Research Project: Development of High-Yielding, High-Oleic Peanut Cultivars or Germplasm with Tolerance to Biotic and Abiotic Stresses

Location: Crop Genetics and Breeding Research

Publications (Clicking on the reprint icon will take you to the publication reprint.)

The roles of net photosynthesis rate and transpiration efficiency on economic yield of Jerusalem artichoke (Helianthus tuberosus L.) genotypes under different drought durations during the terminal growth stages - (Peer Reviewed Journal)
Chaimala, A., Jogloy, S., Vorasoot, N., Holbrook Jr, C.C., Kvien, C.K. 2023. The roles of net photosynthesis rate and transpiration efficiency on economic yield of Jerusalem artichoke (Helianthus tuberosus L.) genotypes under different drought durations during the terminal growth stages. Agronomy. 13(7). Article 1882. https://doi.org/10.3390/agronomy13071882.

High-throughput canopy and below ground phenotyping of a set of peanut CSSLs detects lines with increased pod weight and foliar disease tolerance - (Peer Reviewed Journal)
Gimode, D., Chu, Y., Holbrook Jr, C.C., Fonceka, D., Porter, W., Dobreva, I., Teare, B., Ruiz-Guman, H., Hays, D., Ozias-Akins, P. 2023. High-throughput canopy and below ground phenotyping of a set of peanut CSSLs detects lines with increased pod weight and foliar disease tolerance. Agronomy. 13(5). Article 1223. https://doi.org/10.3390/agronomy13051223.

Development of peanut cultivars with resistance to leaf spot and their evaluation under different production systems - (Abstract Only)

Registration of 'TifNV-HG' Peanut - (Peer Reviewed Journal)
Holbrook Jr, C.C., Ozias-Akins, P., Chu, Y., Brenneman, T.B., Culbreath, A.K. 2023. Registration of 'TifNV-HG' Peanut. Journal of Plant Registrations. 2023;1-5. https://doi.org/10.1002/plr2.20295.

Registration of 'TifJumbo' peanut - (Peer Reviewed Journal)
Holbrook Jr, C.C., Clevenger, J., Ozias-Akins, P., Chu, Y., Brenneman, T.B. 2024. Registration of 'TifJumbo' peanut. Journal of Plant Registrations. 18:279-284. https://doi.org/10.1002/plr2.20285.

Light interception and radiation use efficiency of three cassava genotypes with different plant types and seasonal variations - (Peer Reviewed Journal)
Mahakosee, S., Jogloy, S., Vorasoot, N., Theerakulpisut, P., Toomsan, B., Holbrook Jr, C.C., Kvien, C.K., Banterng, P. 2022. Light interception and radiation use efficiency of three cassava genotypes with different plant types and seasonal variations. Agronomy. 12(11). Article 2888. https://doi.org/10.3390/agronomy12112888.

Development of a greenhouse method to the evaluate peanut resistance to Athelia rolfsii - (Peer Reviewed Journal)
Tsai, Y., Brenneman, T.B., Holbrook Jr, C.C., Chu, Y., Ozias-Akins, P., Bertioli, D.J., Leal-Bertioli, S. 2023. Development of a greenhouse method to the evaluate peanut resistance to Athelia rolfsii. PhytoFrontiers. 1-27. https://doi.org/10.1094/PHYTOFR-06-22-0069-TA.

The responses for inulin content and inulin yield of Jerusalem artichoke (Helianthus tuberosus L.) genotypes and the associations of net photosynthethic rate withi inulin traits to different terminal drought durations - (Peer Reviewed Journal)
Chaimala, A., Jogloy, S., Vorasoot, N., Holbrook Jr, C.C., Kvien, C.K. 2022. The responses for inulin content and inulin yield of Jerusalem artichoke (Helianthus tuberosus L.) genotypes and the associations of net photosynthethic rate withi inulin traits to different terminal drought durations in the late-rainy season. South African Journal of Botany. 151:277-287. https://doi.org/10.1016/j.sajb.2022.09.047.

