Research Agronomist
Education
B.S.; Agronomy; 1968; Mississippi State University
M.S.; Agronomy; 1971; Mississippi State University
Ph.D.; Agronomy; 1974; Mississippi State University; Research Emphasis: Agronomy, plant breeding, & entomology
Biography & Research Interests
Dr. McCarty’s research area is Agronomy/Breeding with emphasis in expanding cotton’s genetic diversity, conversion of photoperiodic primitive races of cotton to day-neutrality, germplasm enhancement for improved fiber quality, and breeding for root-knot and reniform nematode resistance. During his research career he has had enough success to remain motivated and enough failure to remain well grounded.
Outside Interests
Dr. McCarty’s other interest include visiting the family farm, enjoying the wonders of nature, family history, photography, and traveling.
Projects
Enhancing Agronomic Traits, Fiber Quality, and Resistance to Environmental Stress, Nematodes, and Fungal Diseases in Cotton In-House Appropriated (D) Accession Number:444591
News
Publications
will take you to the publication reprint.)
-(Peer Reviewed Journal)
Wubben, M., Mccarty Jr, J.C., Hayes, R.W., Callahan, F.E., Deng, D.D., Jenkins, J.N. 2024. Registration of upland cotton RILs MS-4857 and MS-4878 with resistance to root-knot nematode and reniform nematode. Journal of Plant Registrations. 2024;1-5. https://doi.org/10.1002/plr2.20379.
-(Peer Reviewed Journal)
Sreedasyam, A., Lovell, J., Mamidi, S., Khanal, S., Jenkins, J., Plott, C., Kempton, B., Li, Z., Shu, S., Carlson, J., Goodstein, D., Santiago, L., Kirkbride, R., Calleja, S., Campbell, B.T., Koebernick, J., Dever, J., Scheffler, J.A., Pauli, D., Jenkins, J.N., Mccarty Jr, J.C., Williams, M., Boston, L., Webber, J., Udall, J.A., Chen, Z., Bourland, F., Stiller, W., Saaki, C., Grimwold, J., Chee, P., Jones, D., Schmutz, J. 2024. Genome resources for three modern cotton lines guide future breeding efforts. Nature Plants. https://doi.org/10.1038/s41477-024-01713-z.
-(Peer Reviewed Journal)
Hinchliffe, D.J., Naoumkina, M., Thyssen, G.N., Nam, S., Chang, S., Mccarty, J.C., Jenkins, J.N. 2024. Multi-Omics Analysis of Pigmentation Related to Proanthocyanidin Biosynthesis in Brown Cotton (Gossypium hirsutum L.). Frontiers in Plant Science. 15: 1372232. https://doi.org/10.3389/fpls.2024.1372232.
-(Peer Reviewed Journal)
Wu, J., Jenkins, J.N., Mccarty Jr, J.C. 2023. An adaptive sequential replacement method to variable selection in linear regression analysis. Open Journal of Statistics. 13:746-760. https://doi.org/10.4236/ojs.2023.135036.
-(Peer Reviewed Journal)
Dowd, M.K., Shockey, J., Mccarty Jr, J.C., Jenkins, J.N. 2023. Breeding of high seed oil oleate levels into Upland cotton from wild Gossypium barbadense L. germplasm. Crop Science. 63(6):3393-3401. https://doi.org/10.1002/csc2.21119.
-(Peer Reviewed Journal)
Hron, R.J., Hinchliffe, D.J., Thyssen, G.N., Condon, B.D., Zeng, L., Santiago Cintron, M., Jenkins, J.N., Mccarty Jr, J.C., Sui, R. 2023. Interrelationships between cotton fiber quality traits and fluid handling and moisture management properties of nonwoven textiles. Textile Research Journal. https://doi.org/10.1177/00405175221132011.
-(Peer Reviewed Journal)
Hinchliffe, D.J., Thyssen, G.N., Condon, B.D., Zeng, L., Hron, R.J., Madison, C.A., Jenkins, J.N., Mccarty Jr, J.C., Delhom, C.D., Sui, R. 2023. Interrelationships between cotton fiber quality traits and tensile properties of hydroentangled nonwoven fabrics. Journal of Industrial Textiles. https://doi.org/10.1177/15280837231171312.
Conner, A., Allen, T.W., Jimenez Madrid, A.M., Tripathi, S., Tadlock, N., Wilkerson, T., Stetina, S.R., Chastain, D.R., McCarty Jr, J.C. 2023. Evaluation of reniform nematode resistant commercially available cotton cultivars compared with USDA developed cotton breeding lines. National Cotton Council Beltwide Cotton Conference. 1:325-327.
-(Peer Reviewed Journal)
Saha, S., Tewolde, H., Jenkins, J.N., Mccarty Jr, J.C., Stelly, D.M. 2023. Chromosome substitution lines with improved essential mineral nutrients and fiber quality traits in Upland cotton. Genetic Resources and Crop Evolution. https://doi.org/10.1007/s10722-023-01628-2.
-(Peer Reviewed Journal)
Thyssen, G.N., Condon, B.D., Hinchliffe, D.J., Zeng, L., Naoumkina, M., Jenkins, J.N., Mccarty,J.C., Sui, R., Madison, C., Li, P., Fang, D.D. Flame resistant cotton lines generated by synergistic epistasis in a MAGIC population. PLOS ONE. 18:e0278696.2023. https://doi.org/10.1371/journal.pone.0278696.
-(Peer Reviewed Journal)
Fang, D.D., Thyssen, G.N., Wang, M.C., Jenkins, J.N., Mccarty Jr, J.C., Jones, D.C. 2022. Genomic confirmation of Gossypium barbadense introgression into G. hirsutum and a subsequent MAGIC population. Molecular Genetics and Genomics. 298:143-152. https://doi.org/10.1007/s00438-022-01974-3.
-(Peer Reviewed Journal)
Gaudin, A.G., Wubben, M., Mccarty Jr, J.C., Jenkins, J.N. 2023. Virulence of two isolates of Meloidogyne enterolobii (guava root-knot nematode) from North Carolina on cotton lines resistant to southern root-knot nematode (M. incognita) and reniform nematode (Rotylenchulus reniformis). Journal of Nematology. 55:0021. https://doi.org/10.2478/jofnem-2023-0021.
-(Peer Reviewed Journal)
Zhu, Y., Thyssen, G.N., Abdelraheem, A., Teng, Z., Fang, D.D., Jenkins, J.N., Mccarty Jr, J.C., Wedegaertner, T., Hake, K., Zhang, J. 2022. A GWAS identified a major QTL for resistance to Fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) race 4 in a MAGIC population of Upland cotton and a meta-analysis of QTLs for Fusarium wilt resistance. Theoretical and Applied Genetics. 135:2297-2312. https://doi.org/10.1007/s00122-022-04113-z.
-(Peer Reviewed Journal)
Wang, M., Qi, Z., Thyssen, G.N., Naoumkina, M.A., Jenkins, J.N., McCarty, J.C., Xiao, Y., Li, J., Zhang, X., Fang, D.D. 2022. Genomic interrogation of a MAGIC population highlights genetic factors controlling fiber quality traits in cotton. Communications Biology. 5:60. https://doi.org/10.1038/s42003-022-03022-7.
