GROWTH AND REPRODUCTION TRAITS IN SWINE - (Peer Reviewed Journal)
Smith, T.P., Showalter, A.D., Sloop, K.W., Rohrer, G.A., Fahrenkrug, S.C., Meier, B.C., Rhodes, S.J. 2001. Identification of porcine lhx3 and sf1 as candidate genes for qtl affectinggrowth and reproduction traits in swine. Animal Genetics. 32:344-350.
IDENTIFICATION OF GENOMIC REGIONS CONTROLLING PLASMA FSH CONCENTRATIONS IN MEISHAN-WHITE COMPOSITE BOARS - (Peer Reviewed Journal)
SHORT COMMUNICATION: AN UPDATED LINKAGE AND COMPARATIVE MAP OF PORCINE CHROMOSOME 18 - (Peer Reviewed Journal)
CAMPBELL, E.M., FAHRENKRUG, S.C., VALLET, J.L., SMITH, T.P., ROHRER, G.A. SHORT COMMUNICATION: AN UPDATED LINKAGE AND COMPARATIVE MAP OF PORCINE CHROMOSOME 18. ANIMAL GENETICS. 2001. v. 32. p. 375-379.
INTERRELATIONSHIPS OF PORCINE X AND Y CHROMOSOMES WITH PITUITARY GONADOTROPINS AND TESTICULAR SIZE - (Peer Reviewed Journal)
Ford, J.J., Wise, T.H., Lunstra, D.D., Rohrer, G.A. 2001. Interrelationships of porcine x and y chromosomes with pituitary gonadotropins and testicular size. Biology of Reproduction. v. 65(3). p. 906-912.
PRESENCE OF TWO FORMS OF PORCINE AMPHIREGULIN CDNA AND MAPPING OF THE GENE TO SSC8 NEAR A UTERINE CAPACITY QUANTITATIVE TRAIT TRAIT LOCUS - (Abstract Only)
Kim, J.G., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2001. Presence of two forms of porcine amphiregulin cDNA and mapping of the gene to SSC8 near a uterine capacity quantitative trait trait locus [abstract]. Proceedings Sixth International Conference on Pig Reproduction, Columbia, Missouri, p. 111. (Abstract No. 61)
INTERRELATIONSHIPS OF PORCINE X AND Y CHROMOSOMES WITH TESTICULAR SIZE - (Abstract Only)
Ford, J.J., Wise, T.H., Lunstra, D.D., Rohrer, G.A. 2001. Interrelationships of porcine X and Y chromosomes with testicular size [abstract]. Proceedings Sixth International Conference on Pig Reproduction, Columbia, Missouri, p. 44. (Abstract No. 14)
INTERRELATIONSHIPS OF PORCINE X AND Y CHROMOSOMES WITH PLASMA GONADOTROPIN CONCENTRATIONS - (Abstract Only)
Ford, J.J., Wise, T.H., Lunstra, D.D., Rohrer, G.A. 2001. Interrelationships of porcine X and Y chromosomes with plasma gonadotropin concentrations [abstract]. Biology of Reproduction. 64 (Supplement 1):252. (Abstract #371)
COMPARATIVE MAPPING OF THE PORCINE X CHROMOSOME - (Abstract Only)
McCoard, S.A., Fahrenkrug, S.C., Freking, B.A., Rohrer, G.A., Wise, T.H., Ford, J.J. 2001. Comparative mapping of the porcine x chromosome [abstract]. Journal of Animal Science. 79 (Supplement 2):36. (Abstract #23)
CHARACTERIZATION OF UTERINE PORCINE AMPHIREGULIN - (Abstract Only)
Kim, J.G., Vallet, J.L., Rohrer, G.A., Christenson, R.K. 2001. Characterization of uterine porcine amphiregulin [abstract]. Journal of Animal Science. 79(Supplement 2):90. (Abstract No. 261)
INTERVAL MAPPING OF CARCASS AND MEAT QUALITY TRAITS IN A DIVERGENT SWINE CROSS - (Peer Reviewed Journal)
