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Yulin Jia
Dale Bumpers National Rice Research Center
Research Leader

Phone: (870) 672-6107
Fax: (870) 673-7581

(Employee information on this page comes from the REE Directory. Please contact your front office staff to update the REE Directory.)

Projects
Broadening and Strengthening the Genetic Base of Rice for Adaptation to a Changing Climate, Crop Production Systems, and Markets
In-House Appropriated (D)
  Accession Number: 445546
USDA/ARS/HKDSNARC and UAPB Aquaculture and Fisheries Department Cooperative Aquaculture Research, Technology Transfer, and Stakeholder Engagement
Memorandum of Understanding (M)
  Accession Number: 442508
Characterizing the Genomic Basis of Weedy Rice Competitiveness
Reimbursable Cooperative Agreement (R)
  Accession Number: 438310
Deep Learning to Predict the Effects of Rice Genomic Sequence Variants on Gene Expression and Phenotypes
Non-Assistance Cooperative Agreement (S)
  Accession Number: 446515
Genetic Analysis of the Sheath Blight Resistance in IR8 and Functional Analysis of the Candidate Gene OsABC9 to Rhizoctonia Solani
Non-Assistance Cooperative Agreement (S)
  Accession Number: 442658
TeraHerz (THz) Raman and X-Ray Diffraction (XRD) Characterization of Dietary Fiber
Non-Assistance Cooperative Agreement (S)
  Accession Number: 443517
Risk Assessment of Emerging Diseases Caused by Pantoea spp. on Rice, Peanut, and Corn in the USA in Collaboration with Colorado State University
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444073
Risk Assessment of Emerging Diseases Caused by Pantoea spp. on Rice, Peanut, and Corn in the USA in Collaboration with Oklahoma State University
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444089
Risk assessment of emerging diseases caused by Pantoea spp. on rice, peanut, & corn in the USA in Collaboration with Texas A&M University-Beaumont
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444177
Risk assessment of emerging diseases caused by Pantoea spp. on rice, peanut, & corn in the USA in Collaboration with Texas A&M-Amarillo
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444179
Identification and Characterization of Novel Resistance Genes to Rice Blast Disease
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444462
Assessment of Rice Production Under Selected Abiotic and Biotic Stress Environments
Non-Assistance Cooperative Agreement (S)
  Accession Number: 444580

Publications (Clicking on the reprint icon Reprint Icon will take you to the publication reprint.)
Registration of three long grain rice germplasm lines with improved blast resistance with the Ptr gene, low chalk, excellent milling quality, and good yield - (Peer Reviewed Journal)
Impacts of multiple dry downs on rice yield, processing grain quality traits and greenhouse gases - (Proceedings)
Challenges and opportunities of rice disease managements in the USA - (Proceedings)
Jia, Y., Osakina, A., Huang, Y., Pedrozo, R., Wang, L., Huggins, T.D., Jia, M.H., Ponniah, S., Nicolli, C., Dalla Lana, F., Wang, G., Yang, Y., Luna, E., Leach, J. 2024. Challenges and opportunities of rice disease managements in the USA. Meeting Abstract. 2024 International Symposium of Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Identification of genetic loci for grain traits and disease resistance reveals a potential trade off in rice Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Jia, M.H., Dunlap, H.N. 2024. Identification of genetic loci for grain traits and disease resistance reveals a potential trade off in rice. PhytoFrontiers. https://doi.org/10.1094/PHYTOFR-03-24-0025-R.
The effects of abiotic stressors on rice resistance responses to the blast fungus Magnaporthe oryzae - (Proceedings)
Huang, Y., Jia, Y. 2024. The effects of abiotic stressors on rice resistance responses to the blast fungus Magnaporthe oryzae. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Understanding blast resistance through overexpression of the Pita-2 gene in rice - (Proceedings)
Ponniah, S., Mutethia, R., Jia, Y. 2024. Understanding blast resistance through overexpression of the Pita-2 gene in rice. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Genomic analysis of sheath blight resistance in rice: identifying resistant accessions and key genetic markers - (Proceedings)
Pedrozo, R., Osakina, A., Nicolli, C., Jia, Y. 2024. Genomic analysis of sheath blight resistance in rice: identifying resistant accessions and key genetic markers. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Functional analysis of a new allele of the broad-spectrum rice blast resistance gene Ptr in weedy species of rice - (Proceedings)
Osakina, A., Olsen, K., Jia, Y. 2024. Functional analysis of a new allele of the broad-spectrum rice blast resistance gene Ptr in weedy species of rice. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Receptor-ligand interactions in the rice blast system revealed by AlphaFold protein structure prediction - (Proceedings)
Wang, L., Jia, Y., Olsen, K., Huang, Y., Jia, M.H., Sathish, P., Pedrozo, R., Nicolli, C., Edwards, J. 2024. Receptor-ligand interactions in the rice blast system revealed by AlphaFold protein structure prediction. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Development, gene discovery and allele mining of a global tropical japonica core collection - (Proceedings)
Huggins, T.D., Edwards, J., Mcclung, A., Jia, Y., Jia, M.H., Jackson, A.K., Sells, L.J., Lawrence, B.S. 2024. Development, gene discovery and allele mining of a global tropical japonica core collection. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11, 2024. Little Rock/Stuttgart, Arkansas.
Characterization of the uniform regional rice nursery (URRN) for blast and quality using molecular markers for US rice breeding programs. - (Proceedings)
Jia, M.H., Christensen, E.F., Angira, B., Fjellstrom, R.G., Edwards, J., Jia, Y. 2024. Characterization of the uniform regional rice nursery (URRN) for blast and quality using molecular markers for US rice breeding programs. Abstract. 2024 International Symposium on Rice Functional Genomics, September 9-11-2024. Little Rock/Stuttgart, Arkansas.
Rice germplasm characterization and enhancement for the sustainability and resilience of the US rice industry using functional genomics toolsand stress tolerance - (Proceedings)
Jia, Y., Edwards, J., Pinson, S.R., Eizenga, G.C., Huggins, T.D., Rohila, J.S., Jia, M.H., Jackson, A.K. 2024. Rice germplasm characterization and enhancement for the sustainability and resilience of the US rice industry using functional genomics toolsand stress tolerance. Proceedings. 21st International Symposium on Rice Functional Genomics, Little Rock, Arkansas. September 9-11, 2024.
Improving rice milling quality by identifying and deploying loci affecting kernel fissure resistance - (Proceedings)
Pinson, S.R., Jia, Y., Edwards, J. 2024. Improving rice milling quality by identifying and deploying loci affecting kernel fissure resistance. Proceedings. 21st International Symposium on Rice Functional Genomics, Little Rock, Arkansas. September 9-11, 2024.
USDA ARS develops a new production system for food sustainability and security - (Other)
Jia, Y., Green, B.W., Fuller, S.A. 2024. USDA ARS develops a new production system for food sustainability and security. Abstract. 2024 University of Arkansas Field Day, August 1, 2024. Stuttgart, Arkansas.
USDA ARS DB NRRC research on rice sustainability and tolerance to biotic & abiotic stresses - (Other)
Edwards, J., Jia, Y., Pinson, S.R., Rohila, J.S., Huggins, T.D., Jia, M.H., Jackson, A.K., Eizenga, G.C. 2024. USDA ARS DB NRRC research on rice sustainability and tolerance to biotic & abiotic stresses. Abstract. 2024 University of Arkansas Field Day, August 1, 2024. Stuttgart, Arkansas.
USDA ARS has hidden treasure! genetic discoveries in the USDA collection of world rice varieties - (Other)
Eizenga, G.C., Jia, Y., Edwards, J., Pinson, S.R., Huggins, T.D., Rohila, J.S., Jia, M.H., Jackson, A.K. 2024. USDA ARS has hidden treasure! genetic discoveries in the USDA collection of world rice varieties. Abstract. University of Arkansas 2024 Rice Field Day, August 1, 2024, Stuttgart, Arkansas.
USDA ARS develops pre-breeding rice germplasm for enhanced yield, grain quality and stress tolerance - (Other)
Jia, M.H., Jackson, A.K., Edwards, J., Pinson, S.R., Huggins, T.D., Eizenga, G.C., Rohila, J.S., Jia, Y. 2024. USDA ARS develops pre-breeding rice germplasm for enhanced yield, grain quality and stress tolerance. Abstract. University of Arkansas Rice Field Day, August 1, 2024, Stuttgart, Arkansas.
Surveys of Magnaporthe oryzae genotypes in breeding stations and commercial rice fields in Arkansas, Louisiana and Puerto Rico from 2017 to 2019 - (Abstract Only)
Yixiao, H., Jia, Y., Wamishe, Y., Jia, M.H. 2024. Surveys of Magnaporthe oryzae genotypes in breeding stations and commercial rice fields in Arkansas, Louisiana and Puerto Rico from 2017 to 2019. Abstract. Plant Health 2024, July 27-30, 2024. Memphia, Tennessee.
Unraveling the genetic diversity of Magnaporthe oryzae through a graph pangenome approach - (Abstract Only)
Wang, L., Jia, Y., Edwards, J. 2024. Unraveling the genetic diversity of Magnaporthe oryzae through a graph pangenome approach. Abstract. 2024 Plant Health Conference, July 27-30, 2024. Memphia, Tennessee.
Receptor- ligand interactions in plant inmate immunity revealed by artificial intelligence AlphaFold Reprint Icon - (Peer Reviewed Journal)
Wang, L., Jia, Y., Osakina, A., Olsen, K., Huang, Y., Jia, M.H., Ponniah, S., Pedrozo, R., Nicolli, C., Edwards, J. 2024. Receptor- ligand interactions in plant inmate immunity revealed by artificial intelligence AlphaFold. Bio-Archives. https://doi.org/10.1101/2024.06.12.598632.
Using major resistance genes to manage rice blast disease in the USA - (Abstract Only)
Jia, Y. 2024. Using major resistance genes to manage rice blast disease in the USA. Meeting Abstract. 9th International Rice and Wheat Blast Conference, June 10-14, 2024. Panama City, Panama.
Identification of blast resistance QTLs in black hull awn weedy rice (RR14) and Aus-196 rice variety - (Abstract Only)
Osakina, A., Olsen, K., Jia, Y. 2024. Identification of blast resistance QTLs in black hull awn weedy rice (RR14) and Aus-196 rice variety. Abstract. Plant Health 2024, July 27-30, 2024. Memphis, Tennessee.
Genomic insights for enhanced sheath blight resistance in rice (Oryza sativa L.) - (Abstract Only)
Pedrozo, R., Osakina, A., Nicolli, C., Jia, Y. 2024. Genomic insights for enhanced sheath blight resistance in rice (Oryza sativa L.). Abstract. Plant Health 2024, July 27-30, 2024. Memphis, Tennessee.
Understanding the impact of seed-borne pantoea ananatis on rice crop - (Abstract Only)
Pedrozo, R., Huang, Y., Nicolli, C., Jia, Y. 2024. Understanding the impact of seed-borne pantoea ananatis on rice crop. Abstract. Plant Health 2024, July 27-30, 2024. Memphis, Tennessee.
Genomic insights and primer design for the rice pathogen, Pantoea ananatis - (Abstract Only)
Luna, E., Giebler, M., Nicolli, C., Jia, Y., Leach, J.E. 2024. Genomic insights and primer design for the rice pathogen, Pantoea ananatis. Abstract. Plant Health 2024, July 27-30, 2024. Memphia, Tennessee.
Pre-breeding studies focused on rice grown in temperate regions at the USDA-ARS Dale Bumpers National Rice Research Center - (Proceedings)
Introduction rice as a model for genetics, genomics, and breeding - (Abstract Only)
Jia, Y. 2024. Introduction rice as a model for genetics, genomics, and breeding. Meeting Abstract. Plant and Animal Genome, January 12-17, 2024. San Diego, California.
Establishing a global Tropical Japonica rice core collection for allele mining and gene discovery: construction, sequencing, and phenotyping - (Abstract Only)
Huggins, T.D., Edwards, J., McClung, A., Jia, Y., Jia, M.H., Jackson, A.K., Sells, L.J., Lawrence, B.S. 2024. Establishing a global Tropical Japonica rice core collection for allele mining and gene discovery: construction, sequencing, and phenotyping. Plant and Animal Genome Conference January 12-17, 2024, San Diego, California. Meeting Abstract.
A weed x ancestral cultivar cross identifies evolutionarily relevant weediness QTLs Reprint Icon - (Peer Reviewed Journal)
Li, X., Zhang, S., Lowey, D., Hissam, C., Clevenger, J., Jia, Y., Caicedo, A.L. 2023. A weed x ancestral cultivar cross identifies evolutionarily relevant weediness QTLs. Molecular Ecology. https://doi.org/10.1111/mec.17172.
An efficient method for screening rice breeding lines against races of Magnaporthe oryzae Reprint Icon - (Peer Reviewed Journal)
Oliveira-Garcia, E., Budot, B., Manangkil, J., Lana, F., Angira, B., Famoso, A., Jia, Y. 2024. An efficient method for screening rice breeding lines against races of Magnaporthe oryzae. Plant Disease. https://doi.org/10.1094/PDIS-05-23-0922-RE.
Rice germplasm and genetic stock oryza operating procedures and best management practices - (Other)
Huggins, T.D., Jia, Y. 2023. Rice germplasm and genetic stock oryza operating procedures and best management practices. Book Chapter.
Origin and history of Dale Bumpers National Rice Research Center (DB NRRC) - (Other)
Jia, Y. 2023. Origin and history of Dale Bumpers National Rice Research Center (DBNRRC). Abstract. 66(2):34-36. www.grandprairiehistory.org
Genetic diversity of weedy rice and its potential application as a novel source of disease resistance Reprint Icon - (Peer Reviewed Journal)
Osakina, A., Jia, Y. 2023. Genetic diversity of weedy rice and its potential application as a novel source of disease resistance. Plants. https://doi.org/10.3390/plants12152850.
Bacteria disinfection of rice seeds by ultraviolet light irradiation in a biosafe flow cabinet Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Read, Q.D. 2023. Bacteria disinfection of rice seeds by ultraviolet light irradiation in a biosafe flow cabinet. Plant Health Progress. https://doi.org/10.1094/PHP-02-23-0017-RS.
Elucidation of the molecular basis of the Ptr gene in Black Hull Awn (BHA) weedy rice mediated signaling transduction - (Abstract Only)
Osakina, A., Olsen, K.M., Jia, Y. 2023. Elucidation of the molecular basis of the Ptr gene in Black Hull Awn (BHA) weedy rice mediated signaling transduction. Abstract. Plant Health 2023, August 12-16, 2023. Denver, Colorado.
Regional diversity of Magnaporthe oryzae in the southern USA from 2017 to 2022 - (Abstract Only)
Huang, Y., Bianco, T., Wamishe, Y., Jia, Y. 2023. Regional diversity of Magnaporthe oryzae in the southern USA from 2017 to 2022. Abstract. Plant Health 2023, August 12-16, 2024. Denver, Colorado.
An efficient method for screening rice breeding lines against races of Magnaporthe oryzae - (Abstract Only)
Budot, B.O., Makagkil, J., Lana, F.D., Angire, B., Famoso, A., Jia, Y., Oliveira-Garcia, E. 2023. An efficient method for screening rice breeding lines against races of Magnaporthe oryzae. Abstract. Plant Health 2023, August, 12-16, 2023. Denver, Colorado.
Greenhouse-based method for studying disease development in rice for an emerging pathogen, Pantoea ananatis - (Abstract Only)
Giebler, M., Luna, E., Jia, Y., Leach, J. 2023. Greenhouse-based method for studying disease development in rice for an emerging pathogen, Pantoea ananatis. Abstract. Plant Health 2023, August 12-16, 2024. Denver, Colorado.
Characterization of the major sheath blight resistant QTL qShB9-2 on rice chromosome 9 - (Proceedings)
Jia, Y., Wang, G.L. 2024. Characterization of the major sheath blight resistant QTL qShB9-2 on rice chromosome 9. Rice Technical Working Group Meeting Proceedings, Hot Springs, Arkansas, February 20-23, 2024. p90.
A user-friendly rice seed disinfection by ultraviolet light irradiation in a biosafe flow cabinet - (Abstract Only)
Improvement and characterization of medium grain rice germplasm for US breeders and growers - (Proceedings)
Jia, Y., Jia, M.H., Dunlap, H.N., Lin, M.J. 2024. Improvement and characterization of medium grain rice germplasm for US breeders and growers. Rice Technical Working Group Meeting Proceedings, Hot Springs, Arkansas, February 20-23, 2024. p66.
Blast panel investigation of disease resistance of high yielding breeding lines - (Proceedings)
Dunlap, H.N., Jia, Y., Wang, X., Wamishe, Y., Jia, M.H. 2024. Blast panel investigation of disease resistance of high yielding breeding lines. Rice Technical Working Group Meeting Proceedings, Hot Springs, Arkansas, February 20-23, 2024. p93.
QTL mapping and genomic prediction of disease reactions of rice to the rice blast fungus M. oryzae races - (Proceedings)
Edwards, J., Sharma, S., Jia, M.H., Jia, Y. 2024. QTL mapping and genomic prediction of disease reactions of rice to the rice blast fungus M. oryzae races. Rice Technical Working Group Meeting Proceedings, Hot Springs, Arkansas, February 20-23, 2024.
Mapping blast resistance genes in rice varieties ‘Pecos’ and ‘M205’ - (Proceedings)
Jia, M.H., Lin, M.J., Mcclung, A.M., Jia, Y. 2024. Mapping blast resistance genes in rice varieties ‘Pecos’ and ‘M205’. Rice Technical Working Group Meeting Proceedings, Hot Springs, Arkansas, February 20-23, 2024. p94.
First report of rice bacterial leaf blight disease caused by Pantoea ananatis in the United States Reprint Icon - (Peer Reviewed Journal)
Luna, E., Lang, J., McClung, A.M., Wamishe, Y., Jia, Y., Leach, J. 2023. First report of rice bacterial leaf blight disease caused by Pantoea ananatis in the United States. Plant Disease. https://doi.org/10.1094/PDIS-08-22-2014-PDN.
Opportunities and challenges of rice genetics, genomics and breeding- path forward - (Abstract Only)
Jia, Y., Jia, M.H. 2023. Opportunities and challenges of rice genetics, genomics and breeding- path forward. Plant and Animal Genome Conference. San Diego, California. January 13-18, 2023.
Registration of a blast resistant premium medium grain rice germplasm Eclipse Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Jia, M.H. 2023. Registration of a blast resistant premium medium grain rice germplasm Eclipse. Journal of Plant Registrations. https://doi.org/10.1002/plr2.20253.
Rice as a model for genetics, genomics and breeding - (Abstract Only)
Jia, Y. 2022. Rice as a model for genetics, genomics and breeding. Plant and Animal Genome Conference Proceedings. Virtual Conference. January 8-12, 2022.
A gain-of-function of a candidate Pita-2 gene in rice (Oryza sativa cv. Nipponbare) for resistance against blast fungus (Magnaporthe oryzae) - (Abstract Only)
Mutethia, R., Jia, Y., Ponniah, S.K. 2022. A gain-of-function of a candidate Pita-2 gene in rice (Oryza sativa cv. Nipponbare) for resistance against blast fungus (Magnaporthe oryzae). Plant and Animal Genome 29 Conference. San Diego, California. January 8-12, 2022.
Mapping blast resistance genes in rice varieties ‘Minghui 63’ and ‘M-202’ Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Jia, M.H., Yan, Z. 2022. Mapping blast resistance genes in rice varieties ‘Minghui 63’ and ‘M-202’. Plant Disease. https://doi.org/10.1094/PDIS-09-21-2095-RE.