Diversity of ultraviolet reflection pattern in Arachis flowers - (Peer Reviewed Journal)
Levinson, C.M., Chu, Y., Leal-Bertioli, S., Stalker, H.T., Holbrook Jr, C.C., Gao, D., Ozias-Akins, P. 2022. Diversity of ultraviolet reflection pattern in Arachis flowers. Peanut Science. 49:12-25. https://doi.org/10.3146/0095-3679-492-PS22-1.

Light interception and radiation use efficiency of cassava under irrigated and rainfed conditions and seasonal variations - (Peer Reviewed Journal)
Mahakosee, S., Jogloy, S., Vorasoot, N., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Banterng, P. 2022. Light interception and radiation use efficiency of cassava under irrigated and rainfed conditions and seasonal variations. Agriculture. 12(5):725. https://doi.org/10.3390/agriculture12050725.

Genomic designing for biotic stress resistant peanut - (Book / Chapter)
Bera, S.K., Rani, K., Kamdar, J.H., Pandey, M.K., Desmae, H., Holbrook Jr, C.C., Burow, M.D., Manivannan, N., Bhat, R.S., Jasani, M.D., Bera, S.S., Badigannavar, A.M., Sunkad, G., Wright, G.C., Janila, P., Varshney, R.K. 2022. Genomic designing for biotic stress resistant peanut. In: C. Kole (ed.) Genomic Designing for Biotic Stress Resistant Oil Seed Crops. Springer Nature Switzerland.. pp. 137-214. https://doi.org/10.1007/978-3-030-91035-8_9.

Registration of two peanut recombinant inbred lines (TifGP-5 and TifGP-6) resistant to late leaf spot disease - (Peer Reviewed Journal)
Chu, Y., Clevenger, J.P., Holbrook Jr, C.C., Isleib, T.G., Ozias-Akins, P. 2022. Registration of two peanut recombinant inbred lines (TifGP-5 and TifGP-6) resistant to late leaf spot disease. Journal of Plant Registrations. https://doi.org/10.1002/plr2.20242.

Profitability of growing peanut cultivars with resistance to leaf spot under different production systems - (Abstract Only)

Genetics of Fusarium head blight resistance in soft red winter wheat using a genome-wide association study - (Peer Reviewed Journal)
Ghimire, B., Mergoum, M., Martinez-Espinoza, A.D., Sapkota, S., Pradhan, S., Babar, M.A., Bai, G., Dong, Y., Buck, J.W. 2022. Genetics of Fusarium head blight resistance in soft red winter wheat using a genome-wide association study. The Plant Genome. e20222. https://doi.org/10.1002/tpg2.20222.

Quantitative evaluation of macro-nutrient uptake by Cassava in a tropical savanna climate - (Peer Reviewed Journal)
Janket, A., Vorasoot, N., Toomsan, B., Kaewpradit, W., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Jogloy, S., Banterng, P. 2021. Quantitative evaluation of macro-nutrient uptake by Cassava in a tropical savanna climate. Agriculture. 11(12):1199. https://doi.org/10.3390/agriculture11121199.

Development and genetic characterization of peanut advanced backcross lines that incorporate root-knot nematode resistance from Arachis stenosperma - (Peer Reviewed Journal)
Ballen-Taborda, C., Chu, Y., Ozias-Akins, P., Holbrook Jr, C.C., Timper, P., Jackson, S.A., Bertioli, D.J., Leal-Bertioli, S. 2022. Development and genetic characterization of peanut advanced backcross lines that incorporate root-knot nematode resistance from Arachis stenosperma. Frontiers in Plant Science. 12:785358. https://doi.org/https://doi.org/10.3389/fpls.2021.785358.