-(Peer Reviewed Journal)
Jenkins, J.N., Mccarty Jr, J.C., Hayes, R.W., Wubben, M., Fang, D.D., Thyssen, G.N., Zeng, L., Campbell, B.T., Jones, D.C. 2021. Registration of seven recombinant inbred lines of Upland cotton with improved fiber length or strength. Journal of Plant Registrations. 16:94-99. https://doi.org/10.1002/plr2.20193.
-(Peer Reviewed Journal)
Bellaloui, N., Saha, S., Tonos, J.L., Scheffler, J.A., Jenkins, J.N., McCarty Jr, J.C., Stelly, D.M. 2021. Effects of interspecific chromosome substitution in upland cotton on cottonseed macronutrients. Plants. 10(6):1-13. https://doi.org/10.3390/plants10061158.
Mccarty Jr, J.C., Jenkins, J.N., Saha, S., Wubben, M. 2021. History of USDA-ARS Cotton Host Resistance and Breeding Research at Mississippi State, MS. Journal of Cotton Science. 25:101-157. https://www.cotton.org/journal/2021-25/2/.
Bellaloui, N., Saha, S., Tonos, J.L., Scheffler, J.A., Jenkins, J.N., McCarty Jr, J.C., Stelly, D.M. 2021. Effect of chromosome substitution from alien tetraploid cotton species in Upland cotton on (+) and (-) gossypol enantiomer levels in cottonseed. Journal of Cotton Science. 25:7-20.
-(Peer Reviewed Journal)
Abdelraheem, A., Thyssen, G.N., Fang, D.D., Jenkins, J.N., McCarty, J.C., Wedegaertner, T., Zhang, J. 2020. GWAS reveals consistent QTL for drought and salt tolerance in a MAGIC population of 550 lines derived from intermating of 11 Upland cotton (Gossypium hirsutum) parents. Molecular Genetics and Genomics. 296(1):119-129. https://doi.org/10.1007/s00438-020-01733-2.
-(Peer Reviewed Journal)
Bellaloui, N., Saha, S., Tonos, J.L., Scheffler, J.A., Jenkins, J.N., McCarty Jr, J.C., Stelly, D.M. 2020. Effects of interspecific chromosome substitution in upland cotton on cottonseed micronutrients. Plants. 9(9):1-17. https://doi.org/10.3390/plants9091081.
-(Peer Reviewed Journal)
Zhang, J., Abdelraheem, A., Zhu, Y., Wheeler, T.A., Dever, J., Frelichowski, J.E., Love, J., Ulloa, M., Jenkins, J.N., McCarty Jr, J.C., Nichols, R., Wedegaertner, T. 2020. Assessing genetic variation for Fusarium wilt race 4 resistance in tetraploid cotton by screening over three thousand germplasm lines under greenhouse or controlled conditions. Euphytica. 216:108. https://doi.org/10.1007/s10681-020-02646-2.
-(Peer Reviewed Journal)
Saha, S., Bellaloui, N., Jenkins, J.N., Mccarty Jr, J.C., Stelly, D.M. 2020. Effect of chromosome substitution from Gossypium barbadense L,G. tomentosum Nutt. Ex Seem and G. mustelinum Watt into G. hirsutum L. on cottonsend protein and oil content. Euphytica. 216:118. https://doi.org/10.1007/s10681-020-02644-4.
-(Peer Reviewed Journal)
Kim, H.J., Delhom, C.D., Fang, D.D., Zeng, L., Jenkins, J.N., Mccarty Jr, J.C., Jones, D.C. 2020. Application of the cottonscope for determining fiber maturity and fineness of an upland cotton MAGIC population. Crop Science. 60(5):2266–2279. https://doi.org/10.1002/csc2.20197.
-(Peer Reviewed Journal)
He, Z., Zhang, H., Fang, D.D., Zeng, L., Jenkins, J.N., McCarty, J.C. 2020. Effects of inter-species chromosome substitution on cottonseed mineral and protein nutrition profiles. Agronomy Journal. 112:3963-3974. https://doi.org/10.1002/agj2.20264.
-(Peer Reviewed Journal)
Wubben, M., Gaudin, A.G., Mccarty Jr, J.C., Jenkins, J.N. 2020. Differential effects of cotton root-knot nematode resistance QTL on RKN development and fecundity. Phytopathology. 110:927-932. https://doi.org/10.1094/PHYTO-09-19-0370-R.
-(Peer Reviewed Journal)
Zhang, J., Abdelraheem, A., Thyssen, G.N., Fang, D.D., Jenkins, J.N., McCarty Jr, J.C., Wedegaertner, T. 2019. Evaluation and genome-wide association study of Verticillium wilt resistance in a MAGIC population derived from intermating of eleven Upland cotton (Gossypium hirsutum) parents. Euphytica. 216:9. https://doi.org/10.1007/s10681-019-2547-6.
-(Peer Reviewed Journal)
Dowd, M.K., McCarty Jr, J.C., Shockey, J., Jenkins, J.N. 2020. Registration of four upland cotton germplasm lines with elevated levels of seed oil oleic acid. Journal of Plant Registrations. 14(1):64-71. https://doi.org/10.1002/plr2.20017.
-(Peer Reviewed Journal)
Islam, M.S., Fang, D.D., Jenkins, J.N., Guo, J., Mccarty Jr, J.C., Jones, D.C. 2019. Evaluation of genomic selection methods for predicting fiber quality traits in upland cotton. Molecular Genetics and Genomics. 295:67-69. https://doi.org/10.1007/s00438-019-01599-z.
-(Peer Reviewed Journal)
Wu, J., Jenkins, J.N., McCarty Jr, J.C. 2019. Revealing GE interactions from trial data without replications. Open Journal of Statistics. 9:407-419. https://doi.org/10.4236/ojs.2019.93027.
-(Peer Reviewed Journal)
Wubben, M., Thyssen, G.N., Callahan, F.E., Fang, D.D., Deng, D.D., Mccarty Jr, J.C., Li, P., Islam, M.S., Jenkins, J.N. 2019. A novel variant of Gh_D02G0276 is required for Root-Knot nematode resistance on chromosome 14 in Upland Cotton. Theoretical and Applied Genetics. 2019)132:1425–1434. https://doi.org/10.1007/s00122-019-03289-1.
-(Peer Reviewed Journal)
Naoumkina, M.A., Thyssen, G.N., Fang, D.D., Jenkins, J.N., McCarty, J.C., Florane, C.B. 2019. Genetic and transcriptomic dissection of the fiber length trait from a cotton (Gossypium hirsutum L.) MAGIC population. BMC Genomics. 20:112. https://doi.org/10.1186/s12864-019-5427-5.
-(Peer Reviewed Journal)
Thyssen, G.N., Jenkins, J.N., McCarty, J.C., Zeng, L., Campbell, B.T., Delhom, C.D., Islam, M.S., Li, P., Jones, D.C., Condon, B.D., Fang, D.D. 2018. Whole genome sequencing of a MAGIC population identified genomic loci and candidate genes for major fiber quality traits in upland cotton (Gossypium hirsutum L.). Journal of Theoretical and Applied Genetics. 132:989-999. https://doi.org/10.1007/s00122-018-3254-8.