Deciphering the role of ATP2-Binding Cassette (ABC) transporter candidate genes in rice sheath blight resistance - (Proceedings)
Singh, P., Oh, Y., Lee, S., Rioux, R., Jia, M.H., Jia, Y., Mysore, K.S. 2021. Deciphering the role of ATP2-Binding Cassette (ABC) transporter candidate genes in rice sheath blight resistance. Abstract. Australasian Plant Pathlogy Society Virtual Workshop, November 3-6, 2021.
An allelic variant of the broad-spectrum blast resistance gene Ptr in weedy rice is associated with resistance to the most virulent blast race IB-33 Reprint Icon - (Peer Reviewed Journal)
Zhao, H., Liu, Y., Jia, M.H., Jia, Y. 2022. An allelic variant of the broad-spectrum blast resistance gene Ptr in weedy rice is associated with resistance to the most virulent blast race IB-33. Plant Disease. https://doi.org/10.1094/PDIS-09-21-2043-RE.
Analysis of differentially expressed rice genes reveals the ATP-Binding Cassette (ABC) transporters as a candidate gene against the sheath blight pathogen, rhizoctonia solani Reprint Icon - (Peer Reviewed Journal)
Oh, Y., Lee, S., Rioux, R., Singh, P., Jia, M.H., Jia, Y., Mysore, K.S. 2022. Analysis of differentially expressed rice genes reveals the ATP-Binding Cassette (ABC) transporters as a candidate gene against the sheath blight pathogen, rhizoctonia solani. Rice. https://doi.org/10.1094/PHYTOFR-05-21-0035-R.
Mapping rice genes involved in blast resistance, chalkiness and yield related component - (Abstract Only)
Jia, Y., Box, H.N., Jia, M.H., Sites, A., Herring, N., Zongbu, Y. 2021. Mapping rice genes involved in blast resistance, chalkiness and yield related component. Abstract. American Phytopathological Society Virtual Meeting, August 2-6, 2021.
Registration of two rice mapping populations using weedy rice ecotypes as a novel germplasm resource Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Singh, V., Gealy, D.R., Liu, Y., Ma, J., Thurber, C.S., Roma-Burgos, N., Olsen, K.M., Caicedo, A.L. 2021. Registration of two rice mapping populations using weedy rice ecotypes as a novel germplasm resource. Journal of Plant Registrations. https://doi.org/10.1002/plr2.20174.
Physiological, ecological and genetic interactions of rice with harmful microbes Reprint Icon - (Book / Chapter)
Jia, Y., Jia, M.H. 2021. Physiological, ecological and genetic interactions of rice with harmful microbes. IntechOpen. https://doi.org/10.5772/intechopen.97159.
Transgenic rice expressing isoflavone synthase gene from soybean shows resistance against blast fungus (Magnaporthe oryzae) Reprint Icon - (Peer Reviewed Journal)
Pokhrel, S., Ponniah, S.K., Jia, Y., Yu, O., Manoharan, M. 2021. Transgenic rice expressing isoflavone synthase gene from soybean shows resistance against blast fungus (Magnaporthe oryzae). Plant Disease. https://doi.org/10.1094/PDIS-08-20-1777-RE.
Bacillus subtilis GB519 promotes rice growth and reduces the damages caused by rice blast fungus magnaporthe oryzae Reprint Icon - (Peer Reviewed Journal)
Zhu, F., Wang, J., Jia, Y., Tian, C., Zhao, D., Wu, X., Liu, Y., Jiang, Z., Liu, X., Li, L., Ren, J., Sun, H., Dong, Y. 2021. Bacillus subtilis GB519 promotes rice growth and reduces the damages caused by rice blast fungus magnaporthe oryzae. Phytofrontiers. https://doi.org/10.1094/PHYTOFR-12-20-0041-R.
Identification and characterization of rice blast resistance genes in Minghui 63- a restorer line widely used in hybrid rice production - (Proceedings)
Jia, Y., Box, H.N., Jia, M.H., Sites Jr, D.A., Herring, N.D., Yan, Z., Bianco, T.A. 2021. Identification and characterization of rice blast resistance genes in Minghui 63- a restorer line widely used in hybrid rice production. Proceedings of 38th Rice Technical Working Group Meeting, February 24-27, 2020, Orange Beach, Alabama. p 101. Electronic Publication.
Toward understanding of rice innate immunity to rice blast fungus - (Proceedings)
Jia, Y., Wang, X., Wamishe, Y., Valent, B. 2021. Toward understanding of rice innate immunity to rice blast fungus. Proceedings of 38th Rice Technical Working Group Meeting, February 24-27, 2020, Orange Beach, Alabama. p 114. Electronic Publication.
Temperature impacts on the effectiveness of the rice blast resistance gene Ptr - (Abstract Only)
Jia, Y., Box, H.N., Wang, X., Zhao, H., Wang, G. 2020. Temperature impacts on the effectiveness of the rice blast resistance gene Ptr. National American Phytopathology Meeting, August 8-12, 2020, Denver, Colorado. Available: https://apsnet.confex.com/apsnet/2020/meetingapp.cgi/Paper/17485
Structural and functional characterization of an atypical rice blast resistance gene Ptr - (Abstract Only)
Jia, Y., Zhao, H., Want, X., Jia, M.H., Liu, Y., Box, H.N. 2020. Structural and functional characterization of an atypical rice blast resistance gene Ptr. American Phytopathological Society Annual Meeting.
Identification of novel QTLs conferring sheath blight resistance in two weedy rice mapping populations Reprint Icon - (Peer Reviewed Journal)
Goad, D.M., Jia, Y., Gibbons, A., Liu, Y., Gealy, D.R., Calcedo, A.L., Olsen, K.M. 2020. Identification of novel QTLs conferring sheath blight resistance in two weedy rice mapping populations. Rice. https://doi.org/10.1186/s12284-020-00381-9.
Characterization of rice blast resistance gene Pi-z (t) in rice germplasm using DNA markers and Pathogenicity assays - (Abstract Only)
Roy-Chowdhury, M., Jia, Y., Jackson, A.K., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2010. Characterization of rice blast resistance gene Pi-z (t) in rice germplasm using DNA markers and Pathogenicity assays. In: 87th Meeting of the Southern Division of the American Phytopathological Society, Orlando, FL, February 7-8-2010.
Over expression of the candidate Pi-ta2 gene in rice (Oryza sativa L. japonica cv. Katy) for resistance against Blast Fungus (Magnaporthe oryzae) - (Abstract Only)
Chhetri, G., Ponniah, S., Jia, Y., Manoharan, M., Valent, B. 2020. Over expression of the candidate Pi-ta2 gene in rice (Oryza sativa L. japonica cv. Katy) for resistance against Blast Fungus (Magnaporthe oryzae) [abstract]. Plant and Animal Genome Conference, San Diego, California, January 11-15, 2020.
Co-evolutionary mechanisms of Oryza sativa and Magnaporthe oryzae pathosystem - (Abstract Only)
Jia, Y., Wang, X., Jia, M.H., Wamishe, Y., Valent, B. 2020. Co-evolutionary mechanisms of Oryza sativa and Magnaporthe oryzae pathosystem [abstract]. Plant and Animal Genome Conference, San Diego, California, January 11-15, 2020.
Identification of critical amino acid residues in Ptr mediated plant innate immunity - (Abstract Only)
Jia, Y., Zhai, H., Jia, M.H., Liu, Y. 2020. Identification of critical amino acid residues in Ptr mediated plant innate immunity [abstract]. Plant and Animal Genome Conference, San Diego, California, January 11-15, 2020.
A new haplotype of rice blast resistance gene Ptr in weedy rice confers resistance to the most virulent race of M. oryzae - (Proceedings)
Zhao, H., Jia, Y., Liu, Y. 2021. A new haplotype of rice blast resistance gene Ptr in weedy rice confers resistance to the most virulent race of M. oryzae. Proceedings of 38th Rice Technical Working Group Meeting, February 24-27, 2020, Orange Beach, Alabama. p 78. Electronic Publication.
A rapid survey of avirulence genes in field isolates of Magnaporthe oryzae Reprint Icon - (Peer Reviewed Journal)
Zhang, Z., Jia, Y., Wang, Y., Sun, G. 2020. A rapid survey of avirulence genes in field isolates of Magnaporthe oryzae. Plant Disease. https://doi.org/10.1094/PDIS-08-19-1688-RE.
Development and characterization of a large mutant population of a rice variety Katy for functional genomics studies and breeding Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Wang, Z., Jia, M.H., Rutger, J.N., Moldenhauer, K. 2019. Development and characterization of a large mutant population of a rice variety Katy for functional genomics studies and breeding. Crop Breeding, Genetics and Genomics. https://doi.org/10.20900/cbgg20190014.
Elucidating the molecular mechanism of the Ptr-mediated rice blast resistance - (Abstract Only)
Yin, W., Jia, Y., Yang, Y. 2019. Elucidating the molecular mechanism of the Ptr-mediated rice blast resistance [abstract]. American Phytopathological Society Abstracts, Cleveland, Ohio, August 307, 2019.
Uniform Regional Rice Nursery (URRN) and Arkansas Rice Performance Test (ARPT) field evaluation for bacterial panicle blight disease of rice in Arkansas - (Experiment Station)
Wamishe, Y., Mulaw, T., Jia, Y., Gebremarlam, T., Sha, X. 2019. Uniform Regional Rice Nursery (URRN) and Arkansas Rice Performance Test (ARPT) field evaluation for bacterial panicle blight disease of rice in Arkansas. B. R. Wells Rice Research Studies. Research Series. pp 119-127.
Structural and functional analysis of the broad spectrum rice blast resistance gene Ptr in US rice germplasm - (Proceedings)
Introductory chapter: Protecting rice grains in the post-genomic era- are we there yet? Reprint Icon - (Book / Chapter)
Jia, Y. 2019. Introductory chapter: Protecting rice grains in the post-genomic era- are we there yet? Book Chapter. https://doi.org/10.5772/intechopen.86390.
A toolbox for managing blast and sheath blight diseases of rice in the United States of America Reprint Icon - (Book / Chapter)
Jia, Y., Jia, M.H., Want, X., Zhao, H. 2019. A toolbox for managing blast and sheath blight diseases of rice in the United States of America. Book Chapter. https://doi.org/10.5772/intechopen.86901.
Integration analysis of small RNA and degradome sequencing reveals microRNAs responsive to Dickeya zeae in resistant rice Reprint Icon - (Peer Reviewed Journal)
Li, W., Jia, Y., Fei, Y., Wang, F., Fan, F., Wang, J., Zhu, J., Zhong, W., Yang, J. 2019. Integration analysis of small RNA and degradome sequencing reveals microRNAs responsive to Dickeya zeae in resistant rice. International Journal of Molecular Sciences. 20(1):222. https://doi.org/10.3390/ijms20010222.
Functional characterization of a new class of rice blast resistance gene Ptr - (Abstract Only)
Jia, Y., Zhao, H., Wang, X., Minkenberg, B., Wheatley, M., Fan, J., Jia, M.H., Famoso, A., Edwards, J., Wamishe, Y., Valent, B., Want, G., Yang, Y. 2019. Functional characterization of a new class of rice blast resistance gene Ptr. Plant and Animal Genome Conference.
Exploring natural variation for rice sheath blight resistance in Brachypodium distachyon Reprint Icon - (Peer Reviewed Journal)
Gill, U.S., Lee, S., Jia, Y., Mysore, K.S. 2018. Exploring natural variation for rice sheath blight resistance in Brachypodium distachyon. Plant Signaling and Behavior. https://doi.org/10.1080/15592324.2018.1546527.
The role of standing variation in the evolution of weediness traits in south Asian weedy rice (oryza spp.) Reprint Icon - (Peer Reviewed Journal)
Huang, Z., Kelly, S., Matsuo, R., Li, L., Li, Y., Olsen, K.M., Jia, Y., Caicedo, A.L. 2018. The role of standing variation in the evolution of weediness traits in south Asian weedy rice (oryza spp.). G3, Genes/Genomes/Genetics. https://doi.org/10.1534/g3.118.200605.
Genome-wide identifcation and characterization of long non-coding RNAs responsive to Dickeya zeae in rice Reprint Icon - (Peer Reviewed Journal)
Li, W., Jia, Y., Wang, F., Fei, Y., Fan, F., Wang, J., Zhu, J., Xu, Y., Zhong, W., Yang, J. 2018. Genome-wide identifcation and characterization of long non-coding RNAs responsive to Dickeya zeae in rice. RSC Advances. https://doi.org/10.1039/c8ra04993a.
Weedy red rice has novel resistance resources to biotic stress Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Gealy, D.R. 2018. Weedy red rice has novel resistance resources to biotic stress. The Crop Journal. https://doi.org/10.1016/j.cj.2018.07.001.
Evaluation of Rice Responses to Blast Fungus Magnaporthe oryzae at Different Growth Stages Reprint Icon - (Peer Reviewed Journal)
Chen, X., Jia, Y., Wu, B. 2018. Evaluation of Rice Responses to Blast Fungus Magnaporthe oryzae at Different Growth Stages. Plant Disease. https://doi.org/10.1094/PDIS-12-17-1873-RE.
Selection and Mutation of the Avirulence Gene AVR-Pii of the Rice Blast Fungus Magnaporthe Oryzae Reprint Icon - (Peer Reviewed Journal)
Lu, L., Li, C., Fan, H., Jia, Y., Li, J. 2018. Selection and mutation of the avirulence Gene AVR-Pii of the rice blast fungus magnaporthe oryzae. Plant Pathology. https://doi: 10.1111/ppa.12935.
Surprises learned from plant immunity-challenges and opportunities for crop protection - (Abstract Only)
Jia, Y., Zhao, H., Wang, X. 2018. Surprises learned from plant immunity-challenges and opportunities for crop protection. American Phytopathological Society Annual Meeting, Boston, Massachusetts, July 29 - August 3, 2018.
Field Germplasm Evaluation, and Development of Diagnostic Methods for Bacterial Panicle Blight Disease of Rice in Arkansas - (Experiment Station)
Wamishe, Y., Mulaw, T., Rojas, C., Jia, Y., Gebremariam, T.A. 2018. Field Germplasm Evaluation, and Development of Diagnostic Methods for Bacterial Panicle Blight Disease of Rice in Arkansas. B. R. Wells Rice Research Studies.
The rice blast resistance gene Ptr encodes an atypical protein required for broad spectrum disease resistance Reprint Icon - (Peer Reviewed Journal)
Zhao, H., Wang, X., Jia, Y., Minkenberg, B., Wheatley, M., Fan, J., Jia, M.H., Famoso, A., Edwards, J., Wamishe, Y., Valent, B., Wang, G., Yang, Y. 2018. The rice blast resistance gene Ptr encodes an atypical protein required for broad spectrum disease resistance. Nature Communications. https://doi.org:10.1038/s41467-018-04369-4.
Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs Reprint Icon - (Peer Reviewed Journal)
Chen, X., Jia, Y., Jia, M.H., Pinson, S.R., Wang, X., Wu, B. 2018. Functional interactions of major rice blast resistance genes Pi-ta with Pi-b and minor blast resistance QTLs. Phytopathology. https://doi.org/10.1094/PHYTO-02-18-0032-R.
Development of selectable marker-free cisgenic rice plants expressing a blast resistance gene Pi9 - (Abstract Only)
Tamang, T., Park, J., Kakeshpour, T., Valent, B., Jia, Y., Want, G., Park, S. 2018. Development of selectable marker-free cisgenic rice plants expressing a blast resistance gene Pi9. World Congress on In Vitro Biology. Volume 54. Page 544.
Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’ Reprint Icon - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Jia, M.H., Gibbons, J.W. 2018. Novel QTLs affecting rice kernel fissure resistance discovered in the cultivar ‘Saber’ augment those from ‘Cybonnet’. Crop Science. https://doi.org:10.2135/cropsci2017.10.0593.
Dissecting interactions of rice major and minor blast resistance genes with yield related components - (Abstract Only)
Jia, Y., Chen, X., Li, W., Wang, X., Bianco, T.A., Box, H.N. 2018. Dissecting interactions of rice major and minor blast resistance genes with yield related components. International Congress of Plant Pathology Abstracts and Proceedings. Boston, Massachusetts, July 29-August 3, 2018.
Characterization and in plant detection of bacteria that cause bacterial panicle blight disease of rice Reprint Icon - (Peer Reviewed Journal)
Mulaw, T., Wamishe, Y., Jia, Y. 2018. Characterization and in plant detection of bacteria that cause bacterial panicle blight disease of rice. American Journal of Plant Sciences. https://doi.org:10.4236/ajps.2018.94053.
Dynamic changes of rice blast fungus in the USA through six decades - (Proceedings)
Jia, Y., Wang, X., Bianco, T.A., Jia, M.H., Wamishe, Y., Valent, B. 2018. Dynamic changes of rice blast fungus in the USA through six decades. Proceedings of 37th Rice Technical Working Group Meeting, February 19-22, 2018, Long Beach, California. p 91. Electronic Publication.
Are we there yet for rice disease control - (Proceedings)
Jia, Y. 2018. Are we there yet for rice disease control. Proceedings of 37th Rice Technical Working Group Meeting, February 19-22, 2018, Long Beach, California. p 91. Electronic Publication.
Genetic analysis of rice blast disease resistance genes using USDA rice mini-core and a mapping population - (Proceedings)
Li, W., Jia, Y., Yang, J. 2018. Genetic analysis of rice blast disease resistance genes using USDA rice mini-core and a mapping population. Proceedings of 37th Rice Technical Working Group Meeting, February 19-22, 2018, Long Beach, California. p 87. Electronic Publication.
CRISPR/Cas9-Mediated Gene Editing in Rice (Oryza sativa L. japonica cv. Katy) for Stable Resistance against Blast Fungus (Magnaporthe oryzae) - (Abstract Only)
Bhatta, B.P., Ponniah, S.K., Jia, Y., Muthusamy, M. 2018. CRISPR/Cas9-Mediated Gene Editing in Rice (Oryza sativa L. japonica cv. Katy) for Stable Resistance against Blast Fungus (Magnaporthe oryzae). Plant and Animal Genome, San Diego, California, January 13-17, 2018.
Call of the wild rice: Oryza rufipogon shapes weedy rice evolution in Southeast Asia Reprint Icon - (Peer Reviewed Journal)
Vigueira, C.C., Qi, X., Song, B., Li, L., Caicedo, A.L., Jia, Y., Olsen, K.M. 2017. Call of the wild rice: Oryza rufipogon shapes weedy rice evolution in Southeast Asia. Evolutionary Applications. https://doi.org:10.1111/eva.12581.
Germplasm Evaluation for Resistance and Monitoring Bacterial Panicle Blight Disease of Rice in Arkansas, 2016 - (Experiment Station)
Wamishe, Y., Mulaw, T., Jia, Y., Gebremariam, T., Belmar, S., Kelse, C. 2017. Germplasm Evaluation for Resistance and Monitoring Bacterial Panicle Blight Disease of Rice in Arkansas, 2016. B. R. Wells Rice Research Studies. series 643: 121-127.
Dynamic changes in the rice blast population in the USA over six decades Reprint Icon - (Peer Reviewed Journal)
Wang, X., Jia, Y., Wamishe, Y., Jia, M.H., Valent, B. 2017. Dynamic changes in the rice blast population in the USA over six decades. Molecular Plant-Microbe Interactions. https://doi:10.1094/MPMI-04-17-0101-R.