MAPPING MICROSATELLITE MARKERS IDENTIFIED IN PORCINE EST SEQUENCES - (Abstract Only)
MAPPING EXPRESSED SEQUENCE TAGS (ESTS) IN PIGS USING SINGLE NUCLEOTIDE POLYMORPHISMS (SNPS) - (Abstract Only)
LINKAGE MAPPING OF FOUR GENES (OTC, TBG, SLC25A5 AND FMR1) ON PORCINE CHROMOSOME X - (Peer Reviewed Journal)
CONSTRUCTION OF SNP-BASED EST COMPARATIVE MAP OF SWINE, CATTLE, AND HUMAN GENOMES - (Abstract Only)
RAPID COMMUNICATION: LINKAGE MAPPING OF THE PORCINE MICROMOLAR CALCIUM ACTIVATED NEUTRAL PROTEASE 1 (UCALPAIN) GENE ON SSC2 - (Peer Reviewed Journal)
RAPID COMMUNICATION. GENETIC LINKAGE AND PHYSICAL MAPPING OF A PORCINE SEQUENCE CHARACTERIZED AMPLIFIED REGION (SCAR) TO CHROMOSOME 6 - (Peer Reviewed Journal)
FIVE NEW PORCINE MICROSATELLITES FROM A MICROSATELLITE ENRICHED MICRODISSECTED CHROMOSOME 13 LIBRARY - (Peer Reviewed Journal)
RAPID COMMUNICATION: TWENTY-SIX NEW PORCINE MICROSATELLITES FROM A MICROSATELLITE ENRICHED MICRODISSECTED CHROMOSOME 8 LIBRARY - (Peer Reviewed Journal)
DETECTION OF ORIGIN BETWEEN TWO BLOODLINES OF ROMOSINUANO CATTLE USING MICROSATELLITE SCREENING - (Abstract Only)
IDENTIFICATION OF QUANTITATIVE TRAIT LOCI AFFECTING BIRTH CHARACTERS AND ACCUMULATION OF FAT AND WEIGHT IN A MEISHAN-WHITE COMPOSITE RESOURCE POPULATION - (Peer Reviewed Journal)
LINKAGE MAPPING OF ESTS IN PIGS USING SINGLE NUCLEOTIDE POLYMORPHISMS (SNPS): II. HIGH-THROUGHPUT GENOTYPING AND MAPPING - (Abstract Only)
LINKAGE MAPPING ESTS IN PIGS USING SINGLE NUCLEOTIDE POLYMORPHISMS (SNPS): SNP DISCOVERY - (Abstract Only)
A POLYMORPHISM IN THE PUTATIVE START CODON OF ALPHA MANNOSIDASE 2B2 DOES NOT APPEAR TO AFFECT OVULATION RATE IN SWINE - (Abstract Only)
ISOLATION OF 31 NEW PORCINE MICROSATELLITES FROM A MICROSATELLITE ENRICHED MICRODISSECTED CHROMOSOME 8 LIBRARY - (Peer Reviewed Journal)
A PRELIMINARY GENOMIC SCAN FOR CHROMOSOMAL REGIONS AFFECTING PLASMA FSH CONCENTRATIONS IN PUBERTAL BOARS - (Abstract Only)
IDENTIFICATION AND CHARACTERIZATION OF A NEW ALLELE FOR THE BETA SUBUNIT OF FOLLICLE-STIMULATING HORMONE IN CHINESE PIG BREEDS - (Peer Reviewed Journal)
PHYSICAL ASSIGNMENT OF THE PORCINE ERYTHROPOIETIN RECEPTOR GENE TO SSC2 (SHORT COMMUNICATION) - (Peer Reviewed Journal)
EVIDENCE OF QTL AFFECTING REPRODUCTION IN PIGS - (Abstract Only)
INSIGHT INTO THE BIOLOGY BEHIND QTL AFFECTING FAT DEPOSITION IN SWINE - (Abstract Only)
LINKAGE MAPPING OF TWO TAQ1 PCR-RFLPS WITHIN INTRON 6 OF THE PORCINE GENE (LCN1) ENCODING TEAR LIPOCALIN/VON EBNER'S GLAND PROTEIN - (Peer Reviewed Journal)
FACTORS AFFECTING FETAL HEMATOCRIT (HC) AND FETAL PLASMA IRON (PI) AT 105 DAYS OF GESTATION IN SWINE - (Abstract Only)
Vallet, J.L., Rohrer, G.A., Klemcke, H.G., Christenson, R.K. 1999. Factors affecting fetal hematocrit (HC) and fetal plasma iron (PI) at 105 days of gestation in swine [abstract]. Journal of Animal Science. 77(Supplement 1):219.