-(Peer Reviewed Journal)
Martinez, G.K., Abdelraheem, A., Darapuneni, M., Jenkins, J.N., McCarty Jr, J.C., Zhang, J. 2019. Evaluation of a multi-parent advanced generation inter-cross (MAGIC) introgressed line population for Verticillium wilt resistance in Upland cotton. Euphytica. 214:197. https://doi/10.1007/s10681-018-2278-0.
-(Peer Reviewed Journal)
McCarty Jr, J.C., Deng, D.D., Jenkins, J.N., Geng, L. 2018. Genetic diversity of day-neutral converted landrace, Gossypium hirsutum L., accessions. Euphytica. 214:173. https://doi.org/10.1007/s10681-018-2264-6.
-(Peer Reviewed Journal)
Thyssen, G.N., Naoumkina, M.A., McCarty, J.C., Jenkins, J.N., Florane, C.B., Li, P., Fang, D.D. 2018. The P450 gene CYP749A16 is required for tolerance to the sulfonylurea herbicide trifloxysulfuron sodium in cotton (Gossypium hirsutum L.). Biomed Central (BMC) Plant Biology. 18:186. https://doi.org/10.1186/s12870-018-1414-2.
-(Peer Reviewed Journal)
Read, J.J., Adeli, A., McCarty Jr, J.C., Feng, G.G. 2018. Cotton response to residual poultry litter: leaf area, nitrogen removal, and yield. Agronomy Journal. 110(6):2360-2368. https://doi.org/10.2134/agronj2018.05.0348.
-(Peer Reviewed Journal)
Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Geng, L., Hayes, R.W., Jones, D.C., Mammadova, R. 2018. Introgression of Gossypium barbadense L. into Upland cotton germplasm RMBUP-C4S1. Euphytica. 214:118. https://doi.org/10.1007/s10681-018-2200-9.
-(Book / Chapter)
Ayubov, M.S., Abdurakhmonov, I.Y., Sripathi, V.R., Saha, S., Norov, T.M., Buriev, Z.T., Shermatov, S.E., Ubaydullaeva, K.A., Mccarty Jr, J.C., Deng, D.D., Jenkins, J.N. 2017. Recent developments in fiber genomics of tetraploid cotton species. Cotton. 6:123-152. 10.5772/intechopen.72922.
-(Peer Reviewed Journal)
Jenkins, J.N., Mccarty Jr, J.C., Campbell, B.T., Hayes, R.W., Wu, J., Saha, S., Stelly, D.M. 2017. Genotypic comparisons of chromosomes 01, 04 and 18 from three tetraploid species of gossypium in topcrosses with five elite cultivars of G. hirsutum L. Euphytica. 213:107.
-(Peer Reviewed Journal)
McCarty Jr, J.C., Jenkins, J.N., Hayes, R.W., Wubben, M. 2017. Effects of plant density on boll retention and yield of cotton. American Journal of Plant Sciences. 8:891-906.
Saha, S., Wu, J., Jenkins, J.N., Mccarty Jr, J.C., Campbell, B.T., Hayes, R.W., Stelly, D.M. 2017. Tri-species shuffling of chromosomes to study the effects on fiber traits using chromosome substitution lines. Crop Science. 57(3):1211-1226.
Wubben, M., McCarty Jr, J.C., Jenkins, J.N., Callahan, F.E., Deng, D.D. 2017. Individual and combined contributions of the Renbarb1, Renbarb2, and Renbarb3 quantitative trait loci to reniform nematode (Rotylenchulus reniformis Linford & Oliveira) resistance in Upland Cotton (Gossypium hirsutum L.). Euphytica. 213:1-9.
-(Peer Reviewed Journal)
Jenkins, J.N., McCarty Jr, J.C., Campbell, B.T., Hayes, R.W., Wu, J., Saha, S., Stelly, D. 2017. Genetic effects of chromosomes 01, 04, and 18 from three tetraploid gossypium species in topcrosses with five elite cultivars. Crop Science. 57:1338-1346.
-(Peer Reviewed Journal)
Saha, S., Jenkins, J.N., McCarty Jr, J.C., Hayes, R.W., Stelly, D.M., Campbell, B.T. 2017. Four chromosome-specific (Gossypium barbadense chromosome 5sh) Upland cotton RILs with improved elongation. Journal of Plant Registrations. 11(2):165-167.
-(Germplasm Registration)
Mccarty Jr, J.C., Jenkins, J.N., Wubben, M., Hayes, R.W., Callahan, F.E., Deng, D.D. 2017. Registration of six germplasm lines of cotton, Gosspyium hirsutum L. with resistance to root-knot and reniform nematodes. Journal of Plant Registrations. 11:168-171.
-(Peer Reviewed Journal)
Islam, M.S., Thyssen, G.N., Jenkins, J.N., Zeng, L., Delhom, C.D., McCarty, J.C., Deng, D.D., Hinchliffe, D.J., Jones, D.C., Fang, D.D. 2016. A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton. BMC Genomics. 17:903. https://doi.org/10.1186/s12864-016-3249-2.
Hinchliffe, D.J., Condon, B.D., Thyssen, G.N., Naoumkina, M.A., Madison, C.A., Reynolds, M.L., Delhom, C.D., Fang, D.D., Li, P., McCarty Jr, J.C. 2016. The GhTT2_A07 gene is linked to the brown colour and natural flame retardancy phenotypes of Lc1 cotton (Gossypium hirsutum L.) fibres. Journal of Experimental Botany. 67(18):5461-5471.
-(Peer Reviewed Journal)
Adeli, A., Mccarty Jr, J.C., Read, J.J., Willers, J.L., Jenkins, J.N., Feng, G.G. 2016. Subsurface banding, placement of pelletized poultry litter in cotton. Agronomy Journal. 108(4):1356-1366.
Nam, S., Kim, H.J., Condon, B.D., Hinchliffe, D.J., Chang, S., Mccarty, J.C., Madison, C.A. 2016. High resistance to thermal decomposition in brown cotton is linked to tannis and sodium content. Cellulose. 23(2):1137-1152.
Bondalapati, K.D., Jenkins, J.N., Mccarty Jr, J.C., Wu, J. 2015. Field experimental design comparisons to detect field effects associated with agronomic traits in Upland cotton. Euphytica. 206:747-757.
-(Peer Reviewed Journal)
Adeli, A., Read, J.J., McCarty Jr., J.C., Jenkins, J.N., Feng, G.G. 2015. Soybean yield and nutrient utilization following long-term pelletized broiler litter application to cotton. Agronomy Journal. 107:1128-1134.
Adeli, A., Jenkins, J.N., Mccarty Jr, J.C., Read, J.J., Tewolde, H. 2014. Precision litter application practices for cotton production and soil properties. American Society of Agronomy Abstracts. November 2-5, 2014, Longbeach, CA.