All roads lead to weediness: patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza - (Peer Reviewed Journal)
Huang, Z., Young, N.D., Hyma, K., Olsen, K.M., Jia, Y., Caicedo, A.L. 2017. All roads lead to weediness: patterns of genomic divergence reveal extensive recurrent weedy rice origins from South Asian Oryza. Molecular Ecology. doi:10.1111/mec.14120.
Signatures of adaptation in the weedy rice genome - (Peer Reviewed Journal)
Li, L., Li, Y., Jia, Y., Caicedo, A.L., Olsen, K.M. 2017. Signatures of adaptation in the weedy rice genome. Nature Genetics. doi:10.1038/ng.3825.
Characterization of molecular identity and pathogenicity of rice blast fungus in Hunan province of China - (Peer Reviewed Journal)
Xing, J., Jia, Y., Peng, Z., He, Q., Shu, F., Zhang, W., Sun, P., Deng, H., Zhang, Z. 2016. Characterization of molecular identity and pathogenicity of rice blast fungus in Hunan province of China. Plant Disease. doi:10.1094.
Little white lies: pericarp color provides insights into the origins and evolution of Southeast Asian weedy rice - (Peer Reviewed Journal)
Cui, Y., Song, B., Li, L., Li, Y., Huang, Z., Caicedo, A.L., Jia, Y., Olsen, K.M. 2016. Little white lies: pericarp color provides insights into the origins and evolution of Southeast Asian weedy rice. G3, Genes/Genomes/Genetics. doi:10.1534/g3.116.035881.
Analysis of rice blast resistance genes from domesticated and weedy species of rice - (Abstract Only)
Jia, Y., Wang, X., Liu, Y., Scheuemann, K., Xing, J., Wang, J., Gealy, D.R., Olsen, K., Caicedo, A. 2016. Analysis of rice blast resistance genes from domesticated and weedy species of rice. Meeting Abstract. 7th IRBC, p81.
Identification of broad spectrum rice blast resistance genes with IRRI Rice monogenic lines - (Abstract Only)
Wang, J., Kim, D., Wu, X., Ren, J., Liu, X., Jia, Y., Gao, Z. 2016. Identification of broad spectrum rice blast resistance genes with IRRI Rice monogenic lines. Meeting Abstract. 7th IRBC, p81.
Registration of 42 blast resistant medium grain rice genetic stocks with suitable agronomic, yield, milling yield, and grain characteristics - (Peer Reviewed Journal)
Jia, Y., Berger, G., Mcclung, A.M. 2016. Registration of 42 blast resistant medium grain rice genetic stocks with suitable agronomic, yield, milling yield, and grain characteristics. Journal of Plant Registrations. doi:10.3198/jpr2016.03.0015crgs.
Monitoring bacterial panicle blight disease of rice and germplasm evaluation for resistance in Arkansas in 2015 - (Other)
Wamishe, Y., Mulaw, T., Jia, Y., Gebremariam, T.A., Belmar, S.B., Kelsey, C.D. 2016. Monitoring bacterial panicle blight disease of rice and germplasm evaluation for resistance in Arkansas in 2015. B. R. Wells Rice Research Studies. Vol 634, pp120-125.
Development of controlled high throughput and user friendly assays for host responses to rice pathogen isolates - (Abstract Only)
Jia, Y. 2016. Development of controlled high throughput and user friendly assays for host responses to rice pathogen isolates. American Phytopathological Society Annual Meeting. 2016 APS annual meeting, 108S.
Molecular screening of Magnaporthe Oryzae avirulence genes - (Proceedings)
Unan, R., Jia, Y. 2016. Molecular screening of Magnaporthe Oryzae avirulence genes. Fungal Genetics Conference Proceedings. Paris, France, April 3-6, 2016.
Coevolutionary dynamics of rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita 1 Reprint Icon - (Peer Reviewed Journal)
Jia, Y., Zhou, E., Lee, S., Bianco, T.A. 2016. Coevolutionary dynamics of rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita 1. Phytopathology. 106(7):676-683. doi: org/10.1094/PHYTO-02-16-0057-RVW.
Identification of a Pi9 containing rice germplasm with a newly developed robust marker - (Peer Reviewed Journal)
Scheuermann, K.K., Jia, Y. 2016. Identification of a Pi9 containing rice germplasm with a newly developed robust marker. Phytopathology. Phytopathology 106:871-876.
Survey of rice blast race identity for blast resistance gene identification in the USA and Puerto Rico - (Proceedings)
Jia, Y., Lin, M.J. 2017. Survey of rice blast race identity for blast resistance gene identification in the USA and Puerto Rico. Proc. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX, p. 89. March 1-4, 2016. CDROM.
Identification of sheath blight resistant rice varieties from the USDA rice core collection - (Proceedings)
Jia, Y., Gibbons, A., Sookaserm, T.B. 2016. Identification of sheath blight resistant rice varieties from the USDA rice core collection. Proc. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX. pg. 67. March 1-4, 2016. CDROM.
Development of a user friendly method to produce massive amounts of Rhizoctonia Solani for field evaluation of sheath blight resistance. - (Proceedings)
Gibbons, A., Jia, Y., Bianco, T.A. 2017. Development of a user friendly method to produce massive amounts of Rhizoctonia Solani for field evaluation of sheath blight resistance. Proc. 36th Rice Technical Working Group Meeting, Galveston, TX. pg 98. March 1-4, 2016. CDROM..
Rice fissure resistance QTLs from ‘Saber’ complement those from ‘Cypress’ - (Proceedings)
Pinson, S.R.M., Jia, Y., Gibbons, J. 2017. Rice fissure resistance QTLs from ‘Saber’ complement those from ‘Cypress’. Rice Technical Working Group Meeting Proceedings. , p. 171-172. March 1-4, 2016. CDROM.
Field evaluation of potential weed-suppressive traits in an indica x tropical japonica mapping population - (Proceedings)
Gealy, D.R., Pinson, S.R., Jia, Y., Zhang, F. 2017. Field evaluation of potential weed-suppressive traits in an indica x tropical japonica mapping population. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX. p. 106. March 1-4, 2016. CDROM.
Survey and identification of panicle blanking bacteria in Arkansas - (Proceedings)
Mulaw, T., Wamishe, Y., Jia, Y., Gebremariam, T.A., Belmar, S.B., Kelsey, C.D. 2017. Survey and identification of panicle blanking bacteria in Arkansas. Proc. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX. pg. 91-92. March 1-4, 2016. CDROM.
First report of multiple races of the rice blast fungus Magnaporthe oryzae in Puerto Rico - (Peer Reviewed Journal)
Jia, Y., McClung, A.M. 2016. First report of multiple races of the rice blast fungus Magnaporthe oryzae in Puerto Rico. Plant Disease. doi: 10.1094/PDIS-12-15-1391-PDN.
Association mapping of rice cold germination with the USDA mini-core - (Proceedings)
Zhao, H., McClung, A.M., Wang, X., Jia, Y. 2017. Association mapping of rice cold germination with the USDA mini-core. Proc. 36th Rice Technical Working Group Meeting, Galveston, TX, p. 75-76. March 1-4, 2016. CDROM.
Analysis of rice blast avirulence genes in field blast isolates in the southern USA from 1950-2015 - (Proceedings)
Wang, X., Bianco, T.A., Wamishe, Y., Valent, B., Jia, Y. 2017. Analysis of rice blast avirulence genes in field blast isolates in the southern USA from 1950-2015. Proc. 36th Rice Technical Working Group Meeting Proceedings, Galveston, TX. pg. 100. March 1-4, 2016. CDROM.
The race shift of Magnaporthe oryzae occurred within 50 years in the U.S.A. - (Proceedings)
Wang, X., Lin, M.J., Bianco, T.A., Wamishe, Y., Valent, B., Jia, Y. 2017. The race shift of Magnaporthe oryzae occurred within 50 years in the U.S.A.. Proc. 36th Rice Technical Working Group Meeting, Galveston, TX. pg. 68. March 1-4, 2016. CDROM.
Marker development for rice blast resistance gene Pi66(t) and application in USDA rice mini-core collection Reprint Icon - (Peer Reviewed Journal)
Liu, Y., Jia, Y., Gealy, D.R., Goad, D.M., Caicedo, A.L., Olsen, K.M. 2016. Marker development for rice blast resistance gene Pi66(t) and application in USDA rice mini-core collection. Plant Science. 56:1-8. doi: 10.2135/cropsci2015.07.0422.
QTLs for early tiller production and relationships with rapid seedling growth and increased panicle number in rice - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y. 2016. QTLs for early tiller production and relationships with rapid seedling growth and increased panicle number in rice. Crop Science. 56:505-519. doi: 10.2135/cropsci2014.09.0667.
Characterization of field isolates of Magnaporthe oryzae with mating type, DNA fingerprinting, and pathogenicity assays Reprint Icon - (Peer Reviewed Journal)
Li, J., Li, L., Jia, Y., Wang, Q., Fukuta, Y., Li, C. 2016. Characterization of field isolates of Magnaporthe oryzae with mating type, DNA fingerprinting, and pathogenicity assays. Plant Disease. 100(2):298-303. doi.org/10.1094/PDIS-06-15-0660-RE.
Genome-wide association of rice blast disease resistance and yield-related components of rice - (Peer Reviewed Journal)
Wang, X., Jia, M.H., Ghai, P., Lee, F.N., Jia, Y. 2015. Genome-wide association of rice blast disease resistance and yield-related components of rice. Molecular Plant-Microbe Interactions. 28(12):1383-1392. doi.org/10.1094/MPMI-06-15-0131-R.
Confirming and identifying new loci for rice blast disease resistance using magnaporthe oryzae field isolates in the US - (Peer Reviewed Journal)
Xing, J., Jia, M.H., Correll, J.C., Yuan, L., Deng, H., Jia, Y. 2015. Confirming and identifying new loci for rice blast disease resistance using magnaporthe oryzae field isolates in the US. Crop Science. 55:2620-2627. doi: 10.2135/cropsci2015.02.0077.
More than one way to evolve a weed: parallel evolution of U.S. weedy rice through independent genetic mechanisms - (Peer Reviewed Journal)
Qi, X., Liu, Y., Vigueira, C., Young, N., Caicedo, A.L., Jia, Y., Gealy, D.R., Olsen, K.M. 2015. More than one way to evolve a weed: parallel evolution of U.S. weedy rice through independent genetic mechanisms. Molecular Ecology. 24:3329–3344. DOI: 10.1111/mec.13256.
Quick survey of avirulence genes in field isolates of Magnaporthe oryzae in the past 60 years - (Abstract Only)
Wang, X., Bianco, T.A., Lin, M.J., Wamishe, Y., Jia, Y. 2015. Quick survey of avirulence genes in field isolates of Magnaporthe oryzae in the past 60 years. APS annual meeting, Pasadena, California, August 1-5, 2015. American Phytopathological Society. p. 312.
Development of molecular markers for breeding for disease resistant crops - (Proceedings)
Jia, Y., Liu, Y., Wang, X., Scheuermann, K., Jia, M.H., Mcclung, A.M. 2015. Development of molecular markers for breeding for disease resistant crops. Permanent identification: urn:nbn:de:0294-sp-2015-1-2. Proceedings of XVIII International Plant Protection Congress. August 24-28, 2015. Berlin, Germany. OBT3, Page 88.
Characterization of rice blast resistance genes in rice germplasm with monogenic lines and pathogenicity assays - (Peer Reviewed Journal)
Wang, J., Correll, J.C., Jia, Y. 2015. Characterization of rice blast resistance genes in rice germplasm with monogenic lines and pathogenicity assays. Crop Protection. 72:132-138.
QTLs analysis for resistance to blast disease in US weedy rice Reprint Icon - (Peer Reviewed Journal)
Liu, Y., Qi, X., Gealy, D.R., Olsen, K.M., Caicedo, A.L., Jia, Y. 2015. QTLs analysis for resistance to blast disease in US weedy rice. Molecular Plant-Microbe Interactions. p. 1-36. doi.org/10.1094/MPMI-12-14-0386-R.
Growth characteristics of a weed-suppressive indica x non-suppressive tropical japonica rice mapping population - (Abstract Only)
Gealy, D.R., Jia, Y., Pinson, S.R. 2015. Growth characteristics of a weed-suppressive indica x non-suppressive tropical japonica rice mapping population. Weed Science Society of America Meeting Abstracts. 55(263). Available: http://wssaabstracts.com/public/30/proceedings.html
Characterization of resistance genes to rice blast fungus Magnaporthe oryzae in a “Green Revolution” rice variety - (Peer Reviewed Journal)
Liu, Y., Qi, X., Young, N.D., Olsen, K.M., Caicedo, A.L., Jia, Y. 2015. Characterization of resistance genes to rice blast fungus magnaporthe oryzae in a “Green Revolution” rice variety. Molecular Breeding. 35:52. DOI 10.1007/s11032-015-0256-y.
Statistical inference of selection and divergence of rice blast resistance gene Pi-ta - (Peer Reviewed Journal)
Amei, A., Lee, S., Mysore, K.S., Jia, Y. 2014. Statistical inference of selection and divergence of rice blast resistance gene Pi-ta. Genes, Genomes, Genetics. 4:2425-2432.
Purification, storage, and pathogenicity assay of rice false smut fungus under controlled environmental conditions - (Abstract Only)
Jia, Y., El-Shafey, R., Zhang, Z. 2014. Purification, storage, and pathogenicity assay of rice false smut fungus under controlled environmental conditions. American Phytopathological Society Annual Meeting. Published on-line. p 53.
Insights into molecular mechanism of blast resistance in weedy rice - (Abstract Only)
Liu, Y., Jia, Y., Qi, X., Olsen, K.M., Caicedo, A.L., Gealy, D.R. 2014. Insights into molecular mechanism of blast resistance in weedy rice. Proc. APS-CPS Joint Meet., Minneapolis, MN, pp.67-70. August 9-13, 2014.
Identification of major blast resistance genes in the southern US - (Abstract Only)
Wang, X., Wamishe, Y., Bianco, T.A., Lin, M.J., Valent, B., Jia, Y. 2014. Identification of major blast resistance genes in the southern US. American Phytopathological Society Annual Meeting, August 9-13, 2014, Minneapolis, MN. O68.
Characterizing virulence phenotypes among U.S. isolates of Magnaporthe oryzae using IRRI NILs, US germplasm, and NERICA lines - (Abstract Only)
Rotich, F., Feng, C., Jia, Y., Groth, D., Correll, J. 2014. Characterizing virulence phenotypes among U.S. isolates of Magnaporthe oryzae using IRRI NILs, US germplasm, and NERICA lines. In BR Wells Studies- series 609 2013. Edited by Norman, RJ., Molderhauer, KAK, University of Arkansas. Pages 109-115.
Sequence variation and recognition specificity of the avirulence gene AvrPiz-t in Magnaporthe oryzae field populations Reprint Icon - (Peer Reviewed Journal)
Chen, C., Chen, M., Hu, J., Zhang, W., Zhong, Z., Jia, Y., Allaux, L., Fournier, E., Tharreau, D., Wang, G., Wang, Z., Shen, W., Lu, G., Wang, B., Mitchell, T.K. 2014. Sequence variation and recognition specificity of the avirulence gene AvrPiz-t in Magnaporthe oryzae field populations. Fungal Genomics and Biology. 4:113. doi:10.4172/2165-8056.1000113.
Registration of a rice gene mapping population of Lemont X Jasmine 85 recombinant inbred lines - (Peer Reviewed Journal)
Jia, Y., Liu, G., Jia, M.H., McClung, A.M. 2014. Registration of a rice gene mapping population of Lemont X Jasmine 85 recombinant inbred lines. Journal of Plant Registrations. 9:128-132.
The evolution of flowering strategies in US weedy rice Reprint Icon - (Peer Reviewed Journal)
Thurber, C.S., Reagon, M., Olsen, K.M., Jia, Y., Caicedo, A.L. 2014. The evolution of flowering strategies in US weedy rice. American Journal of Botany. 101(10):1737-1747. doi:10.3732/ajb.1400154.
An expedited method to isolate DNA for PCR from Magnaporthe oryzae stored on filter paper - (Peer Reviewed Journal)
Jia, Y., Wamishe, Y.A., Zhou, B. 2014. An expedited method to isolate DNA for PCR from Magnaporthe oryzae stored on filter paper. The Crop Journal. 2(5):267-271.
Molecular detection of Xanthomonas oryzae pv. oryzae, Xanthomonas oryzae pv. oryzicola, and Burkholderia glumae in infected rice seeds and leaves Reprint Icon - (Peer Reviewed Journal)
Lu, W., Pan, L., Zhao, H., Jia, Y., Wang, Y., Yu, X., Wang, X. 2014. Molecular detection of Xanthomonas oryzae pv. oryzae, Xanthomonas oryzae pv. oryzicola, and Burkholderia glumae in infected rice seeds and leaves. The Crop Journal. 2:398-406. doi: 10.1016/j.cj.2014.06.005.
Development of practical diagnostic methods for monitoring rice bacterial panicle blight disease and evaluation of rice germplasm for resistance - (Experiment Station)
Wamishe, Y., Jia, Y., Kelsey, S., Belmar, S., Rasheed, M.D. 2014. Development of practical diagnostic methods for monitoring rice bacterial panicle blight disease and evaluation of rice germplasm for resistance. Arkansas Agricultural Experiment Station, B.R. Wells Rice Research Studies-20012, eds. Norman, R.J., and Moldenhauer, K., series 609:103-108. (http://arkansasagnews.uark.edu/609-13.pdf).
Natural variation of rice blast resistance gene Pi-d2 - (Peer Reviewed Journal)
Li, J., Sun, Y., Liu, H., Wang, Y., Jia, Y., Xu, M. 2015. Natural variation of rice blast resistance gene Pi-d2. Genetics and Molecular Research. 14(1):1235-1249. doi.org/10.4238/2015.February.13.2.
Identification of candidate genes associated with positive and negative heterosis in rice - (Peer Reviewed Journal)
Venu, R.C., Ma, J., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M.V., Moldenhauer, K., McClung, A.M., Meyers, B.C., Wang, G. 2014. Identification of candidate genes associated with positive and negative heterosis in rice. PLoS One. 9(4):e95178.
Exploring optimization of weed suppression, yield, and biotic stress tolerance in an allelopathic X non-allelopathic rice mapping population - (Abstract Only)
Gealy, D.R., Jia, Y., Pinson, S.R. 2014. Exploring optimization of weed suppression, yield, and biotic stress tolerance in an allelopathic X non-allelopathic rice mapping population. In: Proceedings of the 7th World Congress on Allelopathy. Vigo, Spain. International Allelopathy Society. International Allelopathy Congress. p. 224.
Characterization of rice blast resistance gene Pi61(t) in rice germplasm Reprint Icon - (Peer Reviewed Journal)
Ma, J., Jia, M.H., Jia, Y. 2014. Characterization of rice blast resistance gene Pi61(t) in rice germplasm. Plant Disease. 98(9):1200-1204.
Development of a pathology toolbox for genetic and breeding for resistance to rice sheath blight disease - (Proceedings)
Jia, Y. 2014. Development of a pathology toolbox for genetic and breeding for resistance to rice sheath blight disease. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.86. Feb 18-21, 2014. CDROM.
Promises and challenges of genomics for rice pathology - (Proceedings)
Jia, Y., Lin, M.J., Bianco, T.A. 2014. Promises and challenges of genomics for rice pathology. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.94. Feb 18-21, 2014. CDROM.