The variation of relative water content, SPAD chlorophyll meter reading, stomatal conductance, leaf area, and specific leaf area of Jerusalem artichoke genotypes under different durations of terminal drought in tropic region - (Peer Reviewed Journal)
Chaimala, A., Jogloy, S., Vorasoot, N., Holbrook Jr, C.C., Kvien, C.K. 2021. The variation of relative water content, SPAD chlorophyll meter reading, stomatal conductance, leaf area, and specific leaf area of Jerusalem artichoke genotypes under different durations of terminal drought in tropical region. Journal of Agronomy and Crop Science. 00:1-15. https://www.doi.org/10.1111/jac.12561.

Registration of TifGP-3 and TifGP-4 peanut germplasm lines - (Peer Reviewed Journal)
Holbrook Jr, C.C., Ozias-Akins, P., Chu, Y., Lamon, S., Bertioli, D.J., Leal-Bertioli, S., Culbreath, A.K., Godoy, I.J. 2021. Registration of TifGP-3 and TifGP-4 peanut germplasm lines. Journal of Plant Registrations. 16:120-123. https://doi.org/10.1002/plr2.20179.

Phenotypic variation of component traits affecting maturity in cultivated peanut (Arachis hypogaea L.) - (Peer Reviewed Journal)
Chu, Y., Monfero Marasigan, K., Arrais Guimaraes, L., Holbrook Jr, C.C., Ozias-Akins, P. 2022. Phenotypic variation of component traits affecting maturity in cultivated peanut (Arachis hypogaea L.). Peanut Science. 49:1-11. https://doi.org/10.3146/0095-3679-492-PS21-18.

Anatomical characteristics correlated to peg strength in Arachis - (Peer Reviewed Journal)
Levinson, C.M., Chu, Y., Levinson, M., Marasigan, K., Stalker, H.T., Holbrook Jr, C.C., Ozias-Akins, P. 2021. Anatomical characteristics correlated to peg strength in Arachis. Peanut Science. 48:97-112. https://doi.org/10.3146/PS21-1.1.

Morphological and reproductive characterization of nascent allotetraploids cross-compatible with cultivated peanut (Arachis hypogaea L.) - (Peer Reviewed Journal)
Levinson, C.M., Chu, Y., Luo, X., Stalker, H.T., Gao, D., Holbrook Jr, C.C., Ozias-Akins, P. 2021. Morphological and reproductive characterization of nascent allotetraploids cross-compatible with cultivated peanut (Arachis hypogaea L.). Genetic Resources and Crop Evolution. 68:2883–2896. https://doi.org/10.1007/s10722-021-01161-0.

Registration of three peanut allotetraploid interspecific hybrids resistant to late leaf spot disease and tomato spotted wilt - (Peer Reviewed Journal)
Chu, Y., Stalker, H.T., Marasigan, K., Levinson, C.M., Gao, D., Bertioli, D.J., Leal-Bertioli, S., Holbrook Jr, C.C., Jackson, S.A., Ozias-Akins, P. 2021. Registration of three peanut allotetraploid interspecific hybrids resistant to late leaf spot disease and tomato spotted wilt. Journal of Plant Registrations. 15:562–572. https://doi.org/10.1002/plr2.20146.

Homoeologous recombination is recurrent in the nascent synthetic allotetraploid Arachis ipaensis x Arachis correntina and its derivatives - (Peer Reviewed Journal)
Chu, Y., Bertioli, D., Levinson, C., Stalker, H.T., Holbrook Jr, C.C., Ozias-Akins, P. 2021. Homoeologous recombination is recurrent in the nascent synthetic allotetraploid Arachis ipaensis x Arachis correntina and its derivatives. G3, Genes/Genomes/Genetics. 11(4):1-13. https://doi.org/10.1093/g3journal/jkab066.

Nutrient uptake and nutrient use efficiency of cassava genotypes with different starch bulking periods as affected by different planting dates - (Peer Reviewed Journal)
Janket, A., Jogloy, S., Vorasoot, N., Toomsan, B., Kaewpradit, W., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Banterng, P. 2021. Nutrient uptake and nutrient use efficiency of cassava genotypes with different starch bulking periods as affected by different planting dates. Journal of Plant Nutrition. 44:580-599. https://doi.org/10.1080/01904167.2020.1845381.