Fang, D.D., Jenkins, J.N., Deng, D.D., McCarty Jr, J.C., Li, P., Wu, J. 2014. Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.). Biomed Central (BMC) Genomics. 15:397.
-(Peer Reviewed Journal)
McCarty Jr., J.C., Jenkins, J.N., Gutierrez, O.A., Hayes, R.W. 2014. Registration of RMPAP-C4, a random-mated primitive race accession cotton germplasm population. Journal of Plant Registrations. 8:313-317.
Zhang, J., Percy, R.G., McCarty Jr, J.C. 2014. Introgression genetics and breeding between Upland and Pima cotton: A review. Euphytica. 198:1-12.
Nichols, R.L., Bell, A.A., Creech, R.C., Chee, P.W., Davis, R.F., Erpelding, J.E., Fang, D.D., Gutierrez, O.A., Hake, K.D., Jenkins, J.N., Jones, J., Lawrence, K.L., Mccarty Jr, J.C., Overstreet, C., Roberts, P.A., Robinson, A.F., Sikkens, R.B., Starr, J.L., Stelly, D.M., Stetina, S.R., Stipanovic, R.D., Thaxton, P., Ulloa, M., Wallace, T., Wang, C., Weaver, D.B., Wubben, M., Zhang, J. 2014. Accomplishments of a 10-year initiative to develop host plant resistance to root-knot and reniform nematodes in cotton. Proceedings of the Beltwide Cotton Conferences. CDROM.
Nichols, R.L., Bell, A.A., Creech, R.G., Chee, P., Davis, R.F., Erpelding, J.E., Fang, D.D., Gutierrez, O.A., Hake, K.D., Jenkins, J.N., Jones, J.E., Lawrence, K.S., Mccarty Jr, J.C., Overstreet, C., Roberts, P.A., Robinson, A.F., Sikkens, R.B., Starr, J.L., Stelly, D.M., Stetina, S.R., Stipanovic, R.D., Smith-Thaxton, P., Ulloa, M., Wallace, T.P., Wang, C., Weaver, D.B., Wubben, M., Zhang, J. 2014. Accomplishments of a 10-year initiative to develop host plant resistance to root-knot and reniform nematodes in cotton [abstract]. Beltwide Cotton Conferences, January 6-8, 2014, New Orleans, LA. p. 662.
Thyssen, G.N., McCarty, J.C., Li, P., Jenkins, J.N., Fang, D.D. 2014. Genetic mapping of non-target-site resistance to a sulfonylurea herbicide (Envoke®) in Upland cotton (Gossypium hirsutum L.). Molecular Breeding. 33:341-348.
Aziz, A., Jenkins, J.N., McCarty Jr, J.C., Stelly, D.M., Saha, S. 2013. Pollen genotyping in cotton for genetic linkage analysis. Proceedings Research: Celebrating Excellence, April 1-5, 2013, Nashville, TN. CD ROM.
Xu, Y., Jenkins, J.N., McCarty Jr, J.C., Wu, J. 2013. Variation analysis for fiber quality traits among different positions in eight Upland cotton cultivars. In: W. Song, editors. Proceedings Twenty-fourth Annual Kansas State University Conference on Applied Statistics in Agriculture, April 29-May 1, 2012, Manhattan, Kansas. p. 309-320.
Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Hayes, R.W., Jones, D.C. 2013. Registration of RMBUP-C4, a random mated population with Gossypium hirsutum L. alleles, introgresssed into Upland cotton germplasm. Journal of Plant Registrations. 7:224-228.
Wu, J., Bondalapati, K., Glover, K., Berzonsky, W., Jenkins, J.N., McCarty, J.C. 2013. Genetic analysis without replications: model evaluation and application in spring wheat. Euphytica. 190:447-458.
McCarty Jr., J.C., Jenkins, J.N., Wubben, M., Gutierrez, O.A., Hayes, R.W., Callahan, F.E., Deng, D.D. 2013. Registration of three germplasm lines of cotton derived from Gossypium barbadense L. accession GB713 with resistance to the reniform nematode. Journal of Plant Registrations. 7:220-223.
Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2013. Interspecific chromosomal effects on agronomic traits in Gossypium hirsutum by AD analysis using intermated G. barbadense chromosome substitution lines. Theoretical and Applied Genetics. 126:109-117.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Glover, K. 2012. Detecting epistatic effects associated with cotton traits by a modified MDR approach. Euphytica. 187:289-301.
Saha, S., Emgamberdiev, S.S., Wu, J., Jenkins, J.N., McCarty Jr, J.C., Deng, D.D., Abdurakhmonov, I. 2012. Association of SSR markers with important fiber traits in Upland cotton [abstract]. National Cotton Council Beltwide Cotton Conference. p. 754.
Jenkins, J.N., McCarty Jr, J.C., Wu, J., Hayes, R.W., Stelly, D. 2012. Genetic effects of nine Gossypium barbadense L. chromosome substitution lines in top crosses with five elite Upland cotton G. hirsutum L. cultivars. Euphytica. 187:161-173.
Adeli, A., Jenkins, J.N., McCarty Jr., J.C., Tewolde, H., Read, J.J. 2012. Evaluation of precision litter application practices for cotton production and soil properties. National Cotton Council Beltwide Cotton Conference, January 3-6, 2012, Orlando, FL. CD-ROM.
Saha, S., Stelly, D.M., Raska, D., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Abdusalom, M., Gotmare, V., Abdurakhmonov, I.Y., Campbell, B.T. 2011. Interspecific chromosome substitution lines from Gossypium barbadense and G. tomentosum in Upland cotton improvement. Proceedings World Cotton Research Conference-5. p. 129.
McCarty, Jr., J.C., Jenkins, J.N., Wubben, M., Hayes, R.W., Lafoe, M. 2012. Registration of three germplasm lines of cotton derived from Gossypium hirsutum L. accession T2468 with moderate resistance to the reniform nematode. Journal of Plant Registrations. 6:85-87.
Saha, S., Stelly, D.M., Raska, D.A., Wu, J., Jenkins, J.N., McCarty, Jr., J.C., Makamov, A., Gotmare, V., Abudurakhmonov, I., Campbell, B.T. 2012. Chromosome substitution lines: Concept, development and utilization in the genetic improvement of upland cotton. In: Abdurakhmoov, I.Y., editor. Plant Breeding. InTech. p. 107-128.
Jenkins, J.N., McCarty Jr., J.C., Wubben, M.J., Hayes, R.W., Gutierrez, O.A., Callahan, F.E., Deng, D.D. 2012. SSR markers for marker assisted selection of root-knot nematode (Meloidogyne incognita) resistant plants in cotton (Gossypium hirsutum L.). Euphytica. 183:49-54.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Lou, X. 2011. Comparisons of four approximation algorithms for large-scale linkage map construction. Theoretical and Applied Genetics. 123:649-655.
Aziz, A.N., Kommireddy, V.L., Jenkins, J.N., McCarty Jr, J.C., Stelly, D.M., Saha, S. 2011. Enrichment of chromosome 17 specific molecular markers of Pima cotton substituted in Upland cotton lines. Proceedings 1890 Association of Research Directors, Biennial Research Symposium, April 9-11, 2011, Atlanta, GA. CD ROM.