DEVELOPMENTAL TRANSCRIPTION OF ANDROGEN RECEPTOR IN HYPOTHALAMUS-PITUITARY-TESTICULAR AXIS OF BOARS - (Abstract Only)
Song, J.H., Rohrer, G.A., Wise, T.H., Ford, J.J. 1999. Developmental transcription of androgen receptor in hypothalamus-pituitary-testicular axis of boars [abstract]. Biology of Reproduction. 60 (Supplement 1):234. (Abstract #454)
PHASE 2 IN THE IDENTIFICATION OF A GENE AFFECTING OVULATION RATE IN SWINE: GENTOYPING ADDITIONAL ANIMALS WITH ADDITIONAL MARKERS - (Abstract Only)
EVIDENCE FOR QTL ON CHROMOSOMES 1, 8 AND 13 AFFECTING REPRODUCTION IN PIGS - (Abstract Only)
INDICATION OF QUANTITATIVE TRAIT LOCI ON CHROMOSOME 6 AFFECTING PORCINE REPRODUCTIVE TRAITS - (Abstract Only)
ANDROGEN RECEPTOR: A CANDIDATE GENE FOR A POSSIBLE QTL ON THE X CHROMOSOME FOR TESTICULAR SIZE AND BLOOD FSH LEVELS IN BOARS - (Abstract Only)
CYTOGENETIC ASSIGNMENT OF 53 MICROSATELLITES FROM THE USDA-MARC PORCINE GENETIC MAP - (Peer Reviewed Journal)
IDENTIFICATION OF QUANTITATIVE TRAIT LOCI AFFECTING FEMALE REPRODUCTIVE TRAITS IN A MULTI-GENERATION, MEISHAN-WHITE COMPOSITE SWINE POPULATION - (Peer Reviewed Journal)
RAPID COMMUNICATION. ANDROGEN RECEPTOR (AR) MAPS TO XP1.1-Q1.1 IN THE PORCINE GENOME - (Abstract Only)
RAPID COMMUNICATION. PHOSPHOGLYCERATE KINASE 1 (PGK1) MAPS TO XQ1.2 IN THE PORCINE GENOME - (Abstract Only)
IDENTIFICATION OF FOUR HIGHLY POLYMORPHIC PORCINE MICROSATELLITE LOCI - (Abstract Only)
RAPID COMMUNICATION: GENETIC LINKAGE AND PHYSICAL MAPPING OF THE PORCINE ANDROGEN RECEPTOR (AR) GENE - (Peer Reviewed Journal)
MAPPING FOUR GENES FROM HUMAN CHROMOSOME 4 TO PORCINE CHROMOSOME 8 FURTHER DEVELOPS THE COMPARATIVE MAP FOR AN ECONOMICALLY IMPORTANT CHROMOSOME OF THE SWINE GENOME - (Peer Reviewed Journal)
INTERVAL MAPPING OF GROWTH IN DIVERGENT SWINE CROSS - (Peer Reviewed Journal)
MAPPING GENES OF ECONOMIC IMPORTANCE IN SWINE - (Proceedings)
MAPPING BOVINE AND OVINE GENES WITH INTRONIC SINGLE NUCLEOTIDE POLYMORPHISMS - (Abstract Only)
MAPPING QTL AFFECTING OVULATION RATE IN A MULTI-GENERATION, MEISHAN- WHITE COMPOSITE POPULATION - (Abstract Only)
IDENTIFICATION OF QTL AFFECTING CARCASS COMPOSITION IN SWINE: FAT DEPOSITION TRAITS - (Peer Reviewed Journal)
IDENTIFICATION OF QTL AFFECTING CARCASS COMPOSITION IN SWINE: MUSCLING AND WHOLESALE PRODUCT YIELD TRAITS - (Peer Reviewed Journal)