Registration of GA-BatSten1 and GA-MagSten1, two induced allotetraploids derived from peanut wild relatives with superior resistance to leaf spots, rust and root-knot nematode - (Peer Reviewed Journal)
Bertioli, D.J., Gao, D., Ballen-Taborda, C., Chu, Y., Ozias-Akins, P., Jackson, S.A., Holbrook Jr, C.C., Leal-Bertioli, S. 2021. Registration of GA-BatSten1 and GA-MagSten1, two induced allotetraploids derived from peanut wild relatives with superior resistance to leaf spots, rust and root-knot nematode. Journal of Plant Registrations. 15:372-378. https://doi.org/10.1002/plr2.20133.

Resistance to fall armyworm (Lepidoptera: Noctuidae) feeding was identified in nascent allotetraploids cross-compatible to cultivated peanut (Arachis hypogaea) - (Peer Reviewed Journal)
Levinson, C.M., Marasigan, K.M., Chu, Y., Stalker, T.H., Holbrook Jr, C.C., Ni, X., Williams, W.P., Ozias-Akins, P. 2020. Resistance to fall armyworm (Lepidoptera: Noctuidae) feeding was identified in nascent allotetraploids cross-compatible to cultivated peanut (Arachis hypogaea). Peanut Science. 47:123-134. https://doi.org/10.3146/PS20-13.1.

Seasonal variation in canopy size, light penetration and photosynthesis of three cassava genotypes with different canopy architectures - (Peer Reviewed Journal)
Mahakosee, S., Jogloy, S., Vorasoot, N., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Banterng, P. 2020. Seasonal variation in canopy size, light penetration and photosynthesis of three cassava genotypes with different canopy architectures. Agronomy. 10, 1554. https://doi.org/10.3390/agronomy10101554.

Accumulation dynamics of starch and it's granule size distribution of Cassava genotypes at different growing seasons - (Peer Reviewed Journal)
Janket, A., Vorasoot, N., Toomsan, B., Kaewpradit, W., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Jogloy, S., Banterng, P. 2020. Accumulation dynamics of starch and it's granule size distribution of Cassava genotypes at different growing seasons. Agriculture. 10,380:1-16. https://doi.org/10.3390/agriculture10090380.

Characterization of peanut lines with interspecific introgressions conferring late leaf spot resistance - (Peer Reviewed Journal)
Lamon, S., Chu, Y., Guimaraes, L.A., Bertioli, D., Leal-Bertioli, S., Culbreath, A.K., Holbrook Jr, C.C., Ozias-Akins, P. 2021. Characterization of peanut lines with interspecific introgressions conferring late leaf spot resistance. Crop Science. 61:1724–1738. https://www.doi.org/10.1002/csc2.20414.

Responses of total biomass, shoot dry weight, yield and yield components of Jerusalem artichoke (Helianthus tuberosus L.) varieties under different terminal drought duration - (Peer Reviewed Journal)
Chaimala, A., Jogloy, S., Vorasoot, N., Toomsan, B., Jongrungklang, N., Kesmala, T., Holbrook Jr, C.C., Kvien, C. 2020. Responses of total biomass, shoot dry weight, yield and yield components of Jerusalem artichoke (Helianthus tuberosus L.) varieties under different terminal drought duration. Agriculture. 10(6), 198. https://doi.org/10.3390/agriculture10060198.

Pod and seed trait QTL identification to assist breeding for peanut market preferences - (Peer Reviewed Journal)
Chavarro, C., Chu, Y., Holbrook Jr, C.C., Isleib, T.G., Bertioli, D., Hovav, R., Butts, C.L., Lamb, M.C., Sorensen, R.B., Jackson, S.A., Ozias-Akins, P. 2020. Pod and seed trait QTL identification to assist breeding for peanut market preferences. Genes, Genomes, and Genomics. 10:2297-2315. https://doi.org/10.1534/g3.120.401147.