Saha, S., Wu, J., Jenkins, J.N., McCarty, J.C., Hayes, R.W., Stelly, D.M. 2011. Delineation of interspecific epistasis on fiber quality traits in Gossypium hirsutum by ADAA analysis of intermated G. barbadense chromosome substitution lines. Theoretical and Applied Genetics. 122:1351-1361.
McCarty Jr., J.C., Cash, L., Jenkins, J.N. 2011. Effects of within-row plant spacings on growth, boll retention, and yield of four cotton cultivars. Mississippi Agricultural and Forestry Experiment Station Bulletin 1191. 12 p.
Wu, J., Jenkins, J.N., McCarty Jr., J.C. 2011. A generalized approach and computer tool for quantitative genetics study. Proceedings Applied Statistics in Agriculture, April 25-27, 2010, Manhattan, KS. p.85-106.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S. 2010. Genetic effects of individual chromosomes in cotton cultivars detected by using chromosome substitution lines as genetic probes. Genetica. 138:1171-1179.
Gutierrez, O., Robinson, A.F., Jenkins, J.N., McCarty Jr., J.C., Wubben, M., Callahan, F.E., Nichols, R.L. 2011. Identification of QTL regions and SSR markers associated with resistance to reniform nematode in Gossypium barbadense L. accession GB713. Theoretical and Applied Genetics. 122:271-280.
Gutierrez, O.A., Robinson, A.F., Jenkins, J.N., McCarty Jr, J.C., Wubben, M., Callahan, F.E. 2010. QTL analysis of resistance to reniform nematode in Gossypium barbadense L. accession GB713. Agronomy Abstracts, American Society of Agronomy, October 31-November 3, 2010, Longbeach, CA. CD ROM.
Gutierrez, O.A., Jenkins, J.N., McCarty Jr., J.C., Wubben, M., Hayes, R.W., Callahan, F.E. 2010. SSR markers closely associated with genes for resistance to root-knot nematode on chromosomes 11 and 14 of upland cotton. Theoretical and Applied Genetics. 121:1323-1337.
An, C., Jenkins, J.N., McCarty Jr., J.C., Saha, S. 2010. Atypical Ligon Lintless-2 Phenotype in Cotton. Journal of Cotton Science. 14:13-16.
Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Hayes, R.W., Stelly, D. 2010. Genetic Dissection of Chromosome Substitution Lines of Cotton to Discover Novel Gossypium barbadense L. Alleles for Improvement of Agronomic Traits. Journal of Theoretical and Applied Genetics. 120:1193-1205.
Wu, J., McCarty Jr., J.C., Jenkins, J.N. 2010. Cotton Chromosome Substitution Lines Crossed with Cultivars: Genetic Model Evaluation and Seed Trait Analyses. Theoretical and Applied Genetics. 120:1473-1483.
Wu, J., McCarty Jr, J.C., Jenkins, J.N., Meredith Jr, W.R. 2010. Breeding potential of introgressions into cotton: genetic effects and heterosis. Plant Breeding. 129:526-532.
An, C., Jenkins, J.N., Wu, J., Guo, Y., McCarty Jr., J.C. 2010. Use of Fiber and Fuzz Mutants to Detect QTL for Yield Components, Seed, and Fiber Traits of Upland Cotton. Euphytica. 172:21-34.
Jenkins, J.N., McCarty Jr., J.C., Wu, J., Gutierrez, O. 2009. Genetic variance components and genetic effects among eleven diverse upland cotton lines and their F2 hybrids. Euphytica. 167:397-408.
Gutierrez, O.A., Stelly, D.M., Saha, S., Jenkins, J.N., McCarty Jr., J.C., Raska, D.A., Scheffler, B.E. 2009. Integrative placement and orientation of non-redundant SSR loci in cotton linkage groups by deficiency analysis. Molecular Breeding. 23:693-707.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Thaxton, P. 2009. Seed trait evaluation of Gossypium barbadense L. chromosomes/arms in a G. hirsutum L. background. Euphytica. 167:371-380.
Wu, J., McCarty Jr., J.C., Saha, S., Jenkins, J.N., Hayes, R.W. 2009. Genetic Changes in Plant Growth and their Associations with Chromosomes from Gossypium hirsutum L. in G. hirsutum L. Genetica. 137:56-66.
Wu, J., Jenkins, J.N., McCarty Jr., J.C. 2009. Testing variance components by two jackknife methods. In: Applied Statistics In Agriculture Conference Proceedings, April 27-29, 2008, Manhattan, KS. pp. 1-17.
Wallace, T.P., Bowman, D., Campbell, B.T., Chee, P., Gutierrez, O.A., Kohel, R.J., McCarty, J., Myers, G., Percy, R., Robinson, F., Smith, W., Stelly, D.M., Stewart, J.M., Thaxton, P., Ulloa, M., Weaver, D.B. 2009. Status of the USA cotton germplasm collection and crop vulnerability. Genetic Resources and Crop Evolution 56:507-532.
Guo, Y., McCarty Jr., J.C., Jenkins, J.N., An, C., Saha, S. 2009. Genetic detection of node of first fruiting branch in crosses of a cultivar with two exotic accessions of upland cotton. Euphytica. 166:317-329.
Wu, J., Gutierrez, O. A., Jenkins, J.N., McCarty Jr., J.C., Zhu, J. 2009. Quantitative analysis and QTL mapping for agronomic and fiber traits in an RI population of Upland cotton. Euphytica. 165:231-245.
Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Hayes, R.W., Bowman, D.T., Watson, C.E., Jones, D.C. 2008. Registration of RMUP-C5, a random mated population of Upland cotton germplasm. Journal of Plant Registrations. 2:239-242.
Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Interspecific chromosome substitution lines as genetic resources for improvement, trait analysis and genomic inference [abstract]. Cotton Science. 20(S):84.
Saha, S., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Chromosome substitution lines: useful genomic resources in cotton [abstract]. Cotton Science. 20(S):111.
An, C., Jenkins, J.N., Saha, S., McCarty Jr., J.C. 2008. A novel allele of Li-2 producing different types of fibers in cotton seeds in different branches of the same plant [abstract]. Agronomy Abstracts. CD-ROM.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2008. Enhancement and diversity of primitive cotton, Gossypium hirsutum L., accessions. In Proceedings 18th EUCARPIA General Congress - Modern Vareity Breeding for Present and Future Needs, Septembeer 9-12, 2008, Valencia, Spain. p. 185-189.
Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Stelly, D.M. 2008. Interspecific chromosome substitution lines in the genetic improvement of Upland cotton. Agronomy Abstracts. Paper No. 718-8.
Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Stelly, D.M. 2008. Genetic analysis of agronomic and fiber traits using four interspecific chromosome substitution lines in cotton. Plant Breeding. 127:612-618.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Percy, R.G. 2008. Genetic association of lint yield with its components in cotton chromosome substitution lines. Euphytica. 164:199-207.