LIVESTOCK VARIATION OF LINKED MICROSATELLITE MARKERS IN DIVERSE SWINE BREEDS - (Peer Reviewed Journal)
GENETICS OF THE PIG - (Book / Chapter)
RAPID COMMUNICATION: IDENTIFICATION OF TWO MICROSATELLITE LOCI WHICH MAP TO PORCINE CHROMOSOME 3. - (Abstract Only)
RAPID COMMUNICATION: IDENTIFICATION OF TWO MICROSATELLITE LOCI WHICH MAP TO PORCINE CHROMOSOME 6. - (Abstract Only)
MAPPING QTL FOR CARCASS COMPOSITION IN SWINE - (Abstract Only)
DETERMINATION OF COVERAGE AND REGIONAL RATES OF RECOMBINATION FOR THE PORCINE LINKAGE MAP BY FLUORESCENT IN SITU HYBRIDIZATION OF GENETIC MARKERS - (Abstract Only)
GENOMIC MAPPING OF CHEMOKINE AND TRANSFORMING GROWTH FACTOR GENES IN SWINE (SHORT COMMUNICATION) - (Abstract Only)
THE U.S. MARC GENOME PROGRAM: MAP DEVELOPMENT AND LINKAGE ASSOCIATIONS BETWEEN DNA MARKERS AND TRAITS IN FARM ANIMALS - (Proceedings)
MYOSTATIN MAPS TO PORCINE CHROMOSOME 15 BY LINKAGE AND PHYSICAL ASSIGNMENT TO SSC15Q2.3 (SHORT COMMUNICATION) - (Abstract Only)
MAPPING GENES LOCATED ON HSA 2 AND 12 TO PORCINE CHROMOSOMES 15 AND 5 - (Abstract Only)
INTEGRATION OF PIG PHYSICAL AND LINKAGE MAPS: ANCHORING THE TELOMERIC AND CENTROMERIC REGIONS FOR SSC1, 4, 8 AND 10 BY FISH - (Proceedings)
MODIFICATION OF THE PRIMER-LINKER METHOD FOR MICRODISSECTION LIBRARY CONSTRUCTION - (Proceedings)
MAPPING 28 ERYTHROCYTE ANTIGEN, PLASMA PROTEIN AND ENZYME POLYMORPHISMS USING AN EFFICIENT GENOMIC SCAN OF THE PORCINE GENOME. - (Peer Reviewed Journal)
MOLECULAR IDENTIFICATION AND CHARACTERIZATION OF A NOVEL FSH-BETA ALLELE IN CHINESE PIG BREEDS - (Abstract Only)
GENETIC INFLUENCES ON SUSCEPTIBILITY TO ACQUIRED DISEASES - (Book / Chapter)
LINKAGE ASSIGNMENT OF ELEVEN GENES TO THE PORCINE GENOME - (Peer Reviewed Journal)
MAPPING GENES TO SWINE X CHROMOSOME PROVIDES REFERENCE LOCI FOR COMPARATIVE MAPPING - (Abstract Only)
A CONSENSUS LINKAGE MAP FOR SWINE CHROMOSOME 7 - (Peer Reviewed Journal)
EVIDENCE FOR QUANTITATIVE TRAIT LOCI AFFECTING OVULATION RATE IN PIGS - (Peer Reviewed Journal)
ESTIMATES OF GENETIC CORRELATIONS BETWEEN SERUM FSH CONCENTRATIONS IN MALESAND MEASURES OF FEMALE REPRODUCTION IN A CROSSBRED MEISHAN POPULATION OF PIGS - (Abstract Only)
NEBULIN (NEB) MAPS TO PORCINE CHROMOSOME (SSC) 15 - (Abstract Only)
INCREASING MARKER DENSITY IN THE REGION OF TWO LIKELY PORCINE QUANTITATIVE TRAIT LOCI FOR BIRTH WEIGHT AND NUMBER OF CORPORA LUTEA FURTHER DEFINES THE INTERVALS - (Proceedings)