Identification of candidate genes associated with heterosis in rice - (Proceedings)
Venu, R.C., Ma, J., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M.V., Moldenhauer, K., McClung, A.M., Meyers, B.C., Wang, G. 2014. Identification of candidate genes associated with heterosis in rice. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.53. Feb 18-21, 2014. CDROM.
Identification of genetic loci underlying the kernel fissure-resistance exhibited by 'cypress' and 'saber' - (Proceedings)
1. Pinson, S.R.M., J. Gibbons, and Y. Jia. 2014. Identification of genetic loci underlying the kernel fissure-resistance exhibited by 'Cypress' and 'Saber'. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, pp. 58-59. Feb. 18-21, 2014. CDROM.
Elucidation of molecular dynamics of invasive species of rice - (Proceedings)
Yan, L., Qin, X., Vigueira, C., Jia, M.H., Jia, Y., Gealy, D.R., Olsen, K., Caicedo, A., Burgos, N. 2014. Elucidation of molecular dynamics of invasive species of rice. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.94. Feb 18-21, 2014. CDROM.
Multistate evaluation of Brassica cover crop, biocontrol agent, and fungicide for integrated management of sheath blight - (Proceedings)
Zhou, X., Liu, G., Anders, M.M., Maxwell, H., Allen, T., Kloepper, J.W., Reddy, M.S., Jia, Y., Lu, S., Jo, Y., Way, M. 2014. Multistate evaluation of Brassica cover crop, biocontrol agent, and fungicide for integrated management of sheath blight. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.79. Feb 18-21, 2014. CDROM.
Implication of co-evolutionary dynamics for genetic resistance to rice blast fungus - (Proceedings)
Jia, Y. 2014. Implication of co-evolutionary dynamics for genetic resistance to rice blast fungus. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.39. Feb 18-21, 2014. CDROM.
Disease reactions of IRRI near-isogenic rice lines to U.S. isolates of Magnaporthe oryzae - (Proceedings)
Feng, C., Rotich, F., Jia, Y., Correll, J. 2014. Disease reactions of IRRI near-isogenic rice lines to U.S. isolates of Magnaporthe oryzae. Proc. 35th Rice Tech. Work. Group Meet., New Orleans, LA, p.89. Feb 18-21, 2014. CDROM.
Effectiveness and durability of the rice Pi-ta gene in Yunnan province of China Reprint Icon - (Peer Reviewed Journal)
Li, J., Lu, L., Jia, Y., Li, C. 2014. Effectiveness and durability of the rice Pi-ta gene in Yunnan province of China. Phytopathology. 104(7):762-768.
Tagging quantitative trait loci for heading date and plant height in important breeding parents of rice (Oryza sativa) - (Peer Reviewed Journal)
Lee, S., Jia, M.H., Jia, Y., Liu, G. 2014. Tagging quantitative trait loci for heading date and plant height in important breeding parents of rice (Oryza sativa). Euphytica. 197(2):191-200. DOI 10.1007/s10681-013-1051-7.
Induction of avirulence by AVR-Pita1 in virulent U.S. field isolates of Magnaporthe oryzae - (Peer Reviewed Journal)
Dai, Y., Winston, E., Correll, J.C., Jia, Y. 2014. Induction of avirulence by AVR-Pita1 in virulent U.S. field isolates of Magnaporthe oryzae. The Crop Journal. 2(1):1-9.
Genetic variation and evolution of the Pit blast resistance locus in rice Reprint Icon - (Peer Reviewed Journal)
Li, J., Sun, Y., Liu, H., Wang, Y., Jia, Y., Xu, M. 2013. Genetic variation and evolution of the Pit blast resistance locus in rice. Genetic Resources and Crop Evolution. 61:473-489. DOI 10.1007/s10722-013-0051-8.
Current advances on genetic resistance to rice blast disease - (Book / Chapter)
Wang, X., Lee, S., Wang, J., Ma, J., Bianco, T.A., Jia, Y. 2014. Current advances on genetic resistance to rice blast disease. Book Chapter. pgs. 195-217. DOI: 10.5772/56824. Publisher: In Tech http://www.intechopen.com. Editor: Wengui Yan.
Brassica cover cropping for management of sheath blight of rice - (Abstract Only)
Zhou, X., Liu, G., Handiseni, M., Anders, M.M., Jia, Y. 2013. Brassica cover cropping for management of sheath blight of rice. Rice Field Day Abstract. Beaumont, Texas Rice Field Day 2013. Special Section: 17.
Development and characterization of rice mutants for functional genomic studies and breeding - (Book / Chapter)
Wang, Z., Jia, Y. 2014. Development and characterization of rice mutants for functional genomic studies and breeding. In: Tomlekova, N.B., Kozgar, M.I., Wani, M.R., editors. Mutagenesis: Exploring Novel Genes and Pathways. Wageningen Academic Publishers. p. 307-322.
Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Three QTLs conferring resistance to kernel fissuring in rice (Oryza sativa L.) identified by selective genotyping in two tropical japonica populations. Crop Science. 53:2434-2443.
Global efforts in managing rice blast disease - (Abstract Only)
Jia, Y. 2013. Global efforts in managing rice blast disease. American Phytopathological Society Abstracts. 112-S.
Characterizing virulence phenotypes among U.S. isolates of Pyricularia oryzae using IRRI NILs, U.S. germplasm, and NERICA lines Reprint Icon - (Abstract Only)
Rotich, F., Feng, C., Jia, Y., Correll, J. 2013. Characterizing virulence phenotypes among U.S. isolates of Pyricularia oryzae using IRRI NILs, U.S. germplasm, and NERICA lines. APS Annual Meeting. Aug. 10-14 Austin, TX Abstract #278.
Analysis of rice PDR-like ABC transporter genes in sheath blight resistance - (Abstract Only)
Lee, S., Sing, P., Jia, M.H., Jia, Y. 2013. Analysis of rice PDR-like ABC transporter genes in sheath blight resistance. American Phytopathological Society Abstracts. 50-O.
PGPR and its combined use with fungicide for control of rice sheath blight in the southern U.S - (Abstract Only)
Zhou, X., Liu, G., Anders, M.M., Maxwell, H., Allen, T., Kloepper, J.W., Reddy, M.S., Jia, Y., Lu, S., Jo, Y., Way, M. 2013. PGPR and its combined use with fungicide for control of rice sheath blight in the southern U.S. Rice Field Day Abstract. Beaumont, Texas Rice XIII (Special Section, Highlighting Research):17.
Development of practical diagnostic methods for monitoring rice bacterial panicle blight disease and evaluation of rice germplasm for resistance - (Experiment Station)
Wamishe, Y., Jia, Y., Kelsey, C., Belmar, S., Rasheed, M. 2014. Development of practical diagnostic methods for monitoring rice bacterial panicle blight disease and evaluation of rice germplasm for resistance. In BR Wells Studies- series 609 2013. Edited by Norman, RJ., Molderhauer, KAK, University of Arkansas. Arkansas Agricultural Experiment Station Research Series. Pages 103-108.
Deep transcriptome sequencing reveals the expression of key functional and regulatory genes involved in the abiotic stress signaling pathways in rice - (Peer Reviewed Journal)
Venu, R.A., Sreerekha, M., Nobuta, K., Madhav, S.M., Jia, Y., Meyers, B.C., Wang, G. 2013. Deep transcriptome sequencing reveals the expression of key functional and regulatory genes involved in the abiotic stress signaling pathways in rice. Journal of Plant Biology. 56:216-231.
Evaluation of brassica cover crop and PGPR strain for suppression of sheath blight of rice in Arkansas, 2012 - (Experiment Station)
Anders, M.M., Zhou, X., Jia, Y., Liu, G. 2013. Evaluation of brassica cover crop and PGPR strain for suppression of sheath blight of rice in Arkansas, 2012. Plant Disease Management Reports. 7: FC048 doi:10.1094/PDMR07.
Evolutionary insights into the origins of weediness in U.S. red rice - (Abstract Only)
Gealy, D.R., Liu, Y., Vigueira, C., Jia, Y., Caicedo, A., Burgos, N.R., Olsen, K. 2013. Evolutionary insights into the origins of weediness in U.S. red rice. Weed Science Society of America Meeting Abstracts. 53:96.
Molecular mapping of four blast resistance genes using recombinant inbred lines of 93-11 and nipponbare Reprint Icon - (Peer Reviewed Journal)
Hongmei, Y., Jia, M.H., Jia, Y., Venus, R., Wang, Z., Sun, C., Wang, G. 2013. Molecular mapping of four blast resistance genes using recombinant inbred lines of 93-11 and nipponbare. Journal of Plant Biology. 56:91-97.
PGPR: A novel strategy for the control of rice sheath blight disease - (Abstract Only)
Zhou, X., Kumar, V.K., Reddy, M.S., Kloepper, J.W., Jia, Y., Allen, T.W., Way, M.O. 2013. PGPR: A novel strategy for the control of rice sheath blight disease. Thirty-Fourth Rice Technical Working Group Meeting Proceedings, Hot Springs, AR, February 27-March 1, 2012. Page 81.
Construction of a yeast two hybrid library in a compatible interaction of rice with an AVR-Pita1 containing isolate - (Abstract Only)
Zhang, Z., Jia, Y., Wang, Y., Liu, F., Sun, G. 2013. Construction of a yeast two hybrid library in a compatible interaction of rice with an AVR-Pita1 containing isolate. Thirty-Fourth Rice Technical Working Group, Hot Springs, AR. Page 73.
Identification of rice blast resistance genes using international monogenic differentials - (Peer Reviewed Journal)
Wang, J., Jia, Y., Wen, J., Liu, W., Liu, X., Li, L., Jiang, Z., Zhang, J., Guo, X., Ren, J. 2013. Identification of rice blast resistance genes using international monogenic differentials. Crop Protection. 45:109-116.
Analysis of genetic and molecular identity among field isolates of the rice blast fungus with an international differential system, rep-PCR and DNA sequencing Reprint Icon - (Peer Reviewed Journal)
Xing, J., Jia, Y., Correll, J.C., Lee, F.N., Cartwright, R., Cao, M., Yuan, L. 2013. Analysis of genetic and molecular identity among field isolates of the rice blast fungus with an international differential system, rep-PCR and DNA sequencing. Plant Disease. 97:491-495.
Similar traits, different genes? Examining convergent evolution in related weedy rice populations - (Peer Reviewed Journal)
Thurber, C.S., Jia, M.H., Jia, Y., Caicedo, A. 2013. Similar traits, different genes? Examining convergent evolution in related weedy rice populations. Molecular Ecology. 22:685-698. doi: 10.1111/mec.12147.
Establishment and application of an efficient, economic, and rapid rice DNA extraction method - (Peer Reviewed Journal)
Zhao, G., Jia, Y., Deren, C.W., Yan, Z., Jia, M.H., Dai, L. 2012. Establishment and application of an efficient, economic, and rapid rice DNA extraction method. Chinese Journal of Rice Science. 26(4):495-499.
Confirming QTLs and finding additional loci responsible for resistance to rice sheath blight disease - (Peer Reviewed Journal)
Liu, G., Jia, Y., McClung, A.M., Oard, J., Lee, F., Correll, J. 2013. Confirming QTLs and finding additional loci responsible for resistance to rice sheath blight disease. Plant Disease. 97:113-117.
Indica and Japonica crosses resulting in linkage block and recombination suppression on rice chromosome 12 - (Peer Reviewed Journal)
Jia, Y., Jia, M.H., Wang, Z., Liu, G. 2012. Indica and Japonica crosses resulting in linkage block and recombination suppression on rice chromosome 12. PLoS One. 7(8):Article e43066.
Transcriptome and methylome interactions in rice hybrids - (Peer Reviewed Journal)
Chodavarapu, R.K., Feng, S., Ding, B., Simon, S.A., Lopez, D., Jia, Y., Wang, G., Meyers, B.C., Jacobsen, S.E., Pellegrini, M. 2012. Transcriptome and methylome interactions in rice hybrids. Proceedings of the National Academy of Sciences. 109:30-36.
Pathological and molecular characterization of rice blast pathogenicity factor AVR-Pital in field isolates Reprint Icon - (Experiment Station)
Jia, Y., Correll, J.C., Lee, F.N. 2012. Pathological and molecular characterization of rice blast pathogenicity factor AVR-Pital in field isolates. Arkansas Agricultural Experiment Station Research Series. BR Wells Rice Research Studies 2011 pg. 53-72.
Pathological and Molecular Characterization of Rice Blast Pathogenicity Factor AVR-Pita 1 in Field Isolates - (Experiment Station)
Jia, Y., Correll, J.C., Lee, F.N. 2012. Pathological and Molecular Characterization of Rice Blast Pathogenicity Factor AVR-Pita 1 in Field Isolates. Annual International Plant & Animal Genome Conference. Page 53-72 in b.R. Wells Rice Research Studies 2011.
Natural variation and evolution of the avirulence genes in Magnaporthe oryzae - (Abstract Only)
Jia, Y., Zhang, Z., Xing, J., Wang, J., Correll, J.C., Cartwright, R. 2012. Natural Variation and Evolution of the Avirulence Genes in Magnaporthe Oryzae. American Phytopathological Society. published online.
Identification of blast resistance genes for managing rice blast disease - (Abstract Only)
Wang, J., Jia, Y., Wen, J., Liu, W., Ren, J. 2012. Identification of blast resistance genes for managing rice blast disease. American Phytopathological Society Annual Meeting. Providence, RI. p.579. August 4-8, 2012.
Identification of the rice blast resistance gene Pi-b in the national small grains collection - (Peer Reviewed Journal)
RoyChowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Identification of the rice blast resistance gene Pi-b in the national small grains collection. Phytopathology 102(7):700-706.
Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations - (Proceedings)
Pinson, S.R., Gibbons, J., Jia, Y., Yeater, K.M. 2013. Putative fissure-resistance QTLs mapped to chromosomes 1 and 8 based on allelic frequency differences observed between fissure-resistant and fissure-susceptible progeny from two segregating populations. 35TH Rice Technical Working Group Meeting Proceedings, February 27, - March 1, 2012 Hot Springs, Arkansas. CDROM
Analysis of rice blast resistance in rice breeding parents from USA using molecular markers and pathogenicity assays - (Peer Reviewed Journal)
Zhao, G., Yan, Z., Jia, Y., Deren, C.W., Dai, L. 2012. Analysis of rice blast resistance in rice breeding parents from USA using molecular markers and pathogenicity assays. Molecular Plant Breeding of China. 10:207-213.
Induction of avirulence in U.S. virulent field isolates of Magnaporthe oryzae by AVR-Pita 1 - (Proceedings)
Dai, Y., Crowley, E.W., Correll, J.C., Jia, Y. 2014. Induction of avirulence in U.S. virulent field isolates of Magnaporthe oryzae by AVR-Pita 1. Poster presentation for International Plant & Animal Genome XX/ January 14-18, 2012, San Diego, CA.
Structure, Function, Interaction, Co-evolution of Rice Blast Resistance Genes - (Peer Reviewed Journal)
Roychowdhury, M., Jia, Y., Cartwright, R.D. 2012. Structure, function, interaction, co-evolution of rice blast resistance genes. Acta Agronomica Sinica. 38: 381-393.
Understanding rice heterosis using deep sequencing - (Abstract Only)
Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K.A., Pellgrini, M., Jacobsen, S.E., Mcclung, A.M. 2012. Understanding rice heterosis using deep sequencing. Rice Technical Working Group Meeting Proceedings. Feb. 27 - Mar. 1, 2012. Hot Springs, AR. pg. 46-47..
Identification of expressed genes in the mapped QTLs for yield related traits in rice - (Abstract Only)
Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K.A., Pellgrini, M., Jacobsen, S.E., Mcclung, A.M. 2012. Identification of expressed genes in the mapped QTLs for yield related traits in rice. Rice Technical Working Group Meeting Proceedings. Feb. 27 - Mar. 1, 2012. Hot Springs, AR. pg. 61.
Understanding of evolutionary genomics of invasive species of rice - (Abstract Only)
Jia, Y., Gealy, D., Burgos, N., Olsen, K., and Caceido, A. 2012. Understanding of Evolutionary Genomics of Invasive Species of Rice. Page 46.
Characterization of genetic diversity of rice blast fungus in Arkansas field isolates - (Abstract Only)
Jia, Y., Xing, J., Crrell, J. Lee, FN. Cartwright, R., Cao, M., Yuan, L. 2012. Characterization of genetic diversity of rice blast fungus in Arkansas field isolates. Page 77.
Response to early generation selection for resistance to rice kernel fissuring - (Peer Reviewed Journal)
Pinson, S.R., Jia, Y., Gibbons, J. 2013. Response to early generation selection for resistance to rice kernel fissuring. Crop Science. 52:1482-1492.
Genomic structure of weedy rice - (Abstract Only)
Hyma, K., Olsen, K., Jia, Y., Caicedo, A. 2012. Genomic structure of weedy rice. Annual International Plant & Animal Genome Conference. Abstract for conference.
Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA - (Peer Reviewed Journal)
Lee, S., Jia, Y., Jia, M.H., Gealy, D.R., Olsen, K.M., Caicedo, A.L. 2011. Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA. PLoS One. 6(10):e26260. doi:10.1371/journal.pone.0026260.
Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines - (Peer Reviewed Journal)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Wang, Y., Tabien, R.E., Li, Z. 2012. Registration of a rice gene-mapping population consisting of 'TeQing'-into-'Lemont' backcross introgression lines. Journal of Plant Registrations. 6(1):128-135. doi: 10.3198/jpr2011.02.0066crmp.
Comparative analysis of putative pathogenesis-related gene expression in two Rhizoctonia solani pathosystems - (Peer Reviewed Journal)
Rioux, R., Manmathan, H., Singh, P., De Los Reyes, B., Jia, Y., Tavantzis, S. 2011. Comparative analysis of putative pathogenesis-related gene expression in two Rhizoctonia solani pathosystems. Current Genetics. 57:391-408.
Registration of four rice germplasm lines with improved resistance to sheath blight and blast diseases - (Peer Reviewed Journal)
Jia, Y., Liu, G., Correa-Victoria, F.J., Mcclung, A.M., Oard, J.H., Bryant, R.J., Jia, M.H., Corell, J.C. 2012. Registration of four rice germplasm lines with improved resistance to sheath blight and blast diseases. Journal of Plant Registrations. 6(1):95-100.
Molecular evolution of flowering time loci in U.S. weedy rice - (Abstract Only)
Thurber, C., Olsen, K., Jia, Y., Caicedo, A. 2011. Molecular evolution of flowering time loci in U.S. weedy rice [abstract]. In: Botany 2011, July 9 – 13, 2011, St. Louis, Missouri. p. 274.
Inoculation and Scoring Methods for Rice Sheath Blight Disease Caused by Rhizoctonia solani - (Book / Chapter)
Jia, Y., Liu, G., Park, D., Yang, Y. 2013. Inoculation and scoring methods for rice sheath blight disease caused by Rhizoctonia solani. In: Yang, Y., editor. Rice Protocols. Methods in Molecular Biology Book Series, Volume 956. Humana Press. p. 257-268.
Analysis of rice blast resistance gene Pi-z in rice germplasm using pathogenicity assays and DNA markers - (Peer Reviewed Journal)
RoyChowdhury, M., Jia, Y., Jackson, A.K., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Analysis of rice blast resistance gene Pi-z in rice germplasm using pathogenicity assays and DNA markers. Euphytica. 184:35-46.