Wu, J., Jenkins, J.N., McCarty Jr., J.C. 2008. Evaluation of cotton chromosome substitution lines crossed with high fiber strength lines [abstract]. National Cotton Council Beltwide Cotton Conference. p. 904.
Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2008. Chromosome substitution lines (CS-B) revealed the presence of cryptic beneficial alleles in G. barbadense with potential to increase lint and seed cotton yield in Upland cotton [abstract]. National Cotton Council Beltwide Cotton Conference. p. 831.
Guo, Y., McCarty Jr., J.C., Jenkins, J.N., Saha, S. 2008. QTLs for node of first fruiting branch in a cross of an upland cotton, Gossypium hirsutum L., cultivar with primitive accession Texas 701. Euphytica. 163:113-122.
McCarty Jr., J.C., Jenkins, J.N., Wu, J., Gutierrez, O.A., Hayes, R.W. 2008. Evaluation of cotton populations for agronomic and fiber traits after different cycles of random mating. Mississippi Agricultural and Forestry Experiment Station Bulletin 1168. 16 p.
McCarty Jr., J.C., Wu, J., Jenkins, J.N. 2008. Genetic association of cotton yield with its component traits in derived primitive accessions crossed by elite Upland cultivars using the conditional ADAA genetic model. Euphytica. 161:337-352.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Thaxton, P. 2007. Association of seed traits with specific Pima 3-79 chromosomes in a TM-1 background. Agronomy Abstracts. CD-ROM.
Robinson, A.F., Augudelo, P., Avila, C.A., Bell, A.A., Callahan, F.E., Cook, C.G., Dighe, N.D., Gutierrez, O.A., Hayes, R.W., Jenkins, J.N., Johnson, J.T., Kantety, R., Lawrence, G.W., Lawrence, K.S., Mangineni, L., Mccarty, J.C., Menz, M.A., Meredith, W.A., Nichols, R.L., Robbins, R.T., Sacks, E., Scheffler, B., Sciumbato, G.L., Smith, C.W., Starr, J.L., Stelly, D.M., Stetina, S.R., Stewart, J.M., Thaxton, P.M., Wallace, T.P., Weaver, D.B., Wubben, M.J., Young, L.D. 2008. Development of reniform nematode resistance in Upland cotton. In: Proceedings of the World Cotton Research Conference-4, September 10-14, 2007, Lubbock, Texas. 2008 CDROM.
Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Hayes, R.W., Bowman, D.T., Watson, C.E., Jones, D. 2007. Notice of release of RMUP-C5, a random mated population of Upland cotton germplasm. USDA, Mississippi Agricultural and Forestry Experiment Station, North Carolina Agricultural Research Service, and Cotton, Inc. Germplasm Release. 4/30/07. 6 p.
Jenkins, J.N., McCarty Jr., J.C., Wu, J., Saha, S., Gutierrez, O.A., Hayes, R.W., Stelly, D.M. 2007. Genetic effects of thirteen Gossypium barbadense L. chromosome substitution lines in topcrosses with upland cotton cultivars: II. Fiber quality traits. Crop Science. 47:561-572.
Creech, R.G., Jenkins, J.N., McCarty Jr., J.C., Hayes, R.W., Creech, J.B., Haire, D., Cantrell, R. 2007. Registration of MS-01RKN, MS-24RKN, MS-30RKN, MS-33RKN, MS-35RKN and MS-37RKN cotton germplasm lines with resistance to root-knot nematode. Journal of Plant Registrations. 1:147-148.
Gutierrez, O., Jenkins, J.N., McCarty Jr., J.C., Bowman, D.T., Watson, C.E., Jones, D.C., Cantrell, R. 2007. Development and release of C5 breeding populations of cotton developed through random mating [abstract]. National Cotton Council Beltwide Cotton Conference. p. 639.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Wallace, T. 2007. Determination of chromosome effects for cotton cultivars crossed with chromosome substitution lines and TM-1 [abstract]. National Cotton Council Beltwide Cotton Conference. p. 2115.
Guo, Y., MCcarty Jr., J.C., Jenkins, J.N., Saha, S., Wu, J. 2007. QTL analyses of flowering time in a primitive cotton accession (Gossypium hirsutum L.)[Abstract]. National Cotton Council Beltwide Cotton Conference. p. 231.
McCarty Jr., J.C., Wu, J., Jenkins, J.N. 2007. Use of primitive derived cotton accessions for agronomic and fiber traits improvement: Variance components and genetic effects. Crop Science. 47:100-110.
Jenkins, J.N., MCcarty Jr., J.C., Hayes, R.W., Creech, R.G., Creech, J.B., Haire, D.L. 2006. Notice of release of six root-knot nematode resistant upland cotton germplasm lines. USDA and Mississippi Agricultural and Forestry Experiment Station Germplasm Release. 11/14/2006. 3 p.
Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Stelly, D.M. 2006. Interspecific chromosome substitution lines in upland cotton improvement. International Cotton Genome Initiative Workshop. p. 11.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Zhong, M., Swindle, M. 2007. AFLP marker associations with agronomic and fiber traits in cotton. Euphytica. 153:153-163.
Ynturi, P., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Saha, S. 2006. Association of root-knot nematode resistance genes with simple sequence repeat markers on two chromosomes in cotton. Crop Science. 46:2670-2674.
Gutierrez, O.A., Bowman, D.T., Cole, C.B., Jenkins, J.N., McCarty Jr., J.C., Wu, J., Watson, C.E. 2006. Development of random-mated populations using bulked pollen methodology: Cotton as a model. Journal of Cotton Science. 10:175-179.
McCarty Jr., J.C., Wu, J., Saha, S., Jenkins, J.N., Hayes, R.W. 2006. Effects of chromosome 5sh from Gossypium hirsutum L. on flower production in G. hirsutum L. Euphytica. 152:99-107.
Jenkins, J.N., Wu, J., McCarty Jr., J.C., Saha, S., Gutierrez, O.A., Hayes, R.W., Stelly, D.M. 2006. Genetic effects of thirteen Gossypium hirsutum L. chromosome substitution lines in topcrosses with upland cotton cultivars: I. Yield and yield components. Crop Science. 46:1169-1178.
Gutierrez, O.A., Wu, J., Jenkins, J.N., McCarty, Jr., J.C., Raska, D.A., Stelly, D.M. 2006. An intraspecific SSR linkage map of cotton. National Cotton Council Beltwide Cotton Conference. p. 826.
Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Gutierrez, O.A., Percy, R.G., Cantrell, R.G., Stelly, D.M. 2006. Effects of chromosome-specific introgression in upland cotton on fiber and agronomic traits. Genetics. 172:1927-1938.
McCarty, J.C., Wu, J., Jenkins, J.N. 2006. Genetic diversity for agronomic and fiber traits in day-neutral primitive cotton germplasm. Euphytica. 148:283-293.
Gutierrez, O.A., Saha, S., Jenkins, J.N., MCcarty Jr., J.C., Raska, D.A., Stelly, D.M. 2006. SSR-facilitated Gossypum hirsutum L. marker localization and linkage group identification using interspecific hypoaneuploid hybrids [abstract]. Plant and Animal Genome VX Conference Abstracts. CD-ROM.