MAPPING OF HPRT GENE IN SWINE PROVIDES A REFERENCE LOCUS FOR SYNTENY COMPARISON - (Proceedings)
SEARCHING FOR REPRODUCTION QTL IN PIGS AND "PICO-PIGS" - (Proceedings)
DEVELOPMENT OF HIGH-RESOLUTION MAPS OF SWINE CHROMOSOMAL SEQMENTS CONTAINING QTL - (Abstract Only)
A GENOMIC SCAN TO ASSIGN 14 BLOOD GROUPS AND 12 PROTEIN POLYMORPHISMS IN SWINE - (Abstract Only)
NONOVERLAPPING SUBGENOMIC LIBRARIES FROM PORCINE CHROMOSOMES - (Abstract Only)
SCAN OF 8 PORCINE CHROMOSOMES FOR GROWTH, CARCASS AND REPRODUCTIVE TRAITS REVEALS TWO LIKELY QUANTITATIVE TRAIT LOCI - (Abstract Only)
QUANTITATIVE TRAIT LOCI AFFECTING REPRODUCTIVE TRAITS IN SWINE - (Abstract Only)
MAPPING OF FOUR CHEMOKINE GENES IN THE SWINE GENOME - (Abstract Only)
LINKAGE ASSIGNMENTS FOR HAS 19 CONSERVED REGIONS OF SYNTENY IN CATTLE, SHEEP AND SWINE - (Proceedings)
MAPPING THE SWINE GENOME: CURRENT STATUS AND FUTURE DIRECTIONS - (Abstract Only)
CONSTRUCTION OF A PORCINE YEAST ARTIFICIAL CHROMOSOME (YAC) LIBRARY - (Abstract Only)
A COMPREHENSIVE MAP OF THE PORCINE GENOME - (Peer Reviewed Journal)
GENOMIC SCAN FOR QUANTITATIVE TRAIT LOCI IN SWINE BASED ON MICROSATELLITE MARKERS - (Abstract Only)
PHYSICAL ASSIGNMENTS OF 68 PORCINE COSMID AND LAMBDA CLONES CONTAINING POLYMORPHIC MICROSATELLITES - (Peer Reviewed Journal)
CLONING AND CHARACTERIZATION OF 414 POLYMORPHIC PORCINE MICROSATELLITES - (Peer Reviewed Journal)
SHORT COMMUNICATION--AN UNASSIGNED PORCINE MICROSATELLITE LINKAGE GROUP MAPS TO CHROMOSOME 6 - (Abstract Only)
DIRECTED INTEGRATION OF THE PHYSICAL AND GENETIC LINKAGE MAPS OF SWINE CHROMOSOME 7 REVEALS THAT THE SLA SPANS THE CENTROMERE - (Peer Reviewed Journal)
THE CHROMOSOME 7 LINKAGE GROUP DEVELOPED AT THE U.S. MEAT ANIMAL RESEARCH CENTER - (Proceedings)
USE OF DISC-PCR TO CREATE FRAMEWORK MARKERS - (Proceedings)
FIRST INTERNATIONAL WORKSHOP ON PORCINE CHROMOSOME 6 - (Peer Reviewed Journal)
SHORT COMMUNICATION--PORCINE SINE ASSOCIATED MICROSATELLITE MARKERS: EVIDENCE FOR NEW ARTIODACTYL SINES - (Abstract Only)
INTEGRATION OF THE PORCINE LINKAGE AND PHYSICAL MAPS BY FISH AND DISC-PCR (POST-APPROVAL----PROC. 33RD ANNUAL AMERICAN CYTOGENETICS CONFERENCE, SAN DIEGO, CA) - (Abstract Only)
USE OF DIRECT IN SITU SINGLE COPY PCR TO DEVELOP COMPREHENSIVE GENETIC MAPS - (Abstract Only)
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