Sheath-blight resistance QTLs and in japonica rice germplasm - (Peer Reviewed Journal)
Nelson, J., Oard, J.H., Groth, D., Utomo, H., Jia, Y., Liu, G., Moldenhauer, K.K., Correa-Victoria, F.J., Fjellstrom, R.G., Scheffler, B.E., Prado, G.A. 2012. Sheath-blight resistance QTLs and in japonica rice germplasm. Euphytica. 184:23-24. 10.1007/s10681-011-0475-1.
The short and the long of it: SD1 polymorphism and the evolution of growth trait divergence in U.S. weedy rice - (Peer Reviewed Journal)
Reagon, M., Thurber, C.S., Olsen, K.M., Jia, Y., Caicedo, A.L. 2011. The short and the long of it: SD1 polymorphism and the evolution of growth trait divergence in U.S. weedy rice. Molecular Ecology. 20:3743-3756.
Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags - (Experiment Station)
Pinson, S.R., Gibbons, J., Jia, Y. 2011. Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags. Texas Rice Special Section, Highlighting Research in 2011. p. II.
Release of four new breeding lines having resistance to blast and sheath blight diseases - (Experiment Station)
Jia, Y., Bryant, R.J., Jia, M.H., McClung, A.M., Liu, G., Oard, J., Correa, F. 2011. Release of four new breeding lines having resistance to blast and sheath blight diseases. Texas Rice Special Section, Highlighting Research in 2011. p. VIII-IX.
Biocontrol-based sheath blight management to reduce fungicide use on rice - (Experiment Station)
Zhou, X., Kumar, K.A., Reddy, M.S., Liu, G., Kloepper, J.W., Jia, Y., Allen, T.W., Lu, S. 2011. Biocontrol-based sheath blight management to reduce fungicide use on rice. Texas Rice Special Section, Highlighting Research in 2011. p. XXIV-XXV.
Molecular mapping of yield related traits in a recombinant inbred line population of a Nipponbare x 93-11 cross and identification of candidate genes associated with heterosis in rice - (Abstract Only)
Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K., Pellegrini, M., Jacobsen, S., McClung, A.M., Meyers, B., Wang, G. 2011. Molecular mapping of yield related traits in a recombinant inbred line population of a Nipponbare x 93-11 cross and identification of candidate genes associated with heterosis in rice [abstract]. American Society of Plant Biologists Annual Meeting, Minneapoli, Minnesota. Abstract P15068.
Genetic and genomic dissection of resistance genes to the rice sheath blight pathogen - (Abstract Only)
Jia, Y. 2010. Genetic and genomic dissection of resistance genes to the rice sheath blight pathogen. Plant and Animal Genome Conference. http://www.intl-pag.org/19/abstracts/P05b_PAGXIX_257.html.
Isolation and characterization of a phytotoxin from Rhizoctonia solani, the causal agent of rice sheath blight - (Peer Reviewed Journal)
Yang, Y., Yang, M., Li, M., Jia, Y., Zhou, E. 2011. Isolation and characterization of a phytotoxin from Rhizoctonia solani, the causal agent of rice sheath blight. Asian Journal of Chemistry 23(8):3500-3508.
Characterization of the Pi-b Rice Blast Resistance Gene in the National Small Grains - (Abstract Only)
Roychowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R.D. 2011. Characterization of the Pi-b Rice Blast Resistance Gene in the National Small Grains. American Phytopathology Society. 101:S156.
Linkage Block and Recombination Suppression at the Pi-ta locus at the Centromere Region of Rice Chromosome 12 - (Abstract Only)
Jia, Y., Jia, M.H., Liu, G. 2011. Linkage Block and Recombination Suppression at the Pi-ta locus at the Centromere Region of Rice Chromosome 12. American Phytopathology Society. 101:S82.
Mapping Quantitative Trait Loci for Resistance to Rice Blast - (Peer Reviewed Journal)
Jia, Y., Liu, G. 2011. Mapping quantitative trait loci for resistance to rice blast. Phytopathology. 101(2):176-181.
Development of genetic and molecular toolboxes to control both rice blast and sheath blight - (Proceedings)
Diversification and evolution of the avirulence gene AVR-Pita1 in field isolates of Magnaporthe oryzae - (Peer Reviewed Journal)
Dai, Y., Jia, Y., Correll, J.C., Wang, X., Wang, Y. 2010. Diversification and evolution of the avirulence gene AVR-Pita1 in field isolates of Magnaporthe oryzae. Fungal Genetics and Biology. 47:973-980.
Development of strategies to manage rice blast disease in the USA - (Proceedings)
Jia, Y., Lin, M.J., Dai, Y., Costanzo, S., Lee, S., Rubinelli, F.G., Green, E.A., Jia, M.H., Mcclung, A.M., Fjellstrom, R.G., Correll, J.C., Roy-Chowdhury, M., Cartwright, R., Lee, F.N., Moldenhauer, K.K., Liu, G., Zhou, X.G., Wang, X., Wu, D., Rioux, R.A., Tavantzis, S., Xing, J., Yan, L., Singh, P. 2010. Development of strategies to manage rice blast disease in the USA. Symposium Proceedings. IV-P-62.
New insight for two major rice blast R genes: Pi-ta and Pi-km - (Abstract Only)
Costanzo, S., Yang, Y., Jia, Y. 2010. New insight for two major rice blast R genes: Pi-ta and Pi-km [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Abstract II-CO-84.
Evolutionary dynamics and structure of the rice blast resistance locus Pi-ta in wild, cultivated, and US weedy rice - (Abstract Only)
Lee, S., Jia, Y., Costanzo, S., Olsen, K.M., Caicedo, A., Gealy, D.R., Jia, M.H. 2010. Evolutionary dynamics and structure of the rice blast resistance locus Pi-ta in wild, cultivated, and US weedy rice [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Abstract II-CO-85.
Identification of rice blast resistant gene Pi-z(t) in NSGC using DNA markers and pathogenicity assays - (Abstract Only)
Roy-Chowdhury, M., Jia, Y., Jia, M.H., Jackson, A.K., Fjellstrom, R.G., Cartwright, R.D. 2010. Identification of rice blast resistant gene Pi-z(t) in NSGC using DNA markers and pathogenicity assays [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract IV-CP-51.
Characterization of rice lesion mimic mutants of 93-11 for a better understanding of general host defense response to both rice blast and sheath blight diseases - (Abstract Only)
Wang, X., Wu, D., Jia, Y., Zhang, M. 2011. Characterization of rice lesion mimic mutants of 93-11 for a better understanding of general host defense response to both rice blast and sheath blight diseases [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. p. 23.
Understanding the molecular mechanism of instability of the avirulence gene AVR-Pita1 in field isolates of Maganporthe oryzae - (Abstract Only)
Dai, Y., Correll, J.C., Jia, Y. 2010. Understanding the molecular mechanism of instability of the avirulence gene AVR-Pita1 in field isolates of Maganporthe oryzae [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract I-CP-12.
Rice blast disease in Texas - (Proceedings)
Zhou, X.G., Mcclung, A.M., Jia, Y. 2010. Rice blast disease in Texas. Symposium Proceedings. IV-P-65.
Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies - (Proceedings)
Reddyvari-, C.V., Madhav, S., Nobuta, K., Sreerekha, M.V., Chen, S., Songkumarn, P., Jia, Y., Meyers, B.C., Wang, G. 2010. Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract II-CP-30.
Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies - (Abstract Only)
Reddyvari-Channaraya, V., Madhav, M., Nobuta, K., Sreerekha, M.V., Chen, S., Songkumarn, P., Jia, Y., Meyers, B.C., Wang, G. 2011. Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas p. 75.
Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta and the corresponding avirulence gene AVR-Pita1 - (Abstract Only)
Jia, Y. 2011. Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta and the corresponding avirulence gene AVR-Pita1 [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. p. 9.
Mapping quantitative trait loci of rice to blast using physiological races of the fungus - (Abstract Only)
Liu, G., Jia, Y. 2010. Mapping quantitative trait loci of rice to blast using physiological races of the fungus [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract IV-P-56.
Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice - (Peer Reviewed Journal)
Reagon, M., Thurber, C.S., Gross, B.L., Olsen, K.M., Jia, Y., Caicedo, A.L. 2010. Genomic patterns of nucleotide diversity in divergent populations of U.S. weedy rice. BMC Evolutionary Biology. 10(180):1-16.
New method opens opportunity to proactively select for fissure resistance in early breeding generations - (Experiment Station)
Pinson, S.R., Gibbons, J.R., Jia, Y. 2010. New method opens opportunity to proactively select for fissure resistance in early breeding generations. Texas Experiment Station Field Day Handout. VI-VII - http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf..
Establishment of new rice disease nurseries in Texas - (Experiment Station)
Zhou, X.G., Tabien, R.E., Jia, Y., Mcclung, A.M., Mccauley, G., Liu, G., Vawter, J. 2010. Establishment of new rice disease nurseries in Texas. Texas Experiment Station Field Day Handout. Texas rice Special Section XVII.
Gene discovery of crop disease in the postgenome era - (Book / Chapter)
Jia, Y. 2011. Gene discovery of crop disease in the postgenome era. In: Gu, W., Wang, Y., editors. Gene Discovery for Disease Models, 1st edition. John Wiley & Sons, Inc. p. 425-441.
Co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita1 - (Abstract Only)
Jia, Y. 2010. Co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita1. In: 19th International Plant Resistance to Insects, Charleston, SC, March 28-31,2010.
Sequence variation at the rice blast resistance gene Pi-km locus: Implications for the development of allele specific markers - (Peer Reviewed Journal)
Costanzo, S., Jia, Y. 2010. Sequence variation at the rice blast resistance gene Pi-km locus: Implications for the development of allele specific markers. Plant Science. 178-523-530.
Molecular evolution of the sh4 shattering locus in U.S. weedy rice - (Peer Reviewed Journal)
Thurber, C.S., Reagon, M., Gross, B.L., Olsen, K.M., Jia, Y., Caicedo, A.L. 2010. Molecular evolution of the sh4 shattering locus in U.S. weedy rice. Molecular Ecology. 19:3271-3284.
Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1 - (Proceedings)
Pinson, S.R., Jia, Y., Gibbons, J. 2010. Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1. Rice Technical Working Group Meeting Proceedings. CDROM.
Confirming QTLs and finding additional Loci responsible for resistance to Sheath Blight in Rice - (Proceedings)
Lui, G., Jia, Y., Mcclung, A.M., Oard, Correll, J.C. 2010. Confirming QTLs and finding additional Loci responsible for resistance to Sheath Blight in Rice. In: Proceedings of the 33rd Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Characterization of the Recombinant Inbred Line Population Derived from the Cross of Nipponbare/9311 - (Proceedings)
Liu, G., Jia, Y., Jia, M.H., Venu, R., Wang, G., Meyers, B., McClung, A.M. 2010. Characterization of the Recombinant Inbred Line Population Derived from the Cross of Nipponbare/9311. In: Proceedings of the 33rd Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Characterization of interacting genes with the rice blast fungus avirulence gene AVR-Pita - (Abstract Only)
Xing, J., Lee, S., Jia, Y., Yuan, L. 2010. Characterization of interacting genes with the rice blast fungus avirulence gene AVR-Pita. American Phytopathological Society Annual Meeting, Feb. 7-8, 2010, Orlando, FL. CDROM
New Marker Development for the Rice Blast Resistance Gene Pi-km - (Proceedings)
Costanzo, S., Jia, Y. 2010. New Marker Development for the Rice Blast Resistance Gene Pi-km. In: Proceedigs 33rd Rice Technical Working Group Meetings, February 22-24, 2010, Biloxi, MS. CDROM.
Linkage Drag: Implication for Plant Breeding - (Proceedings)
Jia, Y., Costanzo, S., Lee, S., Lin, M.J., Jia, M.H. 2010. Linkage Drag: Implication for Plant Breeding. In: Proceedings of the 33rd Rice Technical Working Group Meeting. CDROM.
An update of genetic studies of disease resistance genes and their utilizations for rice protection - (Proceedings)
Jia, Y., Costanzo, S., Lee, S., Dai, Y., Correll, J., Roy-Chodhury, M., Cartwright, R., Lee, F. 2010. An update of genetic studies of disease resistance genes and their utilizations for rice protection. In: Proceedings of the Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Compare and contrast invasive growths and global gene expressions of rice after infections with rice blast and sheath blight pathogens - (Proceedings)
Jia, Y., Wang, G.L. 2010. Compare and contrast invasive growths and global gene expressions of rice after infections with rice blast and sheath blight pathogens [abstract]. Rice Technical Working Group Meeting Proceedings, February 18-20, 2008, San Diego, California. CDROM.
Understanding the molecular mechanisms of the instability of rice blast resistance - (Proceedings)
Jia, Y. Understanding the molecular mechanisms of the instability of rice blast resistance. In: Proceedings of Plant and Animal Genome XVIII Conference, January 9-13, 2010, San Diego, CA. p. 521.
Molecular evolution of weed-adaptive traits in US red rice populations - (Proceedings)
Olsen, K.M., Gross, B.L., Hsu, S., Reagon, M., Jia, Y., Caicedo, A.L. 2010. Molecular evolution of weed-adaptive traits in US red rice populations. Poster presented at the Plant and Animal Genome XVIII Conference, San Diego, CA. January 9-13, 2010.
The origin of weediness in U.S. red rice - (Abstract Only)
Caicedo, A.L., Reagon, M., Thurber, C.S., Olsen, K.L., Gross, B.L., Jia, Y. 2010. The origin of weediness in U.S. red rice [abstract]. Plant and Animal Genome Conference Proceedings, January 9-13, 2010, San Diego, California. Abstract W629.
Seeing red: The origin of grain pigmentation in US weedy rice - (Peer Reviewed Journal)
Goss, B.L., Reagon, M., Hsu, S., Caicedo, A.L., Jia, Y., Olsen, K.M. 2010. Seeing red: The origin of grain pigmentation in US weedy rice. Molecular Ecology. 19:3380-3393.
Registration of 'RU9101001'/'Katy' recombinant inbred lines of rice - (Peer Reviewed Journal)
Jia, Y., Moldenhauer, K.A. 2010. Development of morogenic and digenic rice lines for blast resistance genes of Pi-ta, Pi-kh/Pi-ks. Journal of Plant Registrations. 4:163-166.
A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values - (Proceedings)
Pinson, S.R., Liu, G., Jia, M.H., Jia, Y., Fjellstrom, R.G., Sharma, A., Yang, Y., Tabien, R.E., Li, Z. 2009. A population of ‘TeQing’-into-‘Lemont’ chromosome segment substitution lines supports QTL discovery, fine-mapping, and determination of breeding values. 6th International Rice Genetics Symposium on Nov. 16-18, 2009, Manilla, Philippines. P9-1 Page 215.
Structural and expressional analysis of the B-hordein genes in Tibetan hull-less barley - (Peer Reviewed Journal)
Han, Z., Wu, F., Deng, G., Qian, G., Yu, M., Jia, Y. 2009. Structural and expressional analysis of the B-hordein genes in Tibetan hull-less barley. Genetica. 138-227-239.
Evolutionary dynamics of the genomic region around the blast resistance gene Pi-ta in AA genome Oryza species - (Peer Reviewed Journal)
Lee, S., Costanzo, S., Jia, Y., Olsen, K.M., Caicedo, A.L. 2009. Evolutionary dynamics of the genomic region around the blast resistance gene Pi-ta in AA genome Oryza species. Genetics. 183:1315-1325.
A user friendly method to isolate and single spore the fungi Magnaporthe oryzae and Magnaporthe grisea obtained from diseased field samples - (Peer Reviewed Journal)
Jia, Y. 2009. A user friendly method to isolate and single spore the fungi Magnaporthe oryzae and Magnaporthe grisea obtained from diseased field samples. Plant Health Progress. Available: doi:10.1094/PHP-2009-1215-01-BR.
Molecular Plant Pathology: Develop tools and resources for crop protection - (Experiment Station)
Structural and functional analysis of rice blast avirulence gene AVR-Pita1 in Magnaporthe oryzae - (Experiment Station)
RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield - (Abstract Only)
Mcclung, A.M., Boza, E., Brooks, S.A., Correll, J., Eizenga, G.C., Fjellstrom, R.G., Groth, D.E., Jia, Y., Jodari, F., Linscombe, S.D., Liu, G., Moldenhauer, K.K., Nelson, J.C., Oard, J., Pinson, S.R., Prasad, B., Scheffler, B.E., Yeater, K.M., Wang, Y. 2009. RiceCAP: Progress in identifying QTL for sheath blight resistance and milling yield. American Society of Agronomy Abstracts.
Alternatively spliced transcripts of Pi-ta blast resistance gene in Oryza sativa - (Peer Reviewed Journal)
Costanzo, S., Jia, Y. 2009. Alternatively spliced transcripts of Pi-ta blast resistance gene in Oryza sativa. Plant Science. 177:468-478.
Characterization of Pi-ta Blast resistance gene in an international rice core collection - (Peer Reviewed Journal)
Wang, X., Fjellstrom, R.G., Jia, Y., Yan, W., Jia, M.H., Scheffler, B.E., Wu, D., Shu, Q., McClung, A.M. 2010. Characterization of Pi-ta Blast resistance gene in an international rice core collection. Plant Breeding. 129(5):491-501.
Selection for fissure resistance now made possible in early breeding generations - (Experiment Station)
Pinson, S.R., Gibbons, J., Jia, Y. 2009. Selection for fissure resistance now made possible in early breeding generations. Texas Rice, Highlighting Research in 2009. pp. VI-VII.
Artificial introgression of a large fragment around the Pi-ta rice blast resistance gene in backcross progenies and several elite rice cultivars - (Peer Reviewed Journal)
Jia, Y. 2009. Artificial introgression of a large fragment around the Pi-ta rice blast resistance gene in backcross progenies and several elite rice cultivars. Heredity. 103(4):333-339.
Current progress on genetic interactions of rice with rice blast and sheath blight fungi - (Peer Reviewed Journal)
Jia, Y., Liu, G., Costanzo, S., Lee, S., Dai, Y. 2009. Current progress on genetic interactions of rice with rice blast and sheath blight fungi. Frontiers of Agriculture in China. 3(3):231-239.
Mapping quantitative trait loci responsible for resistance to rice sheath blight disease using greenhouse assays - (Peer Reviewed Journal)
Liu, G., Jia, Y., Correa-Victoria, F.J., Prado, G.A., Yeater, K.M., McClung, A.M., Correll, J.C. 2009. Mapping quantitative trait loci responsible for resistance to rice sheath blight disease using greenhouse assays. Phytopathology. 99(9):1078-1084.
Identification of two major resistance genes against race IE-1k of Magnaporthe oryzae in the indica rice cultivar ZHE733 - (Peer Reviewed Journal)
Lee, S., Wasmishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Identification of two major resistance genes against race IE-1k of Magnaporthe oryzae in the indica rice cultivar ZHE733. Molecular Breeding. 24:127-134.
Determination of resistance spectra of the Pi-ta and Pi-k genes to US races of Magnaporthe oryzae causing rice blast in a recombinant inbred line population - (Peer Reviewed Journal)
Jia, Y., Lee, F.N., McClung, A.M. 2009. Determination of resistance spectra of the Pi-ta and Pi-k genes to U.S. races of Magnaporthe oryzae causing rice blast in a recombinant inbred line population. Plant Disease. 93(6):639-644.