Gutierrez, O.A., Wu, J., Jenkins, J.N., McCarty Jr, J.C., Raska, D.A., Stelly, D.M. 2005. An SSR linkage map of upland cotton, Gossypium hirsutum L. [abstract]. Agronomy Abstracts. Abstract No. 48-6.
Wu, J., Wu, D., Jenkins, J.N., McCarty Jr., J.C. 2006. A recursive approach to detect multivariable conditional variance components and conditional random effects. Computational Statistics and Data Analysis. 50:285-300.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Wu, D. 2006. Variance component estimation using the additive, dominance, and additive x additive model when genotypes vary across environments. Crop Science. 46:174-179.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Saha, S., Stelly, D.M. 2006. An additive-dominance model to determine chromosomal effects in chromosome substitution lines and other germplasms. Theoretical and Applied Genetics. 112:391-399.
Stelly, D.M., Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A. 2005. Registration of 17 upland (Gossypium hirsutum) cotton germplasm lines disomic for different G. barbadense chromosome or arm substitutions. Crop Science. 45:2663-2665.
McCarty Jr., J.C., Jenkins, J.N. 2005. Registration of 14 primitive derived cotton germplasm lines with improved fiber strength. Crop Science. 45:2668.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Watson, C.E. 2005. Comparisons of two statistical models for evaluating boll retention in cotton. Agronomy Journal. 97:1291-1294.
McCarty Jr., J.C., Jenkins, J.N. 2005. Registration of 21 day length-neutral flowering primitive cotton germplasm lines. Crop Science. 45:2134.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2005. Potential of primitive accessions for cotton improvement. Mississippi Agricultural and Forestry Experiment Station Technical Bulletin 1141. 22 p.
McCarty Jr., J.C., Wu, J., Jenkins, J.N., Guo, X. 2005. Evaluating American and China cotton cultivars and their crosses for improvement. Cotton Science. 17:47-55.
Cash, L., Jenkins, J.N., McCarty Jr., J.C. 2005. Influence of four plant populations on boll retention and lint yield on four commercial cultivars [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1019.
Lafoe, J.M., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Robinson, A.F. 2005. Resistance to reniform nematode in exotic cotton lines [abstract]. National Cotton Council Beltwide Cotton Conference. p.1068.
Jenkins, J.N., McCarty Jr., J.C. 2005. Effects of VIP on selected cotton insect pests in field and laboratory experiments [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1046.
Wu, J., Jenkins, J.N., McCarty Jr., J.C. 2005. Mixed model based conditional analysis for complex traits [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1010.
Miller, H.T., Jenkins, J.N., McCarty Jr., J.C. 2005. Growth and fruiting habits of DP 555 BG/RR in various row patterns and plant spacings [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1001.
Gutierrez, O.A., Jenkins, J.N., McCarty Jr., J.C., Bowman, D.T., Watson, C.E. 2005. Development of breeding populations in cotton through random mating [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1000.
Robinson, A.F., Bridges, A.C., Percival, A.E., Gutierrez, O.A., LaFoe, J.M., McCarty, Jr., J.C., Jenkins, J.N. 2005. Detection of reniform nematode resistance in primitive Gossypium hirsutum and G. barbadense during a survey of the U.S. National Cotton Collection and initiation of research to incorporate resistance into agronomic cotton [abstract]. In: Proceedings of the Beltwide Cotton Conferences, January 4-7, 2005, New Orleans, Louisiana. 2005 CDROM.
Wu, J., Zhu, J., Jenkins, J.N., McCarty Jr., J.C. 2005. Constructing linkage maps with achiasmatic gametogenesis. Acta Genetica Sinica. 32:608-615.
McCarty Jr., J.C., Jenkins, J.N. 2004. Primitive cotton germplasm: yield and fiber traits for twenty-one day-neutral accessions. Mississippi Agricultural and Forestry Experiment Station Research Report 23(14). 6 p.
Saha, S., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Stelly, D.M., Percy, R.G., Raska, D.A. 2004. Effect of chromosome substitutions from Gossypium hirsutum L. 3-79 into G. hirsutum L. TM-1 on agronomic and fiber traits. Journal of Crop Science. 8:162-169.
Saha, S., Jenkins, J.N., Wu, J., McCarty Jr., J.C., Percy, R.G., Cantrell, R.G., Stelly, D.M. 2004. Cytogenetic resources in dissecting complex QTLs and enhancing germplasm in upland cotton. International Cotton Genome Initiative ICG-2004 Workshop Proceedings. p. 81.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2004. Use of primitive accessions in cotton improvement. In: Fischer, T., editor. Proceedings 4th International Crop Science Congress, September 26-October 1, 2004, Brisbane, Australia. 2004 CDROM.
Jenkins, J.N., McCarty Jr., J.C., Wu, J., Saha, S., Stelly, D. Chromosome substitution lines from Gossypium barbadense L. as sources for G. hirsutum L. improvement. In: Fisher, T., editor. Proceedings 4th International Crop Science Congress, September 26-October 1, 2004, Brisbane, Australia. 2004 CDROM.
Ulloa, M., Saha, S., Jenkins, J.N., Meredith, Jr., W.R., McCarty, Jr., J.C., Stelly, D.M. 2005. Chromosomal assignment of RFLP linkage groups harboring important QTLs on an intraspecific cotton (Gossypium hirsutum L.) joinmap. Journal of Heredity. 96(2):132-144.
Wu, J., Jenkins, J.N., McCarty Jr., J.C., Zhu, J. 2004. Genetic association of yield with its component traits in a recombinant inbred population of cotton. Euphytica. 149:171-179.
McCarty Jr., J.C., Jenkins, J.N. 2004. Notice of release of 14 upland cotton, Gossypium hirsutum L., primitive derived germplasm lines with improved fiber strength. Official Release of USDA, ARS and Mississippi Agricultural and Forestry Experiment Station. 7/29/04.
Wu, J., Jenkins, J.N., McCarty Jr., J.C. 2005. Distribution of boll number and lint yield by time and position in upland cotton cultivars. Applied Statistics In Agriculture Conference Proceedings. p. 296-309.
Saha, S., Jenkins, J.N., McCarty, Jr., J.C., Wu, J., Gutierrez, O.A., Cantrell, R.G., Percy, R.G., Stelly, D.M. 2004. Chromosome substitution lines: important genomic resources in cotton. Biotechnology Symposium Proceedings, Alabama A&M University. CD-ROM.
Stelly, D.M., Raska, W., Jenkins, J.N., McCarty, J.C., Gutierrez, O.A. Notice of release of 17 germplasm lines of upland (Gossypium hirsutum) cotton, each with a different pair of G. barbadense chromosomes or arms substituted for the respective G. hirsutum chromosomes or arms. Official Release of USDA, ARS and Mississippi Agricultural and Forestry Experiment Station, 5/04/04.
McPherson, M.G., Jenkins, J.N., Watson, C.E., McCarty Jr., J.C. 2004. Inheritance of root-knot nematode resistance in M-315 RNR and M78-RNR cotton. Journal of Cotton Science. 8:154-161.