Starch accumulation and granule size distribution of Cassava cv. Rayong 9 grown under irrigated and rainfed conditions using different growing seasons - (Peer Reviewed Journal)
Janket, A., Vorasoot, N., Toomsan, B., Kaewpradit, W., Jogloy, S., Theerakulpisut, P., Holbrook Jr, C.C., Kvien, C.K., Bantering, P. 2020. Starch accumulation and granule size distribution of Cassava cv. Rayong 9 grown under irrigated and rainfed conditions using different growing seasons. Agronomy. 10, 4012. https://doi.org/10.3390/agronomy10030412.

Mapping quantitative trait loci (QTLs) and estimating the epistasis controlling stem rot resistance in cultivated peanut (Arachis hypogaea) - (Peer Reviewed Journal)
Luo, Z., Cui, R., Chavarro, C., Tseng, Y., Zhou, H., Peng, Z., Chu, Y., Yang, X., Lopez, Y., Tillman, B., Dufault, N., Brenneman, T., Isleib, T.G., Holbrook Jr, C.C., Ozias-Akins, P., Wang, J. 2020. Mapping quantitative trait loci (QTLs) and estimating the epistasis controlling stem rot resistance in cultivated peanut (Arachis hypogaea). Journal of Theoretical and Applied Genetics. 133:1201-1212.

Quantitative trait loci sequencing-derived molecular markers for selection of stem rot resistance in peanut - (Peer Reviewed Journal)
Cui, R., Clevenger, J., Chu, Y., Brenneman, T., Isleib, T.G., Holbrook Jr, C.C., Ozias-Akins, P. 2020. Quantitative trait loci sequencing-derived molecular markers for selection of stem rot resistance in peanut. Crop Science. 60:2008-2018. https://doi.org/10.1002/csc2.20047.

Major seed size QTL on chromosomes A05 of peanut (Arachis hypogaea) is conserved in the U.S. minicore germplasm collection - (Peer Reviewed Journal)
Chu, Y., Chee, P., Isleib, T.G., Holbrook Jr, C.C., Ozias-Akins, P. 2019. Major seed size QTL on chromosomes A05 of peanut (Arachis hypogaea) is conserved in the U.S. minicore germplasm collection. Molecular Breeding. 40(6):1-16. https://doi.org/10.1007/s11032-019-1082-4.

Detection of mycotoxins and toxigenic fungi in cereal grains using vibrational spectroscopic techniques: A review - (Peer Reviewed Journal)
Jia, B., Wang, W., Ni, X., Chu, X., Yoon, S.C., Lawrence, K.C. 2020. Detection of mycotoxins and toxigenic fungi in cereal grains using vibrational spectroscopic techniques: A review. World Mycotoxin Journal. 13(2):163-178. https://doi.org/10.3920/WMJ2019.2510.

Seasonal variation in canopy size and yield of Rayong 9 cassava genotype under rainfed and irrigated conditions - (Peer Reviewed Journal)
Mahakosee, S., Jogloy, S., Vorasoot, N., Theerakulpisut, P., Banterng, P., Kesmala, T., Holbrook Jr, C.C., Kvien, C. 2019. Seasonal variation in canopy size and yield of Rayong 9 cassava genotype under rainfed and irrigated conditions. Agronomy. 9:362.

Peanut yield gains over the past fifty years - (Peer Reviewed Journal)
Holbrook Jr, C.C. 2019. Peanut yield gains over the past fifty years. Peanut Science. 46:73-77.