Structural and functional analysis of the avirulence gene AVR-Pita1 of the rice blast fungus in isolates of Magnaporthe oryzae worldwide - (Abstract Only)
Dai, Y., Jia, Y., Correll, J.C. 2009. Structural and functional analysis of the avirulence gene AVR-Pita1 of the rice blast fungus in isolates of Magnaporthe oryzae worldwide [abstract]. In: Plant and Animal Genome XVII Conference Abstracts. January 10-14, 2009, San Diego, California. P679.
Molecular evolution and strong selective sweep at the rice blast resistance gene Pi-ta during crop domestication - (Proceedings)
Lee, S., Jia, Y. 2009. Molecular evolution and strong selective sweep at the rice blast resistance gene Pi-ta during crop domestication. In: Proceedings Plant and Animal Genome XVII Conference, January 10-14, 2009, San Diego,CA. P243.
Mapping two major resistance genes in an indica cultivar Zhe733 to the race IE-1K of Magnaporthe oryzae - (Proceedings)
Lee, S., Wamishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Mapping two major resistance genes in an indica cultivar Zhe733 to the race IE-1K of Magnaporthe oryzae. In: Proceedings of Plant and Animal Genome XVII Conference, January 10-14-2009, San Diego, CA. W506.
Worldwide distribution and origin of rice blast resistance gene Pi-ta - (Proceedings)
Xueyan, W., Fjellstrom, R.G., Jia, Y., Yan, W., Jia, M.H., Scheffler, B.E., Dianxing, W., Qingyao, S., McClung, A.M. 2009. Worldwide distribution and origin of rice blast resistance gene Pi-ta. In: Proceedings of the Plant and Animal Genome Conference XVII, January 10-14-2009, San Diego, CA. P116.
Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts - (Proceedings)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2009. Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts. Rice Utilization Workshop Proceedings. http://www.usarice.com/doclib/124/3957.pdf.
Origins and evolution of weedy rice in the US - (Proceedings)
Olsen, K.M., Reagon, M., Caicedo, A.L., Gross, B.L., Jia, Y., Lee, S. 2009. Origins and evolution of weedy rice in the US. In: Proceedings of Plant and Animal Genome Conference XVII, January 10-14, 2009, San Diego, CA. W506.
Field resistance expressed when the PI-TA gene is compromised by Magnaporthe oryzae - (Book / Chapter)
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C. 2009. Field resistance expressed when the PI-TA gene is compromised by Magnaporthe oryzae. In: Wang, G.-L., Valen, B., editors. Advances in Genetics, Genomics and Control of Rice Blast Disease. Springer Science and Media. p. 281-290.
Examination of the rice blast pathogen population diversity in Arkansas, USA – Stable or Unstable? - (Book / Chapter)
Correll, J.C., Boza, E.J., Seyran, E., Cartwright, R.D., Jia, Y., Lee, F.N. 2009. Examination of the rice blast pathogen population diversity in Arkansas, USA – Stable or Unstable? In: Wang, X., Balent, B., editors. Advance in Genetics, Genomics, and Control of Rice Blast Disease. Springer, Berlin. p. 217-228.
Signaling in the rice and Rhizoctonia pathosystem - (Proceedings)
Early generation selection for resistance to rice kernel fissuring proves effective - (Abstract Only)
Pinson, S.R., Gibbons, J.W., Jia, Y. 2008. Early generation selection for resistance to rice kernel fissuring proves effective. [abstract] American Society of Agronomy Abstracts. p. 552-8.
Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relataives - (Peer Reviewed Journal)
Wang, X., Jia, Y., Shu, Q., Wu, D. 2008. Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relataives. Phytopathology. 98:1305-1311.
Sequence variation of the rDNA internal transcribed spacer (ITS) region among isolates of Rhizoctonia solani - (Proceedings)
Gomaa, N.M., Rothrock, C.S., Jia, Y. 2008. Sequence variation of the rDNA internal transcribed spacer (ITS) region among isolates of Rhizoctonia solani. Proceedings of 4th International Symposium of Rhizoctonia, Aug. 20-22, 2008, Berlin Germany. p. 50.
Understanding the molecular mechanisms of rice blast resistance using rice mutants - (Proceedings)
Jia, Y. 2009. Understanding the molecular mechanisms of rice blast resistance using rice mutants. Shu, Q.Y., editor, Induced Plant Mutations in the Genomics Era. Food and Agriculture Organization of the United Nations, Rome. p. 375-378.
Signaling in the Rhizoctonia solani-rice pathosystem - (Proceedings)
Jia, Y. 2008. Signaling in the Rhizoctonia solani-rice pathosystem. Symposium Proceedings. p. 14.
Analysis of genomic variation of rice blast resistance gene Pi-ta in oryza species - (Proceedings)
Lee, S., Jia, Y. 2008. Analysis of genomic variation of rice blast resistance rene Pi-ta in oryza species. American Phytopathology Society. 98:S87.
Development of the recombinant inbred line population of tropical japonica Lemont crossed with indica Jasmine 85 - (Proceedings)
Jia, Y., Liu, G., McClung, A.M. 2008. Development of the recombinant inbred line population of tropical japonica Lemont crossed with indica Jasmine 85. American Phytopathology Society 98:S75.
Structural and functional analysis of the rice blast fungus avirulence gene AVR-Pita - (Proceedings)
Dai, Y., Jia, Y., Wang, X., Lee, F.N., Wang, Y., Correll, J.C. 2008. Structural and functional analysis of the rice blast fungus avirulence gene AVR-Pita. American Phytopathology Society. 98:S44.
Identification of quantitative trait loci (QTLs) responsible for sheath blight resistance in rice using recombinant inbred line population of Lemont X Jasmine 85 - (Proceedings)
Liu, G., Jia, Y., Correa-Victoria, F., McClung, A.M. 2008. Identification of quantitative trait loci (QTLs) responsible for sheath blight resistance in rice using recombinant inbred line population of Lemont X Jasmine 85 [abstract]. American Phytopathology Society. 98:S92.
Understanding the co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita - (Book / Chapter)
Jia, Y., Wang, X., Costanzo, S., Lee, S. 2009. Understanding the co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita. In: Wang, X., Valent, B., editors. Advances in Genetics, Genomics and Control of Rice Blast Disease. Springer, Berlin. p. 137-148.
Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles - (Peer Reviewed Journal)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Jia, M.H., Jia, Y., Fjellstrom, R.G., Mackill, D., Li, Z. 2008. Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles. Journal of Plant Registrations. 2(3):251-254.
Mapping of a genetic component required for Pi-ta-mediated signal recognition - (Proceedings)
Costanzo, S., Jia, M.H., Jia, Y. 2008. Mapping of a genetic component required for Pi-ta-mediated signal recognition. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation - (Proceedings)
Pinson, S.R., Wang, Y., Liu, G., Jia, M.H., Jia, Y., Sharma, A., Fjellstrom, R.G., Tabien, R.E. 2008. Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Identification of SSR markers for a broad-spectrum blast resistance gene Pi-20(t) for marker-assisted breeding - (Peer Reviewed Journal)
Li, W., Lei, C., Cheng, Z., Jia, Y., Huang, D., Liu, Z., Wang, J., Shi, K., Zhang, X., Su, N., Guo, X., Zhai, H., Wan, J. 2008. Identification of SSR markers for a broad-spectrum blast resistance gene Pi-20(t) for marker-assisted breeding. Molecular Breeding. 22:141-149.
Identification of a new locus Ptr(t) required for rice blast resistance gene Pi-ta-mediated resistance - (Peer Reviewed Journal)
Jia, Y., Marin, R. 2008. Identification of a new locus Ptr(t) required for rice blast resistance gene Pi-ta-mediated resistance. Molecular Plant-Microbe Interactions. 21(4):396-403.
Global Gene Expression of Rice after Infections with Rice Blast and Sheath blight Pathogens - (Proceedings)
Jia, Y., Wang, G., Valent, B. 2008. Global gene expression of rice after infections with rice blast and sheath blight pathogens. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Mechanisms of Rice Blast Resistance and Its Implication for Breeding for Improved Resistance - (Proceedings)
Jia, Y. 2008. Mechanisms of Rice Blast Resistance and Its Implication for Breeding for Improved Resistance. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Identification of Sheath Blight Resistance QTLs in Rice Using Recombinant Inbred Line Population of Lemont X Jasmine 85 - (Proceedings)
Liu, G., Jia, Y., Correa, F., Jia, M.H., McClung, A.M., Groth, D., Correll, J.C., Rutger, J.N. 2008. Identification of sheath blight resistance QTLs in rice using recombinant inbred line population of Lemont X Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Development and Characterization of Deletion and Mapping Populations for Functional Genomics and Rice Breeding - (Proceedings)
Jia, Y., Rutger, J.N., Moldenhauer, K.K., Gibbons, J. 2008. Development and characterization of deletion and mapping populations for functional genomics and rice breeding. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Molecular Characterization of the Recombinant Inbred Line Population of the Cross of Lemont with Jasmine 85 - (Proceedings)
Liu, G., Jia, Y., Jia, M.H., McClung, A.M., Correll, J.C. 2008. Molecular characterization of the recombinant inbred line population of the cross of Lemont with Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Analysis of the effectiveness of the rice blast resistance gene Pi-ta - (Proceedings)
Costanzo, S., Wang, X., Jia, Y. 2008. Analysis of the effectiveness of the rice blast resistance gene Pi-ta. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Carolina foxtail (Alopecurus carolinianus): susceptibility and suitability as an alternative host to rice blast disease (Magnaporthe oryzae [formerly M. grisea]) - (Peer Reviewed Journal)
Jia, Y., Gealy, D.R., Lin, M., Wu, L., Black, H.L. 2008. Carolina foxtail (Alopecurus carolinianus): susceptibility and suitability as an alternative host to rice blast disease (Magnaporthe oryzae [formerly M. grisea]). Plant Disease. 92(4):504-507. doi:10.1094/PDIS-92-4-0504.
HOST ACTIVE DEFENSE RESPONSES OCCUR 24 HOURS AFTER PATHOGEN INOCULATION IN THE RICE BLAST SYSTEM - (Peer Reviewed Journal)
Jia, Y., Lin, H., Wang, Z., Valent, B., Rutger, J.N. 2007. Host active defense responses occur 24 hours after pathogen inoculation in the rice blast system. Chinese Journal of Rice Science. 14(4):302-310.
Development and characterization of RiceCAP QTL mapping population for sheath blight resistance - (Abstract Only)
Mcclung, A.M., Groth, D., Oard, J.H., Utomo, H., Moldenhauer, K.K., Boza, E., Scheffler, B.E., Jia, Y., Liu, G., Correa, F., Fjellstrom, R.G. 2007. Development and characterization of RiceCAP QTL mapping population for sheath blight resistance. [abstract] American Society of Agronomy Abstracts. p. 259-4.
A new rice gene-mapping population containing indica chromosomal segments introgressed into a tropical japonica background - (Abstract Only)
Pinson, S.R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A. 2007. A new rice gene-mapping populatin containing indica chromosomal segments introgressed into a tropical japonica background. [abstract] American Society of Agronomy Abstracts. p.277-6.
The structure and regulation of genes and consequences of their genetic mutations - (Book / Chapter)
Lee, S., Costanzo, S., Jia, Y. 2012. The structure and regulation of genes and consequences of their genetic mutations. In: Shu, Q.-Y., Forster, B.P., Nakagawa, H. editor. Plant Mutation Breeding and Biotechnology. CAB International:Cambridge. p. 33-47.
Understanding the coevolution of rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita - (Proceedings)
Jia, Y. 2007. Understanding the coevolution of rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita. Intl. Rice Blast Conference, October 8-14, 2007, Changsha, China p. 27.
Examination of the rice blast pathogen population diversity between 1990 and 2006 - Stable or unstable? - (Proceedings)
Correll, J.C., Boza, E.J., Seyran, E., Cartwright, R.D., Jia, Y., Lee, F.N. 2007. Examination of the rice blast pathogen population diversity between 1990 and 2006 - Stable or unstable? 4th Intl. Rice Blast Conference, October 108-14, 2007, Changsha, China. p. 46.
Host active defense responses occur within 24 hours after pathogen inoculation in the rice blast system - (Proceedings)
Wang Zhonghua, Jia, Y., Lin, H., Valent, B., Rutger, J.N. 2007. Host active defense responses occur within 24 hours after pathogen inoculation in the rice blast system. 4th Intl. Rice Blast Conference, October 8-14, 2007, Changsha, China. p. 37.
STUDIES ON ISOLATES OF RHIZOCTONIA SOLANI FROM ARKANSAS FOR MANAGEMENT OF RICE SHEATH BLIGHT - (Peer Reviewed Journal)
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D., Eizenga, G.C., Lee, F.N. 2007. Studies on isolates of Rhizoctonia solani from Arkansas for management of rice sheath blight. Frontiers of Agriculture in China. 1(47):361-367.
Reactive oxygen species trigger a regulatory module invovled in the early responses of rice seedlings to cold stress - (Peer Reviewed Journal)
Chen, C., Yun, K., Ressom, H., Mohanty, B., Bajic, V.B., Jia, Y., Yun, S., De Los Reyes, B.G. 2007. Reactive oxygen species trigger a regulatory module involved in the early responses of rice seedlings to cold stress. Biomed Central (BMC) Genomics. 18:175.
RL-SAGE and microarray analysis of the rice defense transcriptome after Rhizoctonia solani infection - (Peer Reviewed Journal)
Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Jantasuriyarat, C., Stahlbert, E., Li, H., Rhineheart, A., Reddy, P., Singh, P., Rutger, J.N., Kudrna, D., Wing, R., Nelson, J.C., Wang, G. 2007. Rl-sage and microarray analysis of the rice defense transcriptome after Rhizoctonia solani infection. Molecular Genetics and Genomics. 278:421-431.
Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens - (Proceedings)
Jia, Y., Jia, M.H., Gubrij, K.I., Wang, G. 2007. Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens. [abstract] American Phytopathological Society, July 28 - August 1, 2007, San Diego, CA. 97:S52.
Natural variation of rice blast resistant gene Pi-ta in Oryza species - (Proceedings)
Wang, X., Jia, Y., Shu, Q. 2007. Natural variation of rice blast resistant gene Pi-ta in Oryza species. American Phytopathological Society Meeting, July 28-August 1, 2007, San Diego, CA. 97:S120.
Molecular mechanisms of the instability of rice blast fungus avirulence gene AVR-Pita - (Proceedings)
Dai, Y., Jia, Y., Correll, J. 2007. Molecular mechanisms of the instability of rice blast fungus avirulence gene AVR-Pita. American Phytopathological Society, July 28-August 1, 2007, San Diego, CA. 97:S25.
Development of rice materials for studying the genomics of disease resistance - (Proceedings)
Jia, Y., Lin, M.J., Liu, G., Mcclung, A.M. 2007. Development of rice materials for studying the genomics of disease resistance. [abstract] American Phytopathology Society, 97:S52.
Instability of the Magnaporthe oryzae Avirulence gene AVR-Pita alters virulence - (Peer Reviewed Journal)
Zhou, E., Jia, Y., Singh, P., Correll, J.C., Lee, F.N. 2007. Instability of the Magnaporthe oryzae Avirulence gene AVR-Pita alters virulence. Fungal Genetics and Biology. 44:1024-1034.
The evolutionary genomics of weedy red rice in the U.S.A. - (Peer Reviewed Journal)
Olsen, K.M., Caicedo, A.L., Jia, Y. 2007. The evolutionary genomics of weedy red rice in the U.S.A. Journal of Integrative Plant Biology. 49:811-816.
Rapid Determination of Rice Cultivar Responses to the Sheath Blight Pathogen Rhizoctonia solani Using a Micro-Chamber Screening Method - (Peer Reviewed Journal)
Jia, Y., Coarrea-Victoria, F., McClung, A.M., Zhu, L., Liu, G., Wamishe, Y., Xie, J., Marchetti, M.A., Pinson, S.R., Rutger, J.N., Correll, J.C. 2006. Rapid determination of rice cultivar responses to the sheath blight pathogen Rhizoctonia solani using a micro-chamber screening method. Plant Disease. 91:485-489.
Evolutionary Genomics Of Invasive Weedy Rice - (Proceedings)
Olsen, K., Caicedo, A.L., Jia, Y. 2007. Evolutionary Genomics Of Invasive Weedy Rice . Plant and Animal Genome.
New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations - (Proceedings)
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G. 2007. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations. [abstract]. Plant and Animal Genome Conference XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.
Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing - (Proceedings)
Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A., Li, Z., Pinson, S.R. 2007. Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing. Plant and Animal Genome Conference Proceedings.
Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta - (Proceedings)
Jia, Y. 2007. Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta. Plant and Animal Genome Conference Proceedings.
Natural variation of the rice blast resistance gene Pi-ta in Oryza species and its corresponding avirulence gene AVR-Pita in Magnaporthe oryzae - (Proceedings)
Wang, X., Jia, Y., Correll, J., Lee, F.N., Wu, D., Shu, Q. 2007. Natural variation of the rice blast resistance gene Pi-ta in Oryza species and its corresponding avirulence gene AVR-Pita in Magnaporthe oryzae. Plant and Animal Genome Conference Proceedings.
CANDIDATE REGULATORS OF THE COLD STRESS RESPONSE GENE REGULON OF RICE - (Abstract Only)
De Los Reyes, B.G., Cheng, C., Yun, K.Y., Jia, Y., Ressom, H., Yun, S.J. 2006. Candidate regulators of the cold stress response gene regulon of rice. Proceedings 4th International Rice Genetic Symposium, Montpellier, France. p.117.
Candidate regulators of the cold stress response gene regulon of rice - (Proceedings)
De Los Reyes, B.G., Cheng, C., Yun, K.Y., Jia, Y., Ressom, H., Gibbons, J., Yun, .S. 2006. Candidate regulators of the cold stress response gene regulon of rice. Meeting Proceedings.
Translational genomics-rice research in agriculture research service - (Abstract Only)
Jia, Y. 2006. Translational genomics-rice research in agriculture research service [abstract]. China-US Biotech. Workshop, October 22-25, 2006, Beijin, China.
MOLECULAR CHARACTERIZATION OF RICE RECOMBINANT INBRED LINE POPULATION DERIVED FROM A JAPONICA-INDICA CROSS - (Peer Reviewed Journal)
Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2007. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Euphytica. 159:73-82.
RAPID SURVEY FOR PRESENCE OF A BLAST RESISTANCE GENE PI-TA IN RICE CULTIVARS USING THE DOMINANT DNA MARKERS DERIVED FROM PORTIONS OF THE PI-TA GENE - (Peer Reviewed Journal)
Wang, Z., Jia, Y., Rutger, J.N., Xia, Y. 2007. Rapid survey for presence of a blast resistance gene Pi-ta in rice cultivars using the dominant DNA markers derived from portions of the Pi-ta gene. Plant Breeding. 126:36-42.
HOST ACTIVE DEFENSE RESPONSES OCCUR WITHIN 24 HOURS POST-INOCULATION IN THE RICE BLAST SYSTEM - (Abstract Only)
Jia, Y., Lin, H., Wang, Z., Lin, M.J., Valent, B., Rutger, J.N. 2006. Host active defense responses occur within 24 hours post-inoculation in the rice blast system [abstract]. XII International Congress on Molecular Plant-Microbe Interactions. p. 91.
TWELVE RICE GERMPLASM ACCESSIONS IDENTIFIED WITH NOVEL BLAST RESISTANCE FOR US RICE VARIETY IMPROVEMENT - (Experiment Station)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2006. Twelve rice germplasm accessions identified with novel blast resistance for US rice variety improvement. In? Norman, R.J. Meullenet, J.-F. and Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2005. Arkansas Agricultural Experiment Station Research Series 540. p. 55-61. Available: http:www/uark.edu/depts/agripub/Publications/research series/.