McCarty Jr., J.C., Jenkins, J.N. 2004. Notice of release of 21 Bc4f4 noncommercial flowering day neutral germplasm lines of upland cotton involving Gossypium hirsutum L. race accessions. Germplasm Release. Official Release of USDA, ARS and Mississippi Agricultural and Forestry Experiment Station, 3/22/04.
Jenkins, J.N., Wu, J., McCarty Jr, J.C., Reddy, U., Zhu, J. 2004. A recombinant inbred population of cotton for QTL and DNA marker association. World Cotton Research Conference Proceedings. p. 352.
Stelly, D.M., Saha, S., Raskal, D.A., Wu, J., Jenkins, J.N., McCarty Jr., J.C., Gutierrez, O.A., Percy, R.G., Gardunial, B., Dighel, N. 2004. Chromosome-specific resources for germplasm introgression and genomics in Gossypium [abstract]. Plant and Animal Genomes XII Conference Proceedings. Paper no. W187.
Miller, H.T., Jenkins, J.N., McCarty Jr, J.C. 2004. Growth and fruiting habits of DP 555 BG/RR in various row patterns and plant spacings [abstract]. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1117.
Wu, J., Jenkins, J.N., McCarty Jr, J.C. 2004. Comparing two methods in evaluation of boll retentionm [abstract]. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1118.
Ynturi, P., Jenkins, J.N., McCarty Jr, J.C., Saha, S. 2004. Segregation for root-knot nematode resistance gene(s)in F2 populations from resistant x susceptible crosses [abstract]. National Cotton Council Beltwide Cotton Conference. p. 1112.
Stelly, D.M., Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr, J.C., Gutierrez, O.A. 2004. Notice of release of 17 germplasm lines of upland (Gossypium hirsutum), each with a different pair of G. barbadense chromosomes or arms substituted for the respective G. hirsutum chromosomes or arms. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1205-1207.
Gutierrez, O.A., Jenkins, J.N., McCarty Jr, J.C., Bowman, D.T., Watson, C.E. 2004. Genetic distance among cotton cultivars used in the development of random mating populations based on SSR markers and coefficient of parentage [abstract]. Proceedings National Cotton Council Beltwide Cotton Conference. p. 1061.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2004. Primitive accession derived germplasm by cultivar crosses as sources for cotton improvement: I. Phenotypic values and variance components. Crop Science. 44:1226-1230.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2004. Primitive accession derived germplasm by cultivar crosses as sources for cotton improvement: II. Genetic effects and genotypic values. Crop Science. 44:1231-1235.
Bezawada, C., Saha, S., Jenkins, J.N., Creech, R.C., McCarty, J.C. 2003. SSR marker(s) associated with root-knot nematode resistance gene(s) in cotton. Journal of Cotton Science. 7:179-184.
CHEATHAM, C.L., JENKINS, J.N., MCCARTY JR, J.C., WATSON, C.E., WU, J. GENETICS VARIANCES AND COMBINING ABILITY OF CROSSES AND AMERICAN CULTIVARS, AUSTRALIAN CULTIVARS, AND WILD COTTONS. JOURNAL OF COTTON SCIENCE. 2003. V.7.P.16-22.
Wu, J., Jenkins, J.N., Zhu, J., McCarty, J.C., Watson, C.E. 2003. Comparisons of quantitative trait locus mapping properties between two methods of recombinant inbred line development. Euphytica. 132:159-166.
Saha, S., Raska, D.A., Jenkins, J.N., McCarty Jr, J.C., Gutierrez, O.A., Percy, R.G., Cantrell, R.G., Wu, J., Zhu, J., Stelly, D.M. 2004. Effect of chromosome on important quantitative traits of agronomic and fiber traits using Gossypium barbadense chromosome-specific recombinant lines of Gossypium hirsutum. World Cotton Research Conference Proceedings. p. 170-174.
McCarty Jr, J.C., Jenkins, J.N., Wu, J. 2004. Primitive accessions of cotton as genetic sources for improving yield and fiber properties. World Cotton Research Conference Proceedings. p. 114-118.
MCCARTY JR, J.C., HEDIN, P.A. GENETICALLY BASED INCREASES IN COTTON PLANT LINT BIOSYNTHESIS. MISSISSIPPI AGRICULTURAL AND FORESTRY EXPERIMENT STATION RESEARCH REPORT. 2003. v.20.4p.
Wu, J., Jenkins, J.N., Zhu, J., McCarty, J.C., Watson, C.E. 2003. Monte carlo simulations on marker grouping and ordering. Theoretical Applied Genetics. 107:568-573.
MCCARTY JR, J.C., JENKINS, J.N., WU, J. USE OF PRIMITIVE ACCESSIONS OF COTTON AS SOURCES OF GENES FOR IMPROVING YIELD COMPONENTS AND FIBER PROPERTIES. MISSISSIPPI AGRICULTURAL AND FORESTRY EXPERIMENT STATION TECHNICAL BULLETIN 1130. 2003. 17p.
KATAM, R., QURESHI, S.N., WU, J., SAHA, S., JENKINS, J.N., MCCARTY JR, J.C., REDDY, U.K., KANTETY, R.V., ZHU, J. EST-SSR: USEFUL MARKERS FOR MOLECLAR MAPPING IN COTTON. CD-ROM. Proceedings Beltwide Cotton Conference. 2003. p. 884.
COLE, C.B., JENKINS, J.N., MCCARTY JR, J.C. WITHIN BOLL YIELD COMPONENTS OF SIX CULTIVARS OF COTTON AND THEIR F1 AND F2 PROGENY. CD-ROM. Proceedings Beltwide Cotton Conference. 2003. p. 824
WU, J., JENKINS, J.N., MCCARTY JR, J.C., ZHU, J. APPLICATIONS OF MIXED LINEAR MODEL APPROACHES ON COTTON QUANTITATIVE GENETICS. CD-ROM. Proceedings Beltwide Cotton Conference. 2003. p. 825.
GUTIERREZ, O.A., JENKINS, J.N., MCCARTY JR, J.C., BOWMAN, D.T., WATSON, C.E. POTENTIAL USE OF BULKED-POLLEN METHODOLOGY IN COTTON. CD-ROM. Proceedings Beltwide Cotton Conference. 2003. p. 784.
ZHANG, X., JENKINS, J.N., CALLAHAN, F.E., CREECH, R.G., SI, Y., MCCARTY JR, J.C., SAHA, S., MA, D. MOLECULAR CLONING, DIFFERENTIAL EXPRESSION, AND FUNCTIONAL CHARACTERIZATION OF A FAMILY OF CLASS I UBIQUITIN-CONJUGATING ENZYME (E2) GENES IN COTTON (GOSSYPIUM). BIOCHIMICA ET BIOPHYSICA ACTA. 2003. v.1625.p.269-279.
McCarty Jr., J.C., Jenkins, J.N., Wu, J. 2004. Primitive accessions of cotton as genetic sources for improving yield and fiber properties. World Cotton Research Conference Proceedings. p. 113-118.
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