Major QTLs for resistance to early and late leaf spot diseases are identified on chromosomes 3 and 5 in peanut (Arachis hypogaea) - (Peer Reviewed Journal)
Chu, Y., Chee, P., Culbreath, A.K., Isleib, T.B., Holbrook Jr, C.C., Ozias-Akins, P. 2019. Major QTLs for resistance to early and late leaf spot diseases are identified on chromosomes 3 and 5 in peanut (Arachis hypogaea). Frontiers in Plant Science. 10:1-13.

Association of aflatoxin contamination and root traits of peanut genotypes under terminal drought - (Peer Reviewed Journal)
Koolachart, R., Jogloy, S., Vorasoot, N., Wongkaew, S., Holbrook Jr, C.C., Jongrungklang, N., Kesmala, T., Suriharn, B. 2019. Association of aflatoxin contamination and root traits of peanut genotypes under terminal drought. SABRAO J. of Breeding and Genetics. 51(3):234-251.

Effect of terminal drought on arginine content in peanut genotypes with difference in levels of drought resistance - (Peer Reviewed Journal)
Aninbon, C., Jogloy, S., Vorasoot, N., Nuchadomrong, S., Holbrook Jr, C.C., Kvien, C., Patanothai, A. 2019. Effect of terminal drought on arginine content in peanut genotypes with difference in levels of drought resistance. International Journal of Plant Production. 13:155-162.

Determination of lethal dose and effect of gamma rays on growth and tuber yield of Jerusalem artichoke mutant - (Peer Reviewed Journal)
Songsri, P., Jogloy, S., Holbrook Jr, C.C., Puangbut, D. 2019. Determination of lethal dose and effect of gamma rays on growth and tuber yield of Jerusalem artichoke mutant. SABRAO J. of Breeding and Genetics. 51:1-11.

Influence of temperature on susceptibility of cvs. Tifguard and Georgia-06G peanut to Meloidogyne arenaria - (Peer Reviewed Journal)
Yuan, W., Holbrook Jr, C.C., Chu, Y., Ozias-Akins, P., Dickson, D.W. 2018. Influence of temperature on susceptibility of cvs. Tifguard and Georgia-06G peanut to Meloidogyne arenaria. Journal of Nematology. 50:33-40.

Insight into genes regulating postharvest aflatoxin contamination of tetraploid peanut from transcriptional profiling - (Peer Reviewed Journal)
Korani, W., Chu, Y., Holbrook Jr, C.C., Ozias-Akins, P. 2018. Insight into genes regulating postharvest aflatoxin contamination of tetraploid peanut from transcriptional profiling. Genetics. 209:143-156.

Mapping late leaf spot resistance in peanut (Arachis hypogaea) using QTL-seq reveals markers for marker-assisted selection - (Peer Reviewed Journal)
Clevenger, J., Chu, Y., Chavarro, C., Botton, S., Culbreath, A.K., Isleib, T.G., Holbrook Jr, C.C., Ozias-Akins, P. 2018. Mapping late leaf spot resistance in peanut (Arachis hypogaea) using QTL-seq reveals markers for marker-assisted selection. Frontiers in Plant Science. 9:83. https://doi.org/10.3389/fpls.2018.00083.

Phenotyping and genotyping parents of sixteen recombinant inbred peanut populations - (Peer Reviewed Journal)
Chu, Y., Holbrook Jr, C.C., Isleib, T.G., Burow, M., Culbreath, A.K., Tillman, B., Chen, J., Clevenger, J., Ozias-Akins, P. 2018. Phenotyping and genotyping parents of sixteen recombinant inbred peanut populations. Peanut Science. 45:1-11.

Expression of the limited-transpiration trait under high vapour pressure deficit in peanut populations: Runner and virginia types - (Peer Reviewed Journal)
Shekoofa, A., Sinclair, T.R., Aninbon, C., Holbrook Jr, C.C., Isleib, T.G., Ozias-Akins, P., Chu, Y. 2017. Expression of the limited-transpiration trait under high vapour pressure deficit in peanut populations: Runner and virginia types. Journal of Agronomy and Crop Science. 203(4):295-300.