DEVELOPMENT OF A MOLECULAR MARKER FROM THE RICE BLAST AVIRULENCE GEN AVR-PITA FOR SURVEILLANCE OF DURABLE RICE BLAST RESISTANCE CONFERRED BY PI-TA IN ARKANSAS - (Experiment Station)
Singh, P., Jia, Y., Boza, E.J., Correll, J.C., Lee, F.N. 2006. Development of a molecular marker from the rice blast avirulence gene AVR-Pita for surveillance of durable rice blast resistance conferred by Pi-ta in Arkansas. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K.., editors. B.R. Wells Rice Research Studies 2005 Arkansas Agricultural Experiment Station Research Series 540. p. 152-159.
MOLECULAR MECHANISMS OF THE INSTABILITY OF AVIRULENCE GENE AVR-PITA IN RICE BLAST FUNGUS MAGNAPORTHE ORYZAE - (Experiment Station)
Zhou, E., Jia, Y., Correll, J.C., Lee, F.N. 2006. Molecular mechanisms of the instability of avirulence gene avr-pita in rice blast fungus magnaporthe oryzae. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2005, Arkansas Agricultural Experiment Station Research Series 540. p. 160-167. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/.
INCORPORATING FOREIGN SHEATH BLIGHT RESISTANCE GENES INTO US RICE GEMPLASM - (Experiment Station)
Pinson, S.R., Fjellstrom, R.G., Shank, A.R., Oard, J., Groth, D., Jia, Y., Jia, M.H. 2006. Incorporating foreign sheath blight resistance genes into us rice gemplasm. Texas Rice, Highlighting Research 2006. pp.VI-VII.
Use of robust-long serial analysis of gene expression to identify novel fungal and plant genes. - (Book / Chapter)
Gowda, M., Varichannarayappa, V., Jia, Y., Stahlberg, E., Pampanwar, V., Soderlund, C., Want, G. 2007. Use of rl-sage analysis to identify novel fungal and plant genes involved in host-pathogen interactions. In: Ronald, P.C., editor. Plant-Pathogen Interactions: Methods and Protocols. Humana Press, Inc., Totowa, NJ. p. 131-144.
DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANTS ALTERED IN THE RICE BLAST RESISTANT GENE PI-TA-MEDIATED DISEASE RESISTANCE PATHWAY - (Abstract Only)
Jia, Y., Fjellstrom, R.G., Jia, Melissa H., Yan, W., Rutger, J.N., McClung, A.M. 2006. Development and characterization of rice mutants altered in the rice blast resistant gene pi-ta-mediated disease resistance pathway [abstract]. American Phytopathological Society Annual Meeting. Phytopathology. 96:S54.
RL-SAGE ANALYSIS OF THE RICE DEFENSE TRANSCRIPTOME DURING RICE AND RHIZOCTONIA SOLANI INTERACTION - (Abstract Only)
Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Bellizzi, M., Singh, P., Rutger, J.N., Wang, G. 2006. Rl-sage analysis of the rice defense transcriptome during rice and Rhizoctonia solani interaction [abstract]. American Phytopathological Society Abstracts. 96.
MOLECULAR AND AGRONOMIC CHARACTERIZATION OF NEWLY INTRODUCED BLAST RESISTANT RICE GERMPLASM - (Peer Reviewed Journal)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2006. Molecular and agronomic characterization of newly introduced blast resistant rice germplasm. Crop Science. 46:1870-1878.
GENOMIC ANALYSIS OF THE EARLY RESPONSES OF DEVELOPING RICE SEEDLINGS TO COLD STRESS - (Abstract Only)
Cheng, C., De Los Reyes, B.G., Jia, Y., Yun, S., Zhang, Y., Ressom, H. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress. Proceedings of the National Academy of Sciences. p. 13.
CHARACTERIZATION OF SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI AND ITS MOLECULAR INTERACTION WITH ORYZA SATIVA - (Other)
Jia, Y., Singh, P., Wamishe, Y., Jia, M.H., Gowda, M., Channaryappa, V.R., Zhou, E., Flowers, C., Lin, M.J., Wang, G.L., Rutger, J.N. 2006. Characterization of sheath blight pathogen Rhizoctonia solani and its molecular interaction with Oryza sativa. Bulletin for Biochemistry and Biotecnology of SAAS. Available: http//orgs.tntech.edu/saas/.
GENOMIC ANALYSIS OF THE EARLY RESPONSES OF DEVELOPING RICE SEEDLINGS TO COLD STRESS - (Abstract Only)
Cheng, C., De Los Reyes, B.G., Zhang, Y., Ressom, H., Jia, Y., Yun, S.J. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress [abstract]. In: Proceedings of the XIV Annual International Plant & Animal Genome Conference, Janaury 14-18, 2006, San Diego, California. p. 734.
MOLECULAR MECHANISMS OF BLAST RESISTANCE GENE PI-TA MEDIATED DEFENSE RESPONSE - (Abstract Only)
Jia, Y., Lin, M.J., Jia, M.H., Gubrij, K.I. 2006. Molecular mechanisms of blast resistance gene pi-ta mediated defense response [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 29 - March 1, 2006, Houston, Texas. 2006. CDROM.
IDENTIFICATION OF NOVEL BLAST RESISTANCE GENES IN RICE CULTIVAR ZHE733 - (Abstract Only)
Wamishe, Y., Jia, Y., Jia, M.H., Liu, G. 2006. Identification of novel blast resistance genes in rice cultivar zhe733 [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28, 2006 - March 1, 2006, Houston, Texas. 2006. CDROM.
MOLECULAR CHARACTERIZATION OF RICE RECOMBINANT INBRED LINE POPULATION DERIVED FROM A JAPONICA-INDICA CROSS - (Abstract Only)
Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2006. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Rice Technical Working Group Meeting Proceedings, Houston, Texas, February 29-March 2, 2006. 2006. CDROM.
DEVELOPMENT OF US GENETIC RESOURCES FOR RICE FUNCTIONAL GENOMICS - (Abstract Only)
Jia, Y., Rutger, J.N., Xie, J., Lin, M.J., Moldenhauer, K., Gibbons, J. 2006. Development of us genetic resources for rice functional genomics. Rice Technical Working Group Meeting Proceedings, February 29-March 2, 2006, Houston, TX. 2006 CDROM.
FIELD AND MILLING QUALITY ANALYSIS OF THE MY1 MAPPING POPULATION IN ARKANSAS - (Abstract Only)
Boza, E.J., Moldenhauer, K.A., Gibbons, J.W., Lee, F.N., Cartwright, R.D., Jia, Y., Boyette, V., Blocker, M.M. 2006. Field and milling quality analysis of the my1 mapping population in Arkansas [aabstract]. Rice Technical Working Group Meeting Proceedings, Feburary 28, 2006 -March 1, 2006, Houston, Texas. 2006. CDROM.
ADVANCES IN MARKER-ASSISTED SELECTION FOR RICE BLAST RESISTANCE - (Proceedings)
Boyett, V.A., Gibbons, J.W., Moldenhauer, K.A., Jia, Y., McClung, A.M., Fjellstrom, R.G. 2006. Advances in marker-assisted selection for rice blast resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
PROGRESS IN DEVELOPING MOLECULAR MARKERS FOR TAGGING MAGNAPORTHE GRISEA PATHOTYPES IN THE USA - (Proceedings)
Jia, Y., Zhou, E., Lee, F.N., Correll, J., Singh, P. 2006. Progress in developing molecular markers for tagging magnaporthe grisea pathotypes in the usa. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006. 2006 CDROM.
DEVELOPMENT OF MOLECULAR STRATEGIES TO CONTROL RICE SHEATH BLIGHT DISEASE - (Abstract Only)
Jia, Y., Singh, P., Jia, M.H., Wang, G., Wamishe, Y., Zhu, L., Zhou, E. 2006. Development of molecular strategies to control rice sheath blight disease [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28 - March 1, 2006, Houston, Texas. 2006. CDROM.
GENOTYPIC AND PHENOTYPIC ASSESSMENT OF THE NSGC CORE COLLECTION OF RICE FOR RESISTANCT TO PYRICULARIA GRISEA - (Proceedings)
McClung, A.M., Yan, W., Jia, Y., Lee, F.N., Marchetti, M.A., Fjellstrom, R.G. 2006. Genotypic and phenotypic assessment of the NSGC Core Collection of rice for resistance to Pyricularia grisea. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006. Houston, Texas. 2006 CDROM.
BRINGING QUANTITATIVE TRAITS UNDER BREEDER CONTROL BY COMBINING QTL MAPPING WITH CANDIDATE GENE APPROACHES: A CASE STUDY OF RICE SHEATH BLIGHT RESISTANCE - (Proceedings)
Pinson, S.R., Jia, Y., Fjellstrom, R.G., Jia, M.H., Hulbert, S., Liu, K., Nelson, J.C. 2006. Bringing quantitative traits under breeder control by combining QTL mapping with candidate gene approaches: A case study of rice sheath blight resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
CAROLINA FOXTAIL (ALOPECURUS CAROLINIANUS): SUSCEPTIBILITY AND SUITABILITY AS AN ALTERNATE HOST TO RICE BLAST DISEASE (P. GRISEA) - (Abstract Only)
Jia, Y., Gealy, D.R., Lin, M.J., Wu, L., Black, H.L. 2006. Carolina foxtail (alopecurus carolinianus): susceptibility and suitability as an alternate host to rice blast disease (p. grisea) [abstract]. In: Rice Technical Working Group Meeting Proceedings, Houston, Texas, February 29-March 2, 2006. 2006.CDROM.
PROGRESS IN DEVELOPING RNA MARKERS FOR DETERMINING DISEASE REACTIONS IN THE RICE BLAST SYSTEM - (Abstract Only)
Jia, Y., Valent, B. 2006. Progress in developing rna markers for determining disease reactions in the rice blast system [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28 - March 1, 2006, Houston, Texas. 2006. CDROM.
Molecular co-evolution of the rice Pi-ta resistance gene and Magnaporthe oryzae avirulence gene AVR-pita - (Book / Chapter)
Jia, Y., Zhou, E., Winston, E., Singh, P., Correll, J., Lee, F.N., Valent, B. 2006. Molecular co-evolution of the rice Pi-ta resistance gene and Magnaporthe oryzae avirulence gene AVR-pita. In: Sanchez, F., Quinto, C., Lopez-Luna, I.M., Geiger, O., editors. Biology of Plant Microbe Interactions. Volume 5. International Society for Molecular Plant-Microbe Interactins. p. 325-339.
MOLECULAR CO-EVOLUTION OF THE RICE PI-TA RESISTANCE GENE AND MAGNAPORTHE GRISEA AVIRULENCE GENE AVR-PITA - (Proceedings)
Jia, Y., Zhou, E., Winston, E.M., Singh, P., Correll, J., Valent, B. 2005. Molecular co-evolution of the rice Pi-ta resistance gene and Magnaporthe grisea avirulence gene AVR-Pita [abstract]. International Congress on Molecular Plant-Microbe Interactions. p. 3-7. Available: http://www.lbt.unam.mx/Cancun2005/concurrent182.html.
DEVELOPMENT AND CHARACTERIZATION OF KATY DELETION MUTANT POPULATIONS - (Peer Reviewed Journal)
Jia, Y., Xi, J., Rutger, J.N. 2006. Development and characterization of Katy deletion mutant populations. Plant Mutation Reports. 1(1):43-47.
TRANSLATIONAL GENOMICS: A CASE STUDY OF RICE PI-TA RESISTANCE GENE - (Abstract Only)
Jia, Y., Zhou, E., Winston, E., Singh, P., Wang, Z., Correll, J., Lee, F., Jia, M.H. 2005. Translational genomics: a case study of rice Pi-ta resistance gene. In: Proceedings of International Conference on Plant Molecular Breeding, October 27-30, 2005. p. 3.
APPLIED GENOMICS: A SHORT STORY OF THE RICE PI-TA RESISTANCE GENE - (Abstract Only)
Jia, Y. 2005. Applied genomics: a short story of the rice Pi-ta resistance gene [abstract]. USDA-China Cooperation Workshop, Workshop was cancelled, abstract shared among ARS-China Cooperators on October 3, 2005.
RICE GERMPLASM CHARACTERIZED FOR R-GENES AND POPULATION STRUCTURE - (Proceedings)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2006. Rice germplasm characterized for R-genes and population structure. Proceedings 10th Congress of SABRAO, August 22-23, 2005, Tsukuba, Japan. CDROM.
UNDERSTANDING THE GENETIC DIVERSITY IN ORDER TO IDENTIFY R-GENES IN ORYZA SPP AND O. SATIVA - (Abstract Only)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2005. Understanding the genetic diversity in order to identify R-genes in Oryza spp and O. sativa. In: Proceedings 5th International Rice Genetics Symposium, November 19-23, 2005, Manila, Philippines. 2005 CDROM.
Molecular aspects of rice blast disease resistance: Insights from structural and functional analysis of the Pi-ta and AVR-Pita gene pair - (Book / Chapter)
Jia, Y., Valent, B. 2009. Molecular aspects of rice blast disease resistance: Insights from structural and functional analysis of the Pi-ta and AVR-Pita gene pair. In: Datta, S., editor. Rice Improvements in the Genomic Era. Boca Raton, FL: CRC Press, Taylor & Francis Group. p. 207-236.
DISTRIBUTION OF BLAST RESISTANCE GENE PI-TA IN THE USDA RICE CORE COLLECTION - (Abstract Only)
Yan, W., Fjellstrom, R.G., McClung, A.M., Jia, Y., Bockelman, H.E. 2005. Distribution of blast resistance gene Pi-ta in the USDA rice core collection [abstract]. American Society of Agronomy Abstracts. p. 230-3.
GENOMIC ANALYSIS OF THE EARLY RESPONSES OF DEVELOPING RICE SEEDLINGS TO COLD STRESS - (Abstract Only)
Cheng, C., Zhang, Y., Ressom, H., Jia, Y., Yun, S., De Los Reyes, B.G. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress [abstract]. American Society of Plant Biologists Annual Meeting. Available: www.aspb.org/search
CONTINUED EVALUATION OF BLAST RESISTANCE GENES IN RICE WILD RELATIVES (ORYZA SPP.) AND UNIQUE RICE (O. SATIVA) ACCESSIONS UTILIZING DNA MARKERS - (Experiment Station)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Jia, Y. 2005. Continued evaluation of blast resistance genes in rice wild relatives (Oryza spp.) and unique rice (O. sativa) accessions utilizing DNA markers. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 30-37. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/
STUDIES ON ISOLATES OF RHIZOCTONIA SOLANI FROM ARKANSAS FOR MANAGEMENT OF RICE SHEATH - (Experiment Station)
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D. 2005. Studies on isolates of Rhizoctonia solani from Arkansas for management of rice sheath. Arkansas Agricultural Experiment Station Research Series 529. p. 142-148.
A PRELIMINARY CHARACTERIZATION OF THE RICE BLAST FUNGUS ON 'BANKS' RICE - (Experiment Station)
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C., Moldenhauer, K.A., Gibbons, J.W., Boyett, V., Zhou, E., Boza, E., Seyran, E. 2005. A preliminary characterization of the rice blast fungus on 'Banks' rice. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 103-110. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/
TWO MAJOR RESISTANCE GENES CONFER RESISTANCE TO RACE SHIFT ISOLATES OVERCOMING BLAST RESISTANCE GENC PI-TA - (Experiment Station)
Jia, Y., Wamishe, Y., Jia, M.H., Lin, M.J., Eizenga, G.C., Gibbons, J.W., Moldenhauer, K..K.., Correll, J.C. 2005. Two major resistance genes confer resistance to race shift isolates overcoming blast resistance genc Pi-ta. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.S.K., editors. B.R.Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 91-95 Available: http//www.uark.edu/depts/agripub/Publications/researchseries/.
Exploring genetic diversity and potential novel disease resistance genes in a collection of rice wild relatives - (Peer Reviewed Journal)
Eizenga, G.C., Agrama, H.A., Lee, F.N., Jia, Y. 2009. Exploring genetic diversity and potential novel disease resistance genes in a collection of rice wild relatives. Genetic Resources and Crop Evolution. 56:65-76.
Establishment of codominant markers for rice blast resistance gene Pi-ta - (Peer Reviewed Journal)
Wang, Z., Redus, M., Jia, Y. 2005. Establishment of codominant markers for rice blast resistance gene Pi-ta. Chinese Journal of Rice Science. 19:483-488.
Establishment of codominant marker for rice blast resistance gene pi-ta - (Peer Reviewed Journal)
Wang, Z., Redus, M., Jia, Y. 2005. Establishment of codominant marker for rice blast resistance gene pi-ta. Chinese Journal Rice Science. 19(6):483-488.
REGISTRATION OF KATY LESION MIMIC MUTANT - (Peer Reviewed Journal)
Jia, Y. 2004. Registration of Katy lesion mimic mutant. Crop Science. 45:1675.
MOLECULAR COEVOLUTION OF RICE RESISTANCE GENE PI-TA AND THE CORRESPONDING MAGNAPORTHE GRISEA AVIRULANCE GENE AVR-PITA - (Abstract Only)
Jia, Y., Winston, E.M., Singh, P., Zhou, E., Wamishe, Y., Jia, M.H., Correll, J., Rutger, J.N. 2005. Molecular coevolution of rice resistance gene pi-ta and the corresponding Magnaporthe grisea avirulance gene avr-pita [abstract]. In: Plant and Animal Genome Conference Proceedings. p. 74.
MAGNAPORTHE GRISEA RACE SHIFT FOR VIRULENCE TO THE MAJOR R GENE, PITA, IN ARKANSAS - (Abstract Only)
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C. 2005. Magnaporthe grisea race shift for virulence to the major R gene, Pita, in Arkansas. Proceedings Southern Region American Phytopathology Society. Abstract p. 116.
DEVELOPMENT AND CHARACTERIZATION OF RICE DELETION MUTANTS FOR FUNCTIONAL GENOMICS - (Abstract Only)
Jia, Y., Zhou, E., Lin, M.J., Rutger, J.N. 2004. Development and characterization of rice deletion mutants for functional genomics [abstract]. In: Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. Abstract p. 178.
MOLECULAR MECHANISMS OF DURABLE RICE BLAST RESISTANCE - (Abstract Only)
Jia, Y., Winston, E.M., Singh, P., Zhou, E., Wamishe, Y., Jia, M.H., Correll, J. 2004. Molecular mechanisms of durable rice blast resistance [abstract]. In: Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. Abstract p. 72.
GENOTYPING OF SELECTED RICE WILD RELATIVES (ORYZA SPP.) AND THEIR PROGENIES - (Abstract Only)
Eizenga, G.C., Agrama, H., Jia, Y., Lee, F.N. 2005. Genotyping of selected rice wild relatives (Oryza spp.) and their progenies [abstract]. Plant and Animal Genome Conference. p. 147.
DEVELOPMENT OF MOLECULAR STRATEGIES TO CONTROL RICE BLAST AND SHEATH BLIGHT DISEASES - (Proceedings)
Jia, Y., Singh, P., Wang, Z., Winston, E.M., Wamishe, Y., Redus, M., Rutger, J.N. 2004. Development of molecular strategies to control rice blast and sheath blight diseases. Southern Association of Agricultural Scientists Bulletin of Biochemistry and Biotechnology. 17:20-34.
DNA MARKERS IDENTIFY BLAST RESISTANCE GENES AND GENOTYPE NEWLY INTRODUCED RICE GERMPLASM - (Abstract Only)
Eizenga, G.C., Lee, F.N., Jia, Y., Yan, W. 2004. DNA markers identify blast resistance genes and genotype newly introduced rice germplasm [abstract] Agronomy Abstracts. 2004 CDROM.
RELEASE OF RICE GENETIC STOCK LESION MIMIC MUTANT 1 - (Germplasm Release)
Jia, Y. 2004. Release of rice genetic stock lesion mimic mutant 1. Germplasm Release. USDA-ARS.
WELCOME TO CHINESE VISITING SCIENTIST - (Other)
Jia, Y., Zhou, E. 2004. Welcome to Chinese visiting scientist. International Society Molecular Plant-Microbe Interactions Reporter. p. 2.
DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANT POPULATIONS FOR FUNCTIONAL GENOMICS OF HOST-PARASITE INTERACTIONS - (Abstract Only)
Jia, Y., Rutger, J.N., Wang, Z., Singh, P., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
CHARACTERIZATION OF RHIZOCTONIA SOLANI ISOLATES FROM RICE IN ARKANSAS - (Abstract Only)
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D. 2004. Characterization of Rhizoctonia solani isolates from rice in Arkansas. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):107.
MOLECULAR CHARACTERIZATION OF MAGNAPORTHE GRISEA AVIRULENCE AVR-PITA ALLELES IN US PATHOTYPES - (Abstract Only)
Winston, E.M., Singh, P., Correll, J., Jia, Y., Rutger, J.N. 2004. Molecular characterization of Magnaporthe grisea avirulence AVR-Pita alleles in US pathotypes. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
MOLECULAR EVOLUTION OF RICE PI-TA GENE AND FUNGAL MAGNAPORTHE GRISEA AVR-PITA GENE - (Abstract Only)
Jia, Y., Singh, P., Winston, E.M., Wamishe, Y., Correll, J., Valent, B. 2004. Molecular evolution of rice Pi-ta gene and fungal Magnaporthe grisea AVR-Pita gene. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
DEVELOPMENT OF MOLECULAR STRATEGIES TO CONTROL RICE SHEATH BLIGHT DISEASE - (Abstract Only)
Singh, P., Wamishe, Y., Eizenga, G.C., Lee, F.N., Jia, Y. 2004. Development of molecular strategies to control rice sheath blight disease. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):96.
DEVELOPMENT OF A CO-DOMINANT RESISTANCE GENE MARKER BY TRI-PRIMER POLYMERASE CHAIN REACTION - (Peer Reviewed Journal)
Jia, Y., Redus, M.A., Wang, Z., Rutger, J.N. 2004. Development of a co-dominant resistance gene marker by tri-primer polymerase chain reaction. Euphytica. v. 138. p. 97-105.
HOW DOES THE RICE BLAST PATHOGEN DEFEAT A RESISTANCE GENE? - (Abstract Only)
Correll, J.C., Jia, Y., Boza, E.G., Singh, P., Lee, F. 2005. How does the rice blast pathogen defeat a resistance gene? Rice Technical Working Group Meeting Proceedings. Abstract p. 104.
DEVELOPMENT OF MOLECULAR STRATEGIES TO CONTROL MAJOR RICE FUNGAL DISEASES IN THE US - (Abstract Only)
Jia, Y., Singh, P., Winston, E.M., Wamashe, Y., Correll, J., Lee, F.N., Moldenhauaer, K., Gibbons, J., Rutger, J.N. 2005. Development of molecular strategies to control major rice fungal diseases in the US [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 109.
IDENTIFICATION OF DISEASE RESISTANCE IN THE ORYZA SPP. AND FOLLOWING ITS INTROGRESSION INTO CULTIVATED RICE WITH DNA MARKERS - (Abstract Only)
Eizenga, G.C., Xiang, G., Jia, Y., Lee, F. 2005. Identification of disease resistance in the Oryza spp. and following its introgression into cultivated rice with DNA markers. Rice Technical Working Group Meeting Proceedings. Abstract p. 115.
IDENTIFICATION OF BLAST RESISTANCE GENES IN INDICA RICE GERMPLASM - (Abstract Only)
Eizenga, G.C., Refeld, R., Lee, F., Emerson, M., Xiang, G., Jia, Y., Yan, W. Identification of blast resistance genes in Indica rice germplasm. Rice Technical Working Group Meeting Proceedings. Abstract. p. 70-71.
MARKER ASSISTED SELECTION FOR THE RICE BLAST RESISTANCE GENE PI-TA: DEVELOPMENT AND USE OF AN IMPROVED CO-DOMINANT ANALYSIS METHOD - (Abstract Only)
Johnson, V.A., Redus, M., Gibbons, J.W., Moldenhauer, K.A., Jiang, J., Jia, Y. 2005. Marker assisted selection for the rice blast resistance gene pi-ta: development and use of an improved co-dominant analysis method [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 62.
MOLECULAR CHARACTERIZATION OF MAGNAPORTHE GRISEA AVIRULENCE ALLELES (AVR-PITA) IN US PATHOTYPES - (Abstract Only)
Winston, E.M., Jia, Y., Correll, J. 2005. Molecular characterization of magnaporthe grisea avirulence alleles (avr-pita) in US pathotypes. Rice Technical Working Group Meeting Proceedings. Abstract p. 110.
RICE PI-TA GENE CONFERS RESISTANCE TO TWO MAJOR PATHOTYPES OF THE RICE BLAST FUNGUS IN THE U.S. - (Abstract Only)
Jia, Y., Wang, Z., Fjellstrom, R.G., Moldenhauer, K., Flowers, C.B., Rutger, J.N. 2005. Rice pi-ta gene confers resistance to two major pathotypes of the rice blast fungus in the U.S. [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 84.
DEVELOPMENT OF A DETACHED LEAF INOCULATION METHOD FOR RAPID EVALUATION OF RICE CULTIVAR RESPONSE TO SHEATH BLIGHT PATHOGEN - (Abstract Only)
Singh, P., Jia, Y., Eizenga, G.C., Lee, F. 2005. Development of a detached leaf inoculation method for rapid evaluation of rice cultivar response to sheath blight pathogen. Rice Technical Working Group Meeting Proceedings. Abstract p. 117.
CLONING AND CHARACTERIZATION OF INDUCED GENES BY THE SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI - (Abstract Only)
Singh, P., Jia, Y., Eizenga, G.C., Lee, F. 2005. Cloning and characterization of induced genes by the sheath blight pathogen rhizoctonia solani. Rice Technical Working Group Meeting Proceedings. Abstract p. 114.
IDENTIFICATION OF BLAST RESISTANCE GENES IN RICE WILD RELATIVES (ORYZA SPP.) AND NEWLY INTRODUCED RICE (O. SATIVA) LINES - (Experiment Station)
Eizenga, G.C., Lee, F.N., Jia, Y. 2004. Identification of blast resistance genes in rice wild relatives (Oryza spp.) and newly introduced rice (O. sativa) lines. Arkansas Agricultural Experiment Station Research Series 417. p. 29-36.
RICE PI-TA GENE CONFERS RESISTANCE TO THE MAJOR PATHOTYPES OF THE RICE BLAST FUNGUS IN THE U.S. - (Abstract Only)
Jia, Y., Wang, Z., Singh, P., Redus, M., Fjellstrom, R.G., Johnson, V., Correll, J., Lee, F., Rutger, J.N. 2004. Rice Pi-ta gene confers resistance to the major pathotypes of the rice blast fungus in the U.S. [abstract]. Annual International Plant & Animal Genome Conference. Abstract P293, p. 145.
DNA MARKER IDENTTIFICATION OF ORYZA SPP. FOR INTROGRESSION OF R-GENES - (Abstract Only)
Eizenga, G.C., Xiang, G., Jia, Y., Lee, F.N. 2004. DNA marker identification of Oryza spp. for introgression of r-genes [abstract]. Annual International Plant & Animal Genome XII Conference. Available: http://www.intl-pag.org/12/abstracts/P5b_PAG12_P393_XI.html.
RICE PI-TA GENE IS CLOSELY LINKED WITH RESISTANCE TO THE MAJOR PATHOTYPES OF THE RICE BLAST FUNGUS IN THE U.S. - (Peer Reviewed Journal)
Jia, Y., Wang, Z., Fjellstrom, R.G., Moldenhauer, K.A., Azam, M., Correll, J., Lee, F.N., Xia, Y., Rutger, J.N. 2004. Rice pi-ta gene is closely linked with resistance to the major pathotypes of the rice blast fungus in the U.S. Phytopathology. 94:296-301.
MARKER ASSISTED SELECTION FOR THE CONTROL OF RICE BLAST DISEASE - (Review Article)
Jia, Y. 2003. Marker assisted selection for the control of rice blast disease. Pesticide Outlook. 14:150-152.
CHARACTERIZATION OF ISOLATE DIVERSITY IN THE RICE SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI - (Abstract Only)
Jia, Y., Singh, P., Cartwright, R., Lee, F.N., Rothrock, C.S., Eizenga, G.C., Rutger, J.N. 2003. Characterization of isolate diversity in the rice sheath blight pathogen rhizoctonia solani [abstract]. American Phytopathological Society Annual Meeting. 9-2003-0294-AMA.
In vitro identification of cultivar responses to rice sheath blight pathogen Rhizoctonia solani - (Experiment Station)
Jia, Y., Singh, P., Eizenga, G.C., Lee, F.N., Cartwright, R.D. 2003. In vitro identification of cultivar responses to rice sheath blight pathogen Rhizoctonia solani. In: Norman, R.J., Meullenet, J.-F., editors. B.R. Wells Rice Research Studies 2002. Fayetteville, AR: Arkansas Agricultural Experiment Station. Series 504:229-236.
DEVELOPMENT OF RICE BLAST PI-TA RESISTANCE GENE MARKERS FOR MARKER-ASSISTED SELECTION BREEDING - (Abstract Only)
Jia, Y., Wang, Z., Redus, M.A., Singh, P., Correll, J., Lee, F.N., Valent, B., Xia, Y., Rutger, J.N. 2003. Development of rice blast pi-ta resistance gene markers for marker-assisted selection breeding [abstract]. 15th International Plant Protection Congress Proceedings. p. 262.
DEVELOPMENT AND CHARACTERIZATION OF RICE MUTANT POPULATIONS FOR FUNCTIONAL GENOMICS OF HOST-PARASITE INTERACTIONS - (Abstract Only)
Jia, Y., Wang, Z., Singh, P., Rutger, J.N., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions [abstract]. 15th International Plant Protection Congress Proceedings. p. 64.
Identification of blast resistance genes in rice wild relatives (Oryza spp.) and selected indica lines (o. sativa) - (Experiment Station)
Eizenga, G.C., Lee, F.N., Jia, Y. 2003. Identification of blast resistance genes in rice wild relatives (Oryza spp.) and selected indica lines (o. sativa). Arkansas Agricultural Experiment Station Research Series. 504: 27-32.
DNA POLYMORPHISMS OF THE PI-TA ALLELES IN THE RICE BLAST RESISTANT AND SUSCEPTIBLE CULTIVARS - (Peer Reviewed Journal)
Rice variety improvement using marker-assisted selection - (Abstract Only)
Johnson, V.A., Gibbons, J.G., Moldenhauer, K.A., Wang, Z., Jia, Y. 2003. Rice variety improvement using marker-assisted selection. In: Norman, R.J., Meullenet, J.-F., editors. B.R. Wells Rice Research Studies 2002. Fayetteville, AR: Arkansas Agricultural Experiment Station. Series 504:66-72.
Molecular characterization of rice wild relatives (Oryza spp.) and accelerating the development of disease resistant germplasm using microsatellite markers - (Abstract Only)
Eizenga, G.C., Jia, Y. 2003. Molecular characterization of rice wild relatives (Oryza spp.) and accelerating the development of disease resistant germplasm using microsatellite markers. Plant and Animal Genome Conference Proceedings. Jan. 11-15, 2003. San Diego, CA.
THE POPULATION BIOLOGY OF THE RICE BLAST PATHOGEN MAGNAPORTHE GRISEA IN THEUNITED STATES - (Abstract Only)
UNIFORM INFECTION AND DETERMINATION OF HOST RESPONSES TO MAGNAPORTHE GRISEAON DETACHED RICE LEAVES USING SPOT INOCULATION - (Peer Reviewed Journal)
USE OF DNA MARKERS TO IDENTIFY BLASTS RESISTANCE GENES IN THE WILD RELATIVES OF RICE (ORYZA SP.) - (Experiment Station)
Eizenga, G.C., Lee, F.N., Jia, Y. 2002. USE OF DNA MARKERS TO IDENTIFY BLASTS RESISTANCE GENES IN THE WILD RELATIVES OF RICE (ORYZA SP.). Arkansas Agricultural Experiment Station Research Series. Exp. Stn. Res. Ser. 495. p.19-23.
MOLECULAR AND PATHOLOGICAL CHARACTERIZATION OF THE RICE SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI IN ARKANSAS - (Experiment Station)
Jia, Y., Singh, P., Eizenga, G.C., Lee, F.N., Cartwright, R. 2002. MOLECULAR AND PATHOLOGICAL CHARACTERIZATION OF THE RICE SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI IN ARKANSAS. Arkansas Agricultural Experiment Station Research Series. Univ. of AR Ag Exp. Stn. Res. Ser. 495. pg. 148-153.
Utilizing DNA markers to further identify the blast resistance in indica rice and other Oryza spp. germplasm - (Abstract Only)
Eizenga, G.C., Lee, F.N., Jia, Y., Yan, W. 2002. Utilizing DNA markers to further identify the blast resistance in indica rice and other Oryza spp. germplasm. American Society of Agronomy Meetings. Madison, WI [CD-ROM].
Opportunities for the development of rice blast resistant cultivars/germplasm - (Abstract Only)
Jia, Y., Zhonghua, W., Singh, P., Fjellstrom, R.G., Correll, J., Lee, F.N., Eizenga, G.C., Gealy, D.R., Gibbons, J., Moldenhauer, K.A., Rutger, N., McClung, A., Marchetti, T. 2002. Opportunities for the development of rice blast resistant cultivars/germplasm [abstract]. Proceedings of the Third International Rice Blast Conference. p. 116.
Molecular,genetic, and virulence diversity of the rice blast pathogen in the United States - (Abstract Only)
Correll, J.C., Guerber, J.C., Jia, Y., Lee, F.N. 2002. Molecular,genetic, and virulence diversity of the rice blast pathogen in the United States[abstract]. Proceedings of the Third International Rice Blast Conference. p. 102.
Analysis of AVR gene function in pathogenicity and host specificity - (Abstract Only)
Valent, B., Dalby, M., Kankanala, P., Klaahsen, D., Khang, C., Kang, S., Jia, Y., Bryan, G.T. 2002. Analysis of AVR gene function in pathogenicity and host specificity [abstract]. Proceedings of the Third International Rice Blast Conference. p. 12.
Development and evaluation of rice breeding lines for blast resistance at Arkansas, USA - (Abstract Only)
Gibbons, J.A., Lee, F.N., Jia, Y., Eason, R. 2002. Development and evaluation of rice breeding lines for blast resistance at Arkansas, USA [abstract]. Proceedings of the Third International Rice Blast Conference. p. 113.
DEVELOPMENT OF THE RICE BLAST PI-TA RESISTANCE GENE DOMINANT MARKERS - (Peer Reviewed Journal)
Jia, Y., Wang, Z., Singh, P. 2002. DEVELOPMENT OF THE RICE BLAST PI-TA RESISTANCE GENE DOMINANT MARKERS. Crop Science. 42:2145-2149.
MOLECULAR AND PATHOLOGICAL CHARACTERIZATION OF RICE SHEATH BLIGHT PATHOGEN ISOLATES FROM ARKANSAS USING RDNA-INTERNAL TRANSCRIBED SPACER SEQUENCES - (Abstract Only)
Singh, P., Jia, Y., Cartwright, R., Lee, F.N., Eizenga, G.C. 2003. Molecular and pathological characterization of rice sheath blight pathogen isolates from arkansas using rDNA-internal transcribed spacer sequences [abstract]. National American Phytopathology Meetings. P-2002-0676-AMA/
MOLECULAR CONTROL OF THE RICE BLAST DISEASE - (Abstract Only)
Jia, Y. 2002. Molecular control of the rice blast disease. [abstract]. National American Phytopathology Meetings. P-2002-0669-AMA.
THE RELATIONSHIP OF THE RICE BLAST RESISTANCE GENES PI-TA AND PI-TA2 - (Abstract Only)
Jia, Y., Wang, Z., Fjellstrom, R.G. 2002. The relationship of the rice blast resistance genes pi-ta and pi-ta2 [abstract]. National American Phytopathology Meetings.P. 2002-0670-AMA.
RICE BLAST RESISTANCE GENE PI-TA ASSISTED SELECTION FOR NEW RICE CULTIVAR DEVELOPMENT - (Abstract Only)
UNIFORM INFECTION AND DETERMINATION OF HOST RESPONSES TO MAGNAPORTHE GRISEA ON DETACHED RICE LEAVES USING SPOT INOCULATION - (Abstract Only)
RELATIONSHIP OF THE RICE BLAST RESISTANCE GENES PI-TA AND PI-TA2 - (Abstract Only)
PROGRESS IN IDENTIFICATION OF DISEASE RESISTANCE IN ORYZA SPECIES ACCESSIONS - (Abstract Only)
UNDERSTANDING MOLECULAR INTERACTION MECHANISMS OF RICE WITH FUNGAL PATHOGENS - (Abstract Only)
CYTOLOGICAL AND MOLECULAR CHARACTERIZATION OF RICE SHEATH BLIGHT PATHOGEN RHIZOCTONIA SOLANI - (Abstract Only)
ENHANCING DEPLOYMENT OF GENES FOR BLAST RESISTANCE: OPPORTUNITIES FROM CLONING A RESISTANCE GENE/AVIRULENCE GENE PAIR - (Book / Chapter)
Valent, B., Bryan, G.T., Jia, Y., Farrall, L., Mcadams, S.A., Faulk, K.N., Levy, M. 2001. Enhancing deployment of genes for blast resistance: opportunities from cloning a resistance gene/avirulence gene pair. In: Khush, G.J., Brar, D.S., Hardy, B., editors. Rice Genetics IV. Science Publishers, Inc., Enfield, NH. p. 309-322.
UTILIZING MICROSATELLITE MARKERS TO FOLLOW THE INCORPORATION OF ORYZA SPECIES DNA INTO CULTIVATED RICE - (Abstract Only)
MOLECULAR INTERACTIONS BETWEEN THE RICE BLASE RESISTANCE GENE PI-TA AND ITSCORRESPONDING AVIRULENCE GENE - (Book / Chapter)
RAPID DETERMINATION OF MAGNAPORTHE GRISEA PATHOGENECITY TOWARDS RICE - (Abstract Only)
RECEPTOR-LIGAND INTERACTIOS IN CONTROL OF RICE BLAST DISEASE - (Abstract Only)
UNDERSTANDING MOLECULAR INTERACTION MECHANISMS OF THE PI-TA RICE RESISTANCE GENE AND THE RICE BLAST PATHOGEN - (Abstract Only)
DIRECT INTERACTION OF RESISTANCE GENE AND AVIRULENCE GENE PRODUCTS CONFERS RICE BLAST RESISTANCE - (Abstract Only